Difference between revisions of "Os08g0382400"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
−
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
−
GeneName = Os08g0382400|
 
−
Description = Peptidyl-prolyl cis-trans isomerase, cyclophilin type domain containing protein|
 
−
Version = NM_001068230.1 GI:115476197 GeneID:4345443|
 
−
Length = 3789 bp|
 
−
Definition = Oryza sativa Japonica Group Os08g0382400, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
−
 
 
−
  ORGANISM  Oryza sativa Japonica Group
 
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
−
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
−
AP = Chromosome 8:18108087..18111875|
 
−
CDS = 18108156..18108272,18109352..18109636,18109798..18109997,18110560..18110795,18111056..18111198<br>,18111306..18111377,18111478..18111705|
 
−
GCID = <gbrowseImage1>
 
−
name=NC_008401:18108087..18111875
 
−
source=RiceChromosome08
 
−
preset=GeneLocation
 
−
</gbrowseImage1>|
 
−
GSID = <gbrowseImage2>
 
−
name=NC_008401:18108087..18111875
 
−
source=RiceChromosome08
 
−
preset=GeneLocation
 
−
</gbrowseImage2>|
 
−
CDNA = <cdnaseq>atggcggcggcgctcgcgttccccacctgctgctgctgccgccgcccctcgctgcgtccttccgcgggtcgccgcggccgtcgccccgtcgcccgctgcgcgctcccctcctccgagaattcatttagctggaaagaatatgcaatttctgtagcattatcggctggattaatcactggcgcaccaacgttaggatggccagcacatgcttctcctcttgaaccagtgatcccagatgtttcagttttgatctctggacctcccattaaagatcctggtgctttattgagatatgctttgccaatagataataaagctgttcgtgaagttcaaaaaccactagaggatatcactgacagtcttaagattgctggtgttagagccttggattcagttgaaagaaatgtaagacaagcatcgagggcactgagtaatgggaggaacctaattcttggcggtcttgctgaatccaaaagagcaaatggggaggaattattggataaattggctgttggacttgatgagcttcaacggattgttgaggacagaaacagggatgcagtagctccaaagcagaaagaacttctccagtatgttggaactgtagaagaagatatggtcgatggattcccctatgaagtgccagaagaatacagcagcatgcctcttctcaaaggaagggctaccgtggacatgaaggttaagattaaggacaatcctaatttagaggattgcgtatttcggattgttctggatggatacaatgctcctgtgactgctgggaacttcttagatctggtggaacggaagttctatgatggcatggaaattcaaagagctgatggttttgttgttcaaactggcgatcctgagggaccagctgagggatttattgatcccagtactggtaaagttcgtacaatacctcttgagttaatggtcgatggtgacaaagcgcctgtatatggtgaaacacttgaagaacttggccgctacaaggctcaaacaaagcttccttttaatgcatttggaacaatggcaatggctagagatgaatttgatgacaattctgcttctagccaaatcttttggttgttaaaagagagtgagctaacaccaagcaatgccaatatactggatgggcggtatgccgtatttggatatgtcaccgagaacgaggactacttggcagacctcaaggttggggatgtcattgaatcgattcaagttgtctcaggcttagacaacctcgccaacccaagctataagattgtaggataa</cdnaseq>|
 
−
AA = <aaseq>MAAALAFPTCCCCRRPSLRPSAGRRGRRPVARCALPSSENSFSW                    KEYAISVALSAGLITGAPTLGWPAHASPLEPVIPDVSVLISGPPIKDPGALLRYALPI                    DNKAVREVQKPLEDITDSLKIAGVRALDSVERNVRQASRALSNGRNLILGGLAESKRA                    NGEELLDKLAVGLDELQRIVEDRNRDAVAPKQKELLQYVGTVEEDMVDGFPYEVPEEY                    SSMPLLKGRATVDMKVKIKDNPNLEDCVFRIVLDGYNAPVTAGNFLDLVERKFYDGME                    IQRADGFVVQTGDPEGPAEGFIDPSTGKVRTIPLELMVDGDKAPVYGETLEELGRYKA                    QTKLPFNAFGTMAMARDEFDDNSASSQIFWLLKESELTPSNANILDGRYAVFGYVTEN                    EDYLADLKVGDVIESIQVVSGLDNLANPSYKIVG</aaseq>|
 
