Difference between revisions of "Os05g0430300"

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(Created page with "{{JaponicaGene| GeneName = Os05g0430300| Description = Protein of unknown function DUF668 family protein| Version = NM_001062158.1 GI:115464046 GeneID:4338876| Length = 59...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0430300|
 
GeneName = Os05g0430300|

Revision as of 20:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0430300

Description

Protein of unknown function DUF668 family protein

Version

NM_001062158.1 GI:115464046 GeneID:4338876

Length

5969 bp

Definition

Oryza sativa Japonica Group Os05g0430300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21127627..21133595

Sequence Coding Region

21128229..21128537,21129314..21129633,21129780..21129872,21129952..21130042,21130883..21130970
,21131384..21131481,21131663..21131732,21131843..21131943,21132263..21132379
,21132473..21132549,21132647..21132691,21132772..21133285

Expression

GEO Profiles:Os05g0430300

Genome Context

<gbrowseImage1> name=NC_008398:21127627..21133595 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21127627..21133595 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggcctctgctcaaaggtttcagcggtagacaagtccccgagcgacaccacgcttgttcgggaccagatagttgatcctgagcctgccttgacaaagcgggctaagtcgcctgtggttgaagaggcaacggcgaagcgggtggaagaccagcagcagtcttttgcattcttggagagcgttgttcccgggcttgctgtttacaatggtgcagatgccggtcaggccgggtctaggacaccacaactggcccggactctgtcgcagaaggctggtttgggcaagactaaggccggtgctgcaaaggtttcagaagtgagctcccttttaggcagggctggcactgttggtcttggaaaagcagtggaggttctagatacgcttggtagtagcatgtcaagtttaaatactagcagtggttttatatcggcagcaaagggagataaaatatctattttggctttcgaggtggcaaatactattgttaaaggttccaatctaatgcgtgcactctcaaagaccaacataaagcacctcaaagaagtggtgctttattcagaaggtgttcaacaccttatatccaaagatatggatgaattacacaagattgcagcaactgacaaaagggaagagttagaaatcttttcaaaagaagttgttcgatttggaaatcgttgcaagaatcctcaatggcacagcttggaccgctactttgaaaaattggcatcggaacgaactcctcagcatcgcctgaaagaagatgcagaatcagtgatgcagcaattgattatttgtgtgcaatatacagctgaattatatcatgaattgcatactttggatagatttgaacaagactgtcgtcgtaaacagcaagaactggatggtttgggttcaagaggtgatagtctgcatatgctaaagcaggatgtcaagagtcaaactaagcatgttaaaagtctgaagaagaggtcactttggtccaagaatttggaagaggtgatggaaaagctcgtagacattgttcatttcttacatttggagatcaataatgcctttggcctcgctgacagtgaagcgccacaagaaccagctaaacaccacaatagattgggaccagcaggccttgcattgcattatgcaaatatcatcaatcagattgatactcttgtttctcgatcaagtttgatccctcccactacaagggatacactataccaaggtttgccactgactatcaaatcagctctccgttcgaagctacaatcctttgaactcaaagaagagcttacagcttctcaaatcaaagctgaaatggagaagactttgcgatggcttgtccctattgcaaataatacaacgaaagcacaccatggcttcggttgggttggagagtgggcaaatacaggatctgagctgaactgcaagctatcagggcagatggacttaacccgaatcgaaacactatatcatgctgagaaggaaaaggttgatggccatatccttgagcttgtcgtgtggctccatcatctcatcagtaaatccaaaaatgccaatggaggtgtaaggtctcccatcaagtctcccgtccgttcaccaacacaaaagggtatcaccttgatgccagacaagtcgaacagttcatcgccaatcctcacacaagaggataaggatatgctgaagaatgttaagttccggaaattcgtccctggaataagcaagagtcaagagtttgacacaaagtcaagacatagcaaacagattagactgataaagagcaacagtcaatctccaaccagtggcagtaggaaagacatgctttcactcaggagatcatccatgcttcctgtcatcgacttccagatggataggaccaaagctttggacttaatcgaccggcttgatggtctgaaaaaacaatga</cdnaseq>

Protein Sequence

<aaseq>MGGLCSKVSAVDKSPSDTTLVRDQIVDPEPALTKRAKSPVVEEA TAKRVEDQQQSFAFLESVVPGLAVYNGADAGQAGSRTPQLARTLSQKAGLGKTKAGAA KVSEVSSLLGRAGTVGLGKAVEVLDTLGSSMSSLNTSSGFISAAKGDKISILAFEVAN TIVKGSNLMRALSKTNIKHLKEVVLYSEGVQHLISKDMDELHKIAATDKREELEIFSK EVVRFGNRCKNPQWHSLDRYFEKLASERTPQHRLKEDAESVMQQLIICVQYTAELYHE LHTLDRFEQDCRRKQQELDGLGSRGDSLHMLKQDVKSQTKHVKSLKKRSLWSKNLEEV MEKLVDIVHFLHLEINNAFGLADSEAPQEPAKHHNRLGPAGLALHYANIINQIDTLVS RSSLIPPTTRDTLYQGLPLTIKSALRSKLQSFELKEELTASQIKAEMEKTLRWLVPIA NNTTKAHHGFGWVGEWANTGSELNCKLSGQMDLTRIETLYHAEKEKVDGHILELVVWL HHLISKSKNANGGVRSPIKSPVRSPTQKGITLMPDKSNSSSPILTQEDKDMLKNVKFR KFVPGISKSQEFDTKSRHSKQIRLIKSNSQSPTSGSRKDMLSLRRSSMLPVIDFQMDR TKALDLIDRLDGLKKQ</aaseq>

Gene Sequence

<dnaseqindica>603..911#1688..2007#2154..2246#2326..2416#3257..3344#3758..3855#4037..4106#4217..4317#4637..4753#4847..4923#5021..5065#5146..5659#ggcttgacctgctgcgccgccggagttgagtagactctgctactacttgcttcaccggctcaccgcaacagcacccagaaaaaaaaaaaagctctcctcgttcgtctcctcctcctccccttctcattcccaaaatccaccaaatcccggcagcaaggcgcgatctctggcgcttccgcggttcgcgcgatccccgatcggtccgcgccaggttcgttgctgcagcttttgacgctcaaattacagggaaaagatctcacatcttttgctgatgacgaattgtgcggcttggcttctgcaggggcgctggtttcatggattggagttgctgggacggctcttcgtgggaaccctcgtgctgacctgattcgtttgggcgtggttgatttgggtcttagtttttggtggactttgagtccctttgcgggtggttcttgtttgtaggctgtgattggggaatcctgggaggttgtaggaatgggattatctagattgctgtaaatagaggtgaagacaattcttttaggtactaatttggtgcacataaggtgagaattttggttaggactaggtggagatcaggattattgttagggaaggggatgggtggcctctgctcaaaggtttcagcggtagacaagtccccgagcgacaccacgcttgttcgggaccagatagttgatcctgagcctgccttgacaaagcgggctaagtcgcctgtggttgaagaggcaacggcgaagcgggtggaagaccagcagcagtcttttgcattcttggagagcgttgttcccgggcttgctgtttacaatggtgcagatgccggtcaggccgggtctaggacaccacaactggcccggactctgtcgcagaaggctggtttgggcaagactaaggccggtgctgcaaaggttggaaggatattcttatgccatttatttaacttacgatgaattagtccgcaatgtagcacatattgttaactgccagtgtgttaggtcgcagtgatatttgttattcctatggtgttatagagatatcaacagaatcgttatcgttcagttggtatataactatcctttgaccatttttaatctctgtatgcctctccttctgaagttggagcactcattgaccaaccatgattgtgagttgtgactagtggtaattactggcaaagtggcaattagttgcaattttcattacaaccataaaaagatctcacttactagctaaataccatctcagcatatcctgcatgtaagtaccaaaaacaactttcatgtcatctcatacagtaaactcaacagcgatctgcattgcttcatgcagaatctgttcattgttcccacactgtcccaaaactgttcttaattttcccttatttgaactttgaatggtctattgggattacttttctagtctgcatatgtttcaatgaaaacaatccagctattgttttgacaatggctattgtatatatatatccagaaaagatgcagttttaataatcctgttcttgttatgtaatttgacagactattccttattgtacatttcccttcaagtgctttgaaccttgattcgatgacagattttttatctaccattattaatttttcaatctatcattcttaatggttttaatctagaaaaaaatcagtcttaatgcttacttgctaaacaggtttcagaagtgagctcccttttaggcagggctggcactgttggtcttggaaaagcagtggaggttctagatacgcttggtagtagcatgtcaagtttaaatactagcagtggttttatatcggcagcaaagggagataaaatatctattttggctttcgaggtggcaaatactattgttaaaggttccaatctaatgcgtgcactctcaaagaccaacataaagcacctcaaagaagtggtgctttattcagaaggtgttcaacaccttatatccaaagatatggatgaattacacaagattgcagcaactgacaaaaggtaaataatggttttgtgctccccagtcttttctatcatgcccattataaatattatcctaccagatatgtatccaggttactgtactataacctttcttttaatgttgtaagttgtatcaagtgctaattgtttggttctaacagggaagagttagaaatcttttcaaaagaagttgttcgatttggaaatcgttgcaagaatcctcaatggcacagcttggaccgctactttgaaaagtgcagtttgatttctgccttgtatttaatgaaggtttattttaaggcactaatttattttttgtattgattatactagattggcatcggaacgaactcctcagcatcgcctgaaagaagatgcagaatcagtgatgcagcaattgattatttgtgtgcaatatacagctgtaaggattaacaaacccattagaaagattgcatatgctcacatttaggcagtctcaattcaaattttgcagccccaaagtaattttttagctctaaagtaacaaaaaaaaaaaaactttgtagcattctctgccagatttttttttctttttggctgagaatctgtgggtctttgtagttgttaacatttatatttgttccatagctcagagtttttgcaataggtttggtattttactgctacagtcctctgattctaaacgccattaatcctagaaggctagaacagatgaagaaacccttttggttttatccataatgaaatatacggttttatgcatcatgaaatacacgtttattaaataacttttgagtttgcaacagaacattatggtggaaaatagcactcattagtagtatctgcattcttttttgttttacatcctaacaatgggtacagtgggtatttttaacttggaccactaatattagtaatagtaacatacactagttcattcattcatgtcacaagaaaatgatactgatagatttgtcaccatatttctttgttagcatcatatccttaaatttcagtgtgcttccatttaattagaaacaaaaatgacctccaagcatggctatttgagactgtcgatgttggaaatgacaaagtagaggcagtagtatacttttatttggatcctaacatccttaataagattgagatttgttggtatttagcaccgtttgccttctgtgcactgattcgtgttatttctggacttctggttatagatttcacatcactgactcgcttctctttctttcttttctcctaggaattatatcatgaattgcatactttggatagatttgaacaagactgtcgtcgtaaacagcaagaactggatggtttgggttcaagaggtcagttttgtttctgttttatgaactgtacttaaactcatgtggcctgactgcactataaacaactttgtgtgtcatatgaaacactcagctccagttctttagttatttgaggagcaaggcggttatatatttatgctcccttttgtgaatatacagttatagttttctagttcagtaattcttatgttgtcatctatcagactactgttcctttcctcaaaatattatccccatggtagtcctttaatttttcgttttgatgaataaaagttaaaacatagaacttaccatgcacgtcaaggatttgtaagtagaattaaaattaccttacttgtaatgactgtatggataaattgatattttgactttgtttctaatgaactaaggtagaaatttctgttcattttcaggtgatagtctgcatatgctaaagcaggatgtcaagagtcaaactaagcatgttaaaagtctgaagaagaggtcactttggtccaagaatttggaagaggtttgtagtagtttctttgtttataaaatgttggttcaaggaaggcattgggtactacaacgagtacatgtttgaacacaccgaccgcactacgcacatattctattgtcatatcattctttaaatttttagtaaaaaaaaccattctttaaatgctgaaaaatattatgcttttccacaggtgatggaaaagctcgtagacattgttcatttcttacatttggagatcaataatgcctttggcctcgctggtataattttattgtcacgttcttcgcaaaaggcttcataattattagcattacataattatatttgttgtgacaatgatatagaagctcttgctactatctgactgcagacagtgaagcgccacaagaaccagctaaacaccacaatagattgggaccagcaggccttgcattgcattatgcaaatatcatcaatcagattgatactcttgtaagttcacaaaatctgcttaacattctaaatttttaattactattttgtcatctagaagataaatcaaccaatatttcaacaccagcaatgtcatgagttgccaatgcaaatatacatgacaagtcccatgtatgagtatagattctgttagagaattgagccttacttttacgatgatcgtaaatcaattgtaattttcttatgaaatataatcaatagcaatttgcaatatttcaatctcaaccatgtataccaacttcatgtggttattgcctgttggcaaacaatatcttaacgaggattgatcaactggcaggtttctcgatcaagtttgatccctcccactacaagggatacactataccaaggtttgccactgactatcaaatcagctctccgttcgaagctacaatcctttgaactcaaagaagaggtatgctaggcaggttaacacttgcagattgctattattatgagtgtacatatatgtctgacatgataacatggttgtgctaaatggatgcagcttacagcttctcaaatcaaagctgaaatggagaagactttgcgatggcttgtccctattgcaaataatacaacgaagtaatatatcctatccttgcatgcctgtgacctcattacttacaattgcaaaaactatccatttcttactgagaatatgattgtctgttcaccccagagcacaccatggcttcggttgggttggagagtgggcaaatacagggtttgtgtctgactacaaacgttttgaataaaaatgaagaaactattacttctcagtgacaatctgattattctatgcagatctgagctgaactgcaagctatcagggcagatggacttaacccgaatcgaaacactatatcatgctgagaaggaaaaggttgatggccatatccttgagcttgtcgtgtggctccatcatctcatcagtaaatccaaaaatgccaatggaggtgtaaggtctcccatcaagtctcccgtccgttcaccaacacaaaagggtatcaccttgatgccagacaagtcgaacagttcatcgccaatcctcacacaagaggataaggatatgctgaagaatgttaagttccggaaattcgtccctggaataagcaagagtcaagagtttgacacaaagtcaagacatagcaaacagattagactgataaagagcaacagtcaatctccaaccagtggcagtaggaaagacatgctttcactcaggagatcatccatgcttcctgtcatcgacttccagatggataggaccaaagctttggacttaatcgaccggcttgatggtctgaaaaaacaatgaggaatcatgaagctgtttaagaacatgaacctgaaaatgggcagtcgtttgtctatcttgaaatccatagccccagcaaagatgtcgaaaattggcgttaaactgcagcaatgccgcccgtctgaggtgaagaacaagcagtatgccaattgccaaacaagcagtacgcccgtcttggcgctgtgagtaatcagttgtagctaaaaattgtatcatataccttgtactgaagaaaaggaactgatgtacaaaacatttctttagttgattctgcctgtacaagaaatgcaagtttgttctttgttttaac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0430300, RefSeq:Os05g0430300