Difference between revisions of "Os08g0282400"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
GeneName = Os08g0282400|
 
Description = Similar to Alpha-SNAP (Fragment)|
 
Version = NM_001067981.1 GI:115475699 GeneID:4345167|
 
Length = 5499 bp|
 
Definition = Oryza sativa Japonica Group Os08g0282400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:11101731..11107229|
 
CDS = 11101867..11102011,11102890..11102939,11103029..11103101,11104469..11104548,11104701..11104852<br>,11106000..11106159,11106233..11106280,11106465..11106545,11106864..11106944<br>|
 
GCID = <gbrowseImage1>
 
name=NC_008401:11101731..11107229
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:11101731..11107229
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgggggaccacgaggcccgcggggatgacttcgagaagaaggcggagaagaagctctccgggtgggggatcttcggctccaagtacgaggacgccgccgacctcttcgacaagggggccaactccttcaagctcgccaagaactggagcagagctgcacaagtgtacatcaagattgctaactgccatttgaagggtgacagtaagcatgaagctgcctcagcttatgtcgaggcggcaaattgctataaaaagttctctcctcaagaggctgcacaagcgctaaaccaggctgttgatcttttcttggaaattggtagattgaacatggctgcaagatattgtaaggacattggtgagatatatcatcaagaacaagatttagagaaggcttcagattacctggaaaaatcggctgatctttttgacagtgaggggcaatcatctcaatcaaacagtatcaagcagaaagttgcagaaattgctgctcagttggaacaataccagaaggcaaatgagatatttgaagcaattgctcgccaacaaatcaacaataatcttcttaagtacagtgtcagaggtattctcctcaacgcaggcatttgtcagctatgcagaggtgatgttgttgctatcacaaattcaatggagcgatatcaggatattgacccaacattctcggggacacgagaatacaagcttttatctgatcttgctgcagctatggaggaaggagatgttgccaagttcactgatgccattaaggaatttgacagcatgacacgtctggacccctggaaaacaaccctcctcctcagggcaaagaatgagctgaagaaaaaggaggatgacgaggatgatctaacctaa</cdnaseq>|
 
AA = <aaseq>MGDHEARGDDFEKKAEKKLSGWGIFGSKYEDAADLFDKGANSFK                    LAKNWSRAAQVYIKIANCHLKGDSKHEAASAYVEAANCYKKFSPQEAAQALNQAVDLF                    LEIGRLNMAARYCKDIGEIYHQEQDLEKASDYLEKSADLFDSEGQSSQSNSIKQKVAE                    IAAQLEQYQKANEIFEAIARQQINNNLLKYSVRGILLNAGICQLCRGDVVAITNSMER                    YQDIDPTFSGTREYKLLSDLAAAMEEGDVAKFTDAIKEFDSMTRLDPWKTTLLLRAKN                    ELKKKEDDEDDLT</aaseq>|
 
DNA = <dnaseqindica>137..281#1160..1209#1299..1371#2739..2818#2971..3122#4270..4429#4503..4550#4735..4815#5134..5214#aacctcctctcctcttctcgccttctccgcttctcccttcccatctgctgctcgcgaatctcctcgtcgtcgtcgtcgtcgtcgtcgtctcctcgccgccgggagaagcgcagggcggagcgcggaggcggaggcgatgggggaccacgaggcccgcggggatgacttcgagaagaaggcggagaagaagctctccgggtgggggatcttcggctccaagtacgaggacgccgccgacctcttcgacaagggggccaactccttcaagctcgccaagaactgtgagtccccccactcccagacgggttccttcctccccaatccaaccccccctcgcgcgctgctccgatcgatcggcgtaggggcgatttgtggttcgttttcctgtgagatctgcggctcgatcgggcgatggggtcgccgggtttggcatcatcctgcttggtgtggggttaggactggatctttggctgcggatctagcaacctgccgcgtaatttggcgcgatcctttgatgcgcgaggcgtggttggattagtgaggcgcggttttaggggatcttttgtaatcgcaaaggaggagtaggttgattgttgttttgttagcggatgttatcggatttgatcccaaaatatacgcagatggtggcgtcttatcggttactgttaagacactatttggcaatgatgcaagatgaactgaaaattatatgctgaacttaattccatgaatcaatcgacatatgcaactgttgtttaatccattgtttcaaactaacaatagggtgtgttcattagacttaaggttcttgcatgggatgcaactcaaactaacaataaactcttaactggtatctaatccaaatacaagtctctatgtcttaatgtgcattgttggacgttagaaacgatgtagcggtctggtctaacatgatggatatatagtgttgttatagtacatcatgactcttttgcttacattcgacctgcatctttccagtttgttcttttagcatttgcatgtctgataattttttgtcgtgataaactcaagcatttatttcactatattgtagtaagatggtttagttactacttttgtctttgagagaacacacccttattcttgcaataattataaccttttttttttgttgcagggagcagagctgcacaagtgtacatcaagattgctaactgccatttgaaggttgccttttatttggtctatcagtttgtcaacttcattgcacggcaatcgaatatgatacttattctgcttgttccttttctgaacagggtgacagtaagcatgaagctgcctcagcttatgtcgaggcggcaaattgctataaaaagttctctcctcaaggtactttctacaacttcaagcatgagcgcatctttaatttctgtgattttttatccttctctctacaatcaccattcagttgcacattgctaaattaaaatctgttagattaaagttgtatttgacatagaattcttgcttctgtttcatatacaactttagcggttaattggcgctgttataataatctagacacctatgacatagatctatcatttttcctccaattaacatgtaatttatagttcctgagagtgaacgaagttgctccttttagcattctcttagtaagatagttagatagacgtgaaacagtatgttgcactgtttctcttctcatttgagtacggaacatgtggttcacttatgttgtacttacaagatgggtaccccgtgtgttactgcgggagaattgtgtgataatataatatatatgaattctaaaattttctttcttatctactatataattttttttcatgtttttatatatttttgtacctttatcaaatatccgaaagttataaatgattgggttgtaaggtgtgccttctgggggaaagagatgtaatttgcaccttgatgaatcatccaaatgctaaaacaaattgaggtgatgtgaatagaagcaatttacacctttgatgaatcatccaaaggctaaaaacaagtgaggtgatgtggtttcatgagagaagagagaattagcatattaactacatttagtggggatgaactttatagatatataggattctgatctgataagaactgttccctttcaacctgtgttagcaatagaattttttaattctgtattcataatgacaagtaaaatttttgttgaatttaaatctatggaatggagatttatttgttgcattctaatctgactaactcaaaacatgtagtctacttttcatggttctaaaatttcactgggcatttgtgatgatatagcaaaaactagactttttgctatcacttgctattgaaaacttgctatgccccataaaacagggagattaaaggactaataaggtgattaagcataaataccagcatatcttgtttgaatctaaaatttaatgtagtgacagtgtgtttgttttgaaggactacagtttgggagattcaaattgattatttttaatgagcctatattgcttctctaacattaagtcatttaaacaattaaaaatagtgaaatttaatagtacaatttcatttcagttacatatccttgaccacctatgcttcttagtctttctgtgatttgatttgtgtttgatttctccctgtaaaaatatatttacgtcagaatggtagatagctgcctttattaacatcgagtccattctatgcagaggctgcacaagcgctaaaccaggctgttgatcttttcttggaaattggtagattgaacatggctgcaagatattgtaaggtgaagtatcatttcatttttctatgcaaaaagattattatttcaataatgattggtatgcctggatgatgacttgtttcaaaatgaagcaccatttttttccatttggaatctgtcatgctgatggtggtgacaactttatgcatcttcaggacattggtgagatatatcatcaagaacaagatttagagaaggcttcagattacctggaaaaatcggctgatctttttgacagtgaggggcaatcatctcaatcaaacagtatcaagcagaaagttgcagaaattgctgctcagttggaacagtaagatccaacttaattaggttcatagcaattttctaatttttaatctattctacgaggatttgtttcaaacatggtatgttaattaagctgccaaagttgatatgaatgctttatctcaatgaagcctgcaaccctgcaccatgccccttcctttttcattactttaacaacaaataaacagctagtttgacttgtacattagtcttgcgtattgcgtggtctatatttcctgtgggtgatgtgatagcattttctcgtttatcgacctcttcagtgttttgttgtatctcttgacttttttatttttttattgctgtattcatacggtggtagttgctgaatattttattaacatctgagtcatcccagttagattgagggtgaaatactgcagaatagctggtcaaaagaaagaccacattggtacttcaggaactataggaattggtttattctgcattgcaggcagaagaaactcttacctcacccattaaatctaatctccttaagtatagtgttttgccactaacgaacttgataatactgcatgtagtctggactaagtgatcttatgcatgaatagtgaactacttgatgctgaataaaacaactaatcttatccctaggcgagcctgtaggtgttggccagcttctggtggtgttgttatgcacaaagtttaaatgtgacagggttcaatacatggttggaacagattagcacagtataggagacatggtttctgggatgtgttctgagaggaaataaagcgctcttcaaattactattttattgtctcatctaaccccactaccactcaagttgcaattcatatgacaccaacttgcattccatttatggtgcaaaattaggcagaaattctgtactccatggaaaactacacatcctaaagcttgatttccttgttttctaacggattgatgcagatgtgggctttgattctactgacggattggtgcagatcttcccattctctgttgtagttctttttccttgttttggtttctgttagtaacttctgttcttaatatgtgtttgttaggcaaattaacatcatgaaataattaacatgaaacaagtaaatctttgtttttgagatggtaactcgttcatattttatttcagataccagaaggcaaatgagatatttgaagcaattgctcgccaacaaatcaacaataatcttcttaagtacagtgtcagaggtattctcctcaacgcaggcatttgtcagctatgcagaggtgatgttgttgctatcacaaattcaatggagcgatatcaggtgtgtactattttgttaaatcttagtggtattatcattgtcatctttctaatgatgtttaactatgttgcaggatattgacccaacattctcggggacacgagaatacaagcttttatctgtatgatacagtgcttattccttctctttgcacacttttttcactccttgtattcattgcatgccaggctttataagcaatatttttgcactagtgaacatgaagtgttaggtcattactctatatagtaaacgtaactatattctttgaaggagcttctgggtctgaatatttttttctgcaggatcttgctgcagctatggaggaaggagatgttgccaagttcactgatgccattaaggaatttgacagcatgacacgtctggtatgttcagttggtggatgacttgtctatgatattgcaatccagtaagcccgtgctacataaaagtataaaaataagcaacctaaaccacattcgctaggctcaagctgcaccaactgatgtatggatattcagccatgttgataacattttctatgatgagtcatgtattgcttctgctgtacaagtttgcatacatcttttcactggttgctgttggcattgttatttcaaatagtgcttcagaagtgatattgtgcacgagatctgcttatgtgttatctagtttctcatttatatacctgatacttatttcaggacccctggaaaacaaccctcctcctcagggcaaagaatgagctgaagaaaaaggaggatgacgaggatgatctaacctaagttttgttgtaaagctcgtttcatgcttaatatggttgcctcctttgcattctggaggctccatgttccatatgatgagcatgagagctgtcgtttgccctgttgtatagaactccttccagctatcatattggatgtttggttgccctggttcttttctggccaccacctgatttgccgtcagtgtttaaactagtaccctacgtgtgttgctgataccttatattataacatgtttgtttcacctgctttcgtcatgatatttattcatgcactttacacacc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067981.1 RefSeq:Os08g0282400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 13:00, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information