−
DNA = <dnaseqindica>70..186#1266..1550#1712..1911#2474..2709#2970..3112#3220..3291#3392..3619#tttcccacctccacctccacctcccccttcccttctcgccaatctcacttcatcctcctcctcccatcaatggcggcggcgctcgcgttccccacctgctgctgctgccgccgcccctcgctgcgtccttccgcgggtcgccgcggccgtcgccccgtcgcccgctgcgcgctcccctcctccgaggtgagcgaagcttcttgcgattctttccttttagttgcgcgagcgggatggcttgggtgcctgcattggtgggagccggatggatgggtttggggtggatttctggtgcgcggcaatgtgggtcaatcggtgtggttggtgggaatcgaattagaattatcctacctgcgttgtactatatacgagtattgcggtatctctgtggtggagggggcttgtttactttactgccaggggtacaagtattcagatgttaatgcacacatgattaataacctaatggcctgagagcaatgtattgtggttcttgcaagattttagtttgttcatgtggggacgcttctgcgttgccataagttttcagctcccagtcagcgtgagactgactgacaaggtttgagattttcctctatgtaaagttctgcatgtgcgtttgcttagtgttgcgagttgaaaattgggtgaaaacagtattatagacatgatacgtagtaaaactgttagatgatgcagagttttatagctgcaaatttggaaagtgaattgttgtgtgtccaaactccaaaggattgaagtgcgaaacattgaattttattaagtaactacgatatttttctttcataattgcagctaaacctttttcttttgcgaaagattagatttagttggcaaactttcctatgcttgttcttggttgtagcaaatacggaaccatccaggcatccagtaagattggtaattctgtttccataagctattcttactgactgctgttgtcctgcatgtttcatgtgcgacctaagcttaggaaggtaaaaaatttgttgatggtatgcagcttgtgctattatacgaatgaaaatattttctcctttgcattcataatcatgtgtaaaagttggctatgttcctttcgttcaaatagttgcatttattttctgttctgcccttgtaaaacaacaatttccttcattatcggtacggataaagtttcatactgtgatacctctagtcagatggtttggttctcttttactttgttaatttattctaattttttaattcaattcttgcagaagaattcatttagctggaaagaatatgcaatttctgtagcattatcggctggattaatcactggcgcaccaacgttaggatggccagcacatgcttctcctcttgaaccagtgatcccagatgtttcagttttgatctctggacctcccattaaagatcctggtgctttattgagatatgctttgccaatagataataaagctgttcgtgaagttcaaaaaccactagaggatatcactgacagtcttaagattgctggtgttagagccttggattcagttgaaagagtaagtcatccttttgagctgccgattagaaatggtctaggttttatctagaggacaatgcattcaataactgaaagcagccaccttttatttcaactctcttgaatttacttactcacttgggctactggaaatttataatttttttcttcaaattttagaatgtaagacaagcatcgagggcactgagtaatgggaggaacctaattcttggcggtcttgctgaatccaaaagagcaaatggggaggaattattggataaattggctgttggacttgatgagcttcaacggattgttgaggacagaaacagggatgcagtagctccaaagcagaaagaacttctccagtatgttggaacgtgagtgaacataactcctcaaaacaattatatgtaattgtttgtctttccattgctaatgtatggagtagtagatgttctgaccacaggaggctgatagatacaacaatcctattgcctgacttgttttaagagaaaaggcaaactagatgttttcccacctgccattctggggatcaaacccgggtggtgcatttcagccccacaccttcactactggggacattgacaaattgttatggtttgctgaacaaaagttcttgtgaagtgataactctttagtgctacagaactgaattatgtcagccactaaataaaataattgtgatcactcttacggaaaggctcttctcgtactttcaccactgaggacattgacaaaatgttctggtttgctgaacaaaagttcttgcaaagtgataactctttagtgctagagaactgaattatgttagccactaaataaaataactgtgagcactcttatggaagggctcttctcatttataccttgtcattgactctgcagctgagatcttcctgggacattgcatttctgcagtgtagaagaagatatggtcgatggattcccctatgaagtgccagaagaatacagcagcatgcctcttctcaaaggaagggctaccgtggacatgaaggttaagattaaggacaatcctaatttagaggattgcgtatttcggattgttctggatggatacaatgctcctgtgactgctgggaacttcttagatctggtggaacggaagttctatgatggcatggaaattcaaagaggtaaggttgcttctgtgatacattccatagatatagtccaacattgtttataccaatcaccatttttaattgcattttgataaacatgtagtagataatcttgatagtaactagcaagctcgttttactgactaagccatggcattacccattttttcaatgaagaagcctctctagttgttctctgttatttaggattgagaagtcagaaccttaattatctagtgagcttttgttaactattatcggttcttttgcagctgatggttttgttgttcaaactggcgatcctgagggaccagctgagggatttattgatcccagtactggtaaagttcgtacaatacctcttgagttaatggtcgatggtgacaaagcgcctgtatatggtgaaacacttgaagtaagtaggcacagttctttcttttttcagtttcagaatctaccggaaattttggcaactgtatgttgatgagcttgttcttacagtacacatgatcatgcattcaggaacttggccgctacaaggctcaaacaaagcttccttttaatgcatttggaacaatggcaatggctagagatgtaagtatcatgatactgcttcagtgtaatgtatcaagcatctgcagatatgggcatgcttcagcattttctaacattaaacgtttgaatatcatggcaggaatttgatgacaattctgcttctagccaaatcttttggttgttaaaagagagtgagctaacaccaagcaatgccaatatactggatgggcggtatgccgtatttggatatgtcaccgagaacgaggactacttggcagacctcaaggttggggatgtcattgaatcgattcaagttgtctcaggcttagacaacctcgccaacccaagctataagattgtaggataaaatgtttctttttttcaggagttccttgataggcaattattttaccatattgaaatcagtgtaaagtgctataatctctaaccctcatctcatgaccttctatgttttgtgagttttgcaatatgcgggattcaatattacttgaaagtaaagacgttcatcatttgtct</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068230.1 RefSeq:Os08g0382400]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 8]]
 
−
[[Category:Chromosome 8]]
 

Latest revision as of 13:03, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information