Difference between revisions of "Os08g0504600"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
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GeneName = Os08g0504600|
 
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Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein|
 
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Version = NM_001068715.1 GI:115477167 GeneID:4345972|
 
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Length = 8122 bp|
 
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Definition = Oryza sativa Japonica Group Os08g0504600, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
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AP = Chromosome 8:25026721..25034842|
 
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CDS = 25026975..25027124,25028422..25028522,25029657..25030035,25030756..25031601,25032229..25032286<br>,25032468..25032535,25032611..25032717,25033513..25033600,25033995..25034252<br>|
 
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GCID = <gbrowseImage1>
 
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name=NC_008401:25026721..25034842
 
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source=RiceChromosome08
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008401:25026721..25034842
 
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source=RiceChromosome08
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggaggcggaggatgccgccggcggcggcggcgacggaggccggtacttcaaggccgacctcaccggcgccggcgtcgtccagctcagcgagcgcgtgcgggagaagctgcgggagttcgtggacgactacaccaacaacaccctcgtggagtacgtcattttgttgctcgaaggtggaaagcgcaaagatgaggccatcaaggagcttgatgtatttctgggaaaggatagtcgcgcctttatttcctggttgtgggatcatttatctgtaaatttgcacctttatgtgcaaacacaagaacaactgcaggtggataataaggatgacgaagccccaaatgaactacctggagaacagaaatcgtcagagttgcagttgagaagcaaagatcaaactcatcctgagtgtgtaagtgaacccagtacaaccagaagtcggactaaaagggattggaaaggaattggtcgggagggtaatgaaaactttccacttagaagtgtactgaaggatattttgcatggtgaggagaaaaggtcgcaaaaggttaatgaaatacgacatcccccatcgtctaatcaacggaatggcagaaagcgtgacagggatgacgaaccgcaacaaataaagagagacttgcctttgcgccgtgacgttggtgcctcctgccgtcttctaaagtttgctgttcgagatgctgtgaaagctgtacagcaaaccagcagctctacggaaccatcttctaagcgcctacgttctgtggtttccacatcatctgcagacagcctgcatggtaaaagaatagaaacatctacagagggccacctgtatgacaaaaagccagaaagaactaggcaaattcttcaagtacctggagctgctttagctctcagagctgccgcagaggctgctgcagattctaccaaagttagatctactggaagcgtgtttagtcgattaggccaagggaatgctgtgaatcagacaccccgttctcgtgaacagcagagagattacgaagatttcaaaccagctacaactgcagatgatcatgattctgatcgatacgataatgatgatgagatatccggagacataacattagaagatggggaagctgaaatgaatgttgattctacatctgatgatgatgttagcagagatgatggaatcactagatatggaagttccgattcacaagtagctgcttacccttcagttgtggagaagaaagatgttttcgtgaaatgcagtgttgaaccagagaccagtacaatgaggcattcaaacttgattaaggaggagcaaccaggttctttgtcagtaataagtatgagcaaaactgtggttgtcccagttaatgccaacaatctggaaccttccaattatgagacaccaaaagatgttcatgttgtagagaaaacggacattacacccatgaatgctactgttacctctctgactagtaatatcaaagaactagctcatggagaagtccaaaaggattcacagcgatctgcaattgcatcatctgttacgagttcatatagcactgcacacccaactgaggacgcagactctagaaccctctatgttagcaatgttcattttggtgccaccaaggacgcgctatctcgccatttcaacaagtttggtgcggtgctcaaagtagttattgttactaatgcagcaacagggcagccaacaggatctgcttacgtagaatttttacataaagaatcagctgaacgtgctctttcattgaatggaacatcattcatggcacgcatcctcaaggttgtcaggcgaagttctcatgaagctgcacatttttatggttggcctggtggtgggcgaacatcaatgtatgccaggcatggtagaatggcatacccaaggggtggcctccctggtagcaccttcagagggcgtgctccaatgatagctggtgctagaagtttacaatggaaacgggagccttcagttactgattcaaatacaggtgcaaccgtggcactgccttctgctgaacaggtgcttcctcctgccacatag</cdnaseq>|
 
−
AA = <aaseq>MEAEDAAGGGGDGGRYFKADLTGAGVVQLSERVREKLREFVDDY                    TNNTLVEYVILLLEGGKRKDEAIKELDVFLGKDSRAFISWLWDHLSVNLHLYVQTQEQ                    LQVDNKDDEAPNELPGEQKSSELQLRSKDQTHPECVSEPSTTRSRTKRDWKGIGREGN                    ENFPLRSVLKDILHGEEKRSQKVNEIRHPPSSNQRNGRKRDRDDEPQQIKRDLPLRRD                    VGASCRLLKFAVRDAVKAVQQTSSSTEPSSKRLRSVVSTSSADSLHGKRIETSTEGHL                    YDKKPERTRQILQVPGAALALRAAAEAAADSTKVRSTGSVFSRLGQGNAVNQTPRSRE                    QQRDYEDFKPATTADDHDSDRYDNDDEISGDITLEDGEAEMNVDSTSDDDVSRDDGIT                    RYGSSDSQVAAYPSVVEKKDVFVKCSVEPETSTMRHSNLIKEEQPGSLSVISMSKTVV                    VPVNANNLEPSNYETPKDVHVVEKTDITPMNATVTSLTSNIKELAHGEVQKDSQRSAI                    ASSVTSSYSTAHPTEDADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATG                    QPTGSAYVEFLHKESAERALSLNGTSFMARILKVVRRSSHEAAHFYGWPGGGRTSMYA                    RHGRMAYPRGGLPGSTFRGRAPMIAGARSLQWKREPSVTDSNTGATVALPSAEQVLPP                    AT</aaseq>|
 
−
DNA = <dnaseqindica>255..404#1702..1802#2937..3315#4036..4881#5509..5566#5748..5815#5891..5997#6793..6880#7275..7532#ctcgttgcctcccctccctgcctacccccatctccacctccgcctccacgcgtcgccgccgccgccgccgccgccgccgccgccgtccgggcagtcgaccgctgcggcgccgtcggagctccccgggccccgtggatgagagcggcgcggataaggtcgccgcgggcccgcttcgtctgcacccgtctcggccccgggaccccactgggctggatctaggtttggcgaggggggttctggaagcctccgccgcgatggaggcggaggatgccgccggcggcggcggcgacggaggccggtacttcaaggccgacctcaccggcgccggcgtcgtccagctcagcgagcgcgtgcgggagaagctgcgggagttcgtggacgactacaccaacaacaccctcgtggtacgacgccgccgccaccgttctcttcccttcccttcccttccctcctctcgcgcatcgttggcgctccgctcggtgtgcgggcagtgtagtgacgccgttcgtttgtggtttggattatatgcttgcaacttcgggattttagtctagttttgagcgccttttgtagtggtatgccgcggtttgtgtgagatatatgcctgtgcggaggagctaaaattttgctaaactttcatgtaacctagcccgaattatgccgctgcgcgctgtgtttaatgtttggtcctctgctgttagtgtaatcactcataattgccgtaagatcccgtcttctttaaatatgttgggtgtgttcgcttcctggaggtttggttgggttggaacgaaatgttgtttatttgctctaatgtagttgggttggaacggaatgttttttatttgctctaatgtagtgcccctgtatactgctgtgctttgtttaattgaatccagtcggtctaatggtgccagaagcactagaatattgtgtagttacctgaaacatgtcccaaaaaaaaaattctaaaatgggagcataatgtactgccgctccattgcttttcttaggagattcttttcgcgaggtgatcactgattagatgctaggagcctagaaattcttaaagttccttttttatttttgccatgtatggatggatattttggtctaatctagttaagtttatttatttaatactaggttaggagatcgatatctcctttcaagaacatgatcatgcagtgtagcaacaaagattacattatctcatacttgacttgtgattagtcaagttcccatgggtgctttccattttagttcttattaacacgccatttattttctatttccctttccccatccatcaccaaattttcttaaccagatttgctattttgacctcatcttcttgggcacaacactttactatccaaaggtgaccaaactgtgataagattgctgcatctcctcattgtggttatagcatttatgcaggaatctgctgctaggttttcctctacctttaattaatgacaccatttttaatcatcgtgggtagaattgacatattctgtctgaggaagcatcctgcaatggcatggaatacattgctttcagcacattgtattgccttgaattcattttattcattttcttacacactagaatgctaaataccatcctttaccttttctatgttacactgaaatgctcctagagaaagcaataagtgtacctctgttgttgttttaagtgcaggagtacgtcattttgttgctcgaaggtggaaagcgcaaagatgaggccatcaaggagcttgatgtatttctgggaaaggatagtcgcgcctttatttcctggttagttcacatgtcatatagattgaattcttaattttttggcatcaactatgttgttaaaccaacctttaatatatttttgcatttgtgcacagcgttctctatatttttgaactaatgcatgcctagcaatttactcctagactatgcaatttactcctttggtacttaggcaaattgatgttttgcatacatttaaccatcaaaagcatttataacatctggttagaggggcgtatgaