Difference between revisions of "Os08g0482100"

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==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
GeneName = Os08g0482100|
 
Description = LETM1-like domain containing protein|
 
Version = NM_001068602.1 GI:115476941 GeneID:4345857|
 
Length = 9175 bp|
 
Definition = Oryza sativa Japonica Group Os08g0482100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:23922304..23931478|
 
CDS = 23922443..23922492,23923082..23923580,23924149..23924240,23924818..23924982,23925064..23925451<br>,23925522..23925640,23925772..23925844,23925922..23926127,23926217..23926261<br>,23926367..23926448,23927457..23927645,23929746..23929849,23929916..23930006<br>,23930344..23930472,23930672..23930803,23931026..23931196,23931419..23931478<br>|
 
GCID = <gbrowseImage1>
 
name=NC_008401:23922304..23931478
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:23922304..23931478
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcgacggcggttgggtcgcagccgcgcgcggccatgtgcggtgccagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcagaagtgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctatttcaggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaatttaggagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggcttctcaagatgatagcagtggtttatctgttaacggatccccacaagttgattcggcaagcgagatggatgatataagggtgaaattggttaaagcactacaaagcgaggatataagcactggccttgtccaatcaatacatgatgctgcaagatctattgaattggctttcttagatcacagcaaatcatcaaaaaactcttggtttccaaaggaatggcttggtgtggataacaatgaatggataaaaccactctcttaccaggctgctgtcggttcattgttgcaagcagttattgatgtttcatctaggggaaatggcagagatagagatatcaatgtatttgttcagaggagtttatcccgcctacttagttctctagagggtgctatccaaaatgagctgtcgaaaagggaacctacattgtaccagtggtactcatctgatcaaaatcctttggttgtgagaacatttgttaactcttttgaaaacgatccacggtttaactctgcaacagcaatatgccatgaacgccagcaaatgaatactagtgaaagtgacctttctctacttatgctaggtttgacatgtcttgctgctatcacaaagcttggatcaacaaaagtttcttgtcagcagttcttttccatggtccctgatatcattggtcgattcatggatatgcttcttgaatttgtccctctaagtaaagcatataccttgacaaaagatattggtcttcagagagaattcctttgcaattttggtcctcgtgctgctgaccctaagttttccagtgatcgtgaagttgagatatcgttttggattgatctggttcagaaacagttgctacgggctcttgatcgtgaaaagatatggtcaagattgacaacaagtgaaagtattgaggttttggaaaaggatttagcaatttttgggtttttcattgctttaggcagaagtacgcaaacatatttgtcttccaatcatcttaccaatctggatgattcaatcaatgatattgtaaggtatcttattggtgggagtgtgttatattatccacagttgtcttcgattagttcttatcagctgtatgtggaggtagtttgcgaagagctcgagtggcttccattttacagtggtgatgtgccagctgcaacaattgaaggtagagaggatgtgcataaaggagaaataatatcaagagtgctaaatgtgtgctcttattggatgactagttttataaagtacagctcatggcttgagaacccttcaaatgtaaaggcagccagatttctgtccaaggggcattccatgttgagtgattgcatgaaggaactggacttaacaaagtatgatatgccaaaagaccaaacctttccagaagccaaagaacacttggttgctaggacagagctagcctcttttgacaagtcacttgaaagtgttgaggaagctttggttaagttagaagatttgctccaagaattgcatctctccagttccaactctggtaaggaggatctaagggctgcatgttctgatcttgaaatgattagaaggctgaagaaagaggctgagtttcttgaggcttcctttcgagcaaaaacagaatttcttgaggctgatgctagtagcagaccattatctcctgctgtcgaggaaggccgtggaaagacagctagcaatgctaatgagagctcaacaccacaaaaaccagcaaacagagtggagaacaaacgtcgtccaatttgggacctctttggtaggccttctggaaggagagttcagcttgtccaacaaacttcagatcaaaatgtttctgtcgctaatgtggataacaaagacacacaatcaaatgatatcctccggtttgaacagttaagacgtgagctgattgagttagagaaaagagttcaaaagagcgcagataatgctcaaaaggaggagacatatgtcgcaaatgaaacattggattcttccgtgtcatcatctcctgtatcaatgccttctggtccagctagcaagaaagaaaatgttattaccaaatcagtagagaaggttaaggaaaccacgacgactgttgtgcaagggacacagctcttagcaattgacacaggagctgctatgggtttgttaagaagagctcttattggggatgaactaactcataaggaaaagcaggctcttcaaagaaccctgacagatttagcctctgttgttcctataggaatactcatgcttctgccagtaactgctgttgggcatgctgctattttggctttcatccagagatatgtgccttccatg</cdnaseq>|
 
AA = <aaseq>MATAVGSQPRAAMCGASTSKIYTLEKVYGFRLVCRSVVDLRSQK                    FHTRVYKRKSYFRSSASECEKIIHSARWLEFRRQRVAFQRTRRTIHLIPLASQDDSSG                    LSVNGSPQVDSASEMDDIRVKLVKALQSEDISTGLVQSIHDAARSIELAFLDHSKSSK                    NSWFPKEWLGVDNNEWIKPLSYQAAVGSLLQAVIDVSSRGNGRDRDINVFVQRSLSRL                    LSSLEGAIQNELSKREPTLYQWYSSDQNPLVVRTFVNSFENDPRFNSATAICHERQQM                    NTSESDLSLLMLGLTCLAAITKLGSTKVSCQQFFSMVPDIIGRFMDMLLEFVPLSKAY                    TLTKDIGLQREFLCNFGPRAADPKFSSDREVEISFWIDLVQKQLLRALDREKIWSRLT                    TSESIEVLEKDLAIFGFFIALGRSTQTYLSSNHLTNLDDSINDIVRYLIGGSVLYYPQ                    LSSISSYQLYVEVVCEELEWLPFYSGDVPAATIEGREDVHKGEIISRVLNVCSYWMTS                    FIKYSSWLENPSNVKAARFLSKGHSMLSDCMKELDLTKYDMPKDQTFPEAKEHLVART                    ELASFDKSLESVEEALVKLEDLLQELHLSSSNSGKEDLRAACSDLEMIRRLKKEAEFL                    EASFRAKTEFLEADASSRPLSPAVEEGRGKTASNANESSTPQKPANRVENKRRPIWDL                    FGRPSGRRVQLVQQTSDQNVSVANVDNKDTQSNDILRFEQLRRELIELEKRVQKSADN                    AQKEETYVANETLDSSVSSSPVSMPSGPASKKENVITKSVEKVKETTTTVVQGTQLLA                    IDTGAAMGLLRRALIGDELTHKEKQALQRTLTDLASVVPIGILMLLPVTAVGHAAILA                    FIQRYVPSM</aaseq>|
 
DNA = <dnaseqindica>140..189#779..1277#1846..1937#2515..2679#2761..3148#3219..3337#3469..3541#3619..3824#3914..3958#4064..4145#5154..5342#7443..7546#7613..7703#8041..8169#8369..8500#8723..8893#9116..9175#ccgctacttccctcccggtataaaccctatccctctccgcctccggcccatcgctttgtcgcgacgcgcgcgcatcgatcccaccgccggcgagggcgagcagtagcggcggcggcggcggcggcgggggcggaggctgatggcgacggcggttgggtcgcagccgcgcgcggccatgtgcggtgccaggttgggtcccccccccacccccatctcctctctctccttctggccgcggtgctgcgggccgattcgctggtttagtcgttgccgtttagctcgtgggtggatgggttgcggtggaatgcgctggttgcgagcttggattgtggaggggaggggtagaggtagtagggtcgttgaattcgtcactggctcactaagttatctgtgcgatttcggttcgggggcgtgcgccgccgagggatttcgtcaaatttggtgttgtaggttgccgttttggtgatggcgatagcattgcggttttgacggccggagctttgacatggccaattgaactgggatactttactactagtagtttcctcttctgttctgttgaggcttgcagttatgcacacggtgtgtttcccgtattgtgctttcagtggcaatttgacggcggatgcttattcctaaaacagtagcttgccagcgtttcttaaattgtttgctactggttttgattatggaataggtttcattgtacagtgaagttaataatatttttcttgctgtttcttattataatggatcaaatggttgaacgtgtttgcagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcagaagtgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctatttcaggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaatttaggagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggcttctcaagatgatagcagtggtttatctgttaacggatccccacaagttgattcggcaagcgagatggatgatataagggtgaaattggttaaagcactacaaagcgaggatataagcactggccttgtccaatcaatacatgatgctgcaagatctattgaattggctttcttagatcacagcaaatcatcaaaaaactcttggtttccaaaggaatggcttggtgtggataacaatgaatggataaaaccactctcttaccaggtacaggactgaactttcttcaggcatatatctgcccataaaatgatagtgaccattattcatgtcattgattaaatagtttctcttgacttttcccttttggccttccacgcagaaaactagtattgaaattttgtaagccagattttattgcatgcaccctactgtttccctttttttgtttagaaaaagaaaagatgatgtagtcaggatatcatccatagaggtcttatgaaatatggatgcctgtatagatgaatatgtatgttgaacttggtaaactattaattggttagcttttgttcaccccttttaggatattagtagtgctactctgccaccagaggaagtgttctgctctggtgtctggagtattattttcatatatgaagatgcagagtcttttaatcaacttagagccaatcgcggcaattgaaccttctttgagttgatgtttattagttctcacacataaatcttcagtaaaacaaatattagctgttgcgttctgaattttggtggcatgcaaactttttattgtctggtatctaaaataatctgtttgcaggctgctgtcggttcattgttgcaagcagttattgatgtttcatctaggggaaatggcagagatagagatatcaatgtatttgttcagaggaggtctgccctctagcacttgccttgattatcatgcctaattgctgacattatcctttttctcctggtgtgtttttaagactacaactatctatcatcttggagccaattttgctttttaataccttagagagcaaatggtgtgtaatgtacattttatgtagcttcctctgtatattaagttttcttggagctaattcctgtctcataagttgctttccatctatagcctaattattagagaaatatattcctccatttcttgactggtagatttcttaagttttaatgtcaataaaacatatgctgtcagaagagcatgcaaattaattgatccacttgattcatgggaaaaaaaagttactgctagagtctacaggtttctgctgtatttgcatttttgttgacccagaatgagccttctactggattcaatagtcaagcttacatgaacatagtattgacagcatgatgaagccaaatcagatctaacctctatgttgtacataacagttcaatttgtgattatagaacatgcctcttggtctcctatttaatcatatttaattttctgttgcagtttatcccgcctacttagttctctagagggtgctatccaaaatgagctgtcgaaaagggaacctacattgtaccagtggtactcatctgatcaaaatcctttggttgtgagaacatttgttaactcttttgaaaacgatccacggtttaactctgcaacagcaatgtaagttgtttacttctgttgggcttcatttgataaatgaactaatacattaacggataccttttcttttgttgcttgcagatgccatgaacgccagcaaatgaatactagtgaaagtgacctttctctacttatgctaggtttgacatgtcttgctgctatcacaaagcttggatcaacaaaagtttcttgtcagcagttcttttccatggtccctgatatcattggtcgattcatggatatgcttcttgaatttgtccctctaagtaaagcatataccttgacaaaagatattggtcttcagagagaattcctttgcaattttggtcctcgtgctgctgaccctaagttttccagtgatcgtgaagttgagatatcgttttggattgatctggttcagaaacagttgctacgggctcttgatcgtgaaaagatatggtcaagattgacaacaagtgaaagtattgaggttggaacaaaagatatttcgtctagctttatgaattctccttccaaaataactattttccttactgcaggttttggaaaaggatttagcaatttttgggtttttcattgctttaggcagaagtacgcaaacatatttgtcttccaatcatcttaccaatctggatgattcaatcaatgatattgtaaggtgtgaatgatgcgaattttgaattgccatttgctcgatgaaattatgtttctgtacataagctacagtataactgttttcttgcgtaattatgatgtagctctcaccttaacaagcttacaatcatccaggtatcttattggtgggagtgtgttatattatccacagttgtcttcgattagttcttatcagctgtatgtggaggttagtatgcaggcaatacaccgagctctcaatgctatgcaccttttttgtgtttttatgaccttttcaccttccaggtagtttgcgaagagctcgagtggcttccattttacagtggtgatgtgccagctgcaacaattgaaggtagagaggatgtgcataaaggagaaataatatcaagagtgctaaatgtgtgctcttattggatgactagttttataaagtacagctcatggcttgagaacccttcaaatgtaaaggcagccagatttctgtccaaggggtacatccaaattcagtcatgctctctcacattttgccgcagatatggatgcgaaccaacgtttctaatatatggtcaaatttttgtaggcattccatgttgagtgattgcatgaaggaactggacttaacaaagtaaacatataattctgatgtttatattgttatttgttatgttacttgggtatatgtttgtacaattgtaagaatattattatttatctgctcattctgatgcaggtatgatatgccaaaagaccaaacctttccagaagccaaagaacacttggttgctaggacagagctagcctcttttgacaaggtatctgttacatgatgcactttaacgttactagtatttcttctggttctcacacatcccaacaatagtaattctcagtactgttagttaaattattattttttgtgaggagttagttaaattattgtgcatttgacatgttccaagatgatgttgctgatatcagtgctaaactgctaattatattatagtttcttcatggaacctatatgccagtttcagagggaagcggtggtgcatgtgtgtgttttggggttttgttttggtgtggtgggagggggtggagggtgggatggatggtgagaggccttatattctcatggctgttgccagaatattggtgtggacaagaaatatgactagtggacttatgttatttctctgtaagcaaacaataagatgttaagattgctttcatgagtagcccctaatgagaatatataatatttggtgaaaaatagccttgttggataagggtaaactgtgaaagaagctccaagcaacttgatgcactgctggcactatgcgaaacatcattgcaggcctcatgctgatagtaactcccggccataacactataagctcagacatcaaattcattacgatgcaaggctgcacatgcagggagatgccaccgtctccttttgatatgcttacacattcaaagcgtgacatgtattagatgtattctgagatatgcaagagatgaaggattgatccatttaatgtatatctgtttacaattaataactgtacaagatcatatgttagatgtgttttttttttaaaaaaaatatttttcggactgttaagttatatgcatttttatgttctcaattagacttgccatttgccaaaaagcttatggtcagtcttacttatgtttgtgcttagttgtgtatgcttgttttcagtttacaatggcaatttgaacaaatgctaatttaattacttctgaatatatattgtagtggtgaaaatttatgaagttagtctcaataattgcagtcacttgaaagtgttgaggaagctttggttaagttagaagatttgctccaagaattgcatctctccagttccaactctggtaaggaggatctaagggctgcatgttctgatcttgaaatgattagaaggctgaagaaagaggctgagtttcttgaggcttcctttcgagcaaaaacagaatttcttgaggtgagcttaattatcatacaaccttttactagcctgcatttcatctggaaaaggaattactacaagtatgtggacactttaatttctccatcataggactcaggagagtgcattccaataactgcaatggctattaagggccagctatttctcaataatagaaacaacatcctcaatgactgaaataacaattgtcacatgtatagattagatggccctagacccaagcaacacaaccatgctgatgaccaggggccacactacatgggctatggatgattacctagtccaaacacttatgattatttcttgcttaatctgattaaaatccagatatatttttaaatagggcagcattaaccacgcaacgagccacatatcttatctccttatcttaaccaactatacatgttctgcatccagctgcctcatgcttcctaagctcctgttgggctgttcatgacattccattggctgtaaggcctcttgccttgatcacatctccaataatgggtgtatcatggaacttcacccttcctttctagctgtttgtcctcaacctgcagggtggtgaccagttgcaccccttgaaatctccacggtgaagaggttgcagtgtgggcatcctgtcatgtgagagcaccaagctgtcaagatcacacagactgtgcttctgaaggttgtcaatgtatctaccatggccggttgctgcacctctaccagctacagtcacaagatcaacaggtggtgcagtcatgccaaaaagtcttcattggcatgccccatggggctagcgcttttcaagtcattgatgttgtcagcatggaagtcgctggatggtgaagtgttgaaaccacatcagggctgcctttttggcgtccatggggcttgcaagttgatggcaaagccagtagttgtgctagcgataaagtgaatgatagttgcagccgttctgatggtggttttgttgatctttggtgttgcctggtagggctgactctttctgcaccagctgtggtggttgacgccaacaccaaattatcacatgccctgattatatggccctggacccaagcagtgcaaccagctgatgactgacaacatcaccacaagggcagggatatacgagagtaggaagtcttgaaatatatttctccttagtccttaatgatggcttggcttatttagaccacctcctaacatgtgctaactaatacagtataacagttacattcctaacagcttcactaactaatcctatctttactataaagttgatgcccactaactcctaaagctcaacatgcaagtgtgccacatcatcgcatactagcaattatcatccagagtattttaaatcacatgcaagtggacccactagcagttattatctagagtattttaaatatcatgcaaacatgacatatcatttacaattttgttgtatttttagaactcaatatgcaagtaatgtcaaatcattatctccacatcattttcacattatttaaacatgtacatctataatctataatttctataatgaataacatgcatttatccacttatcccgcaacaaagcgtgggtaccaactagttacctaaagataacatccgcttcaaataaactgataacaactaaagataacacaagtggaaagtggtatcatctccttcaacgtcagcctcctgacgctccagttggccatgcattcacgtagatatgttgcacattttagatatttaaaaccgagatattatttctttagggacattctgttgatataatttaggttcttctactcccccgagagtagtttcattgggtggactgtttaagttttgtttactgtgtttaaactttaaaggtgtgtcagttctccttccactgattaacatggttgacattttacacaacgaagttagttgattccatgtagaaccaccatatttctaagattcccacccaatatttgataatgatttttttttggtaatatgtttgtgagtcaacataatagaggttccatatgttctacttggtacaactgttcattactactatgatggctatcctaaagttttctgatggtcaattaggctgatgctagtagcagaccattatctcctgctgtcgaggaaggccgtggaaagacagctagcaatgctaatgagagctcaacaccacaaaaaccagcaaacaggtaacattctgctgtagtttctgtgatttcagggtggataataaccgctattgtttttttcaccagagtggagaacaaacgtcgtccaatttgggacctctttggtaggccttctggaaggagagttcagcttgtccaacaaacttcagatcaaaatgtatgcgttctgtagcatgcattactgtgcatttaataattttcaaacaacaatagggtaaaacaatagaagctgccatcttgcaatgaatatttgagctgtccttttagcaattatatttcgagcaaattttttaggtgttgtatttaacaatgatggggatcacaaaaatcatcaatgattagtgatttattcttactaacagtctctctgtatagtatataatagttgcggaagcatgtattctgttcttgagaacaacaccattgatgcaaagatatcttgttgcaccatgttcttacttaacagattttacctctttttttttctcataaaggtttctgtcgctaatgtggataacaaagacacacaatcaaatgatatcctccggtttgaacagttaagacgtgagctgattgagttagagaaaagagttcaaaagagcgcagataatgctcaaaaggaggtatgcttcttaatatatgctttctaaatgttgacatgaatgcacctggtatttgagttagcacttaagcaacaatgctggacagagtactttattctgagttatgtgtttcatatgatattctcactattgcttttgaccataaatgcacatccgttttcaattttgaagaattatttattgttttgtcattttccaggagacatatgtcgcaaatgaaacattggattcttccgtgtcatcatctcctgtatcaatgccttctggtccagctagcaagaaagaaaatgttattaccaaatcagtagagaaggttaaggaaaccacgacggtaaggccatttacattttcttgaaaatatatttggtattggccctacataatttaattagttgccatgaagcctttgtgccaccagggcgcatcatcatatttgaatgcttccattactgaaatccagaatgcagctctcctccatatttgagggaaaaaaaatgtctagaatgcagacctgcaacttatttcctttttctctatttttttccctacacagactgttgtgcaagggacacagctcttagcaattgacacaggagctgctatgggtttgttaagaagagctcttattggggatgaactaactcataaggaaaagcaggctcttcaaagaaccctgacagatttagcctctgttgttcctataggaatactcatgcttctgccagtaagtatttgttgtacttcgatttacccctcctgaacaagcataaagccttctaggcccagactgttgtttatttcaattttggtttcagaagcctgtcttctttacttcatccacattgactaaagataaccagtcatgttttttagttagtgaactttaatgttcagtgcaaatatcttcatggatacagcattgtaaacaagttcataatgttcccaggtaactgctgttgggcatgctgctattttggctttcatccagagatatgtgccttccatg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068602.1 RefSeq:Os08g0482100]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 13:07, 14 May 2015

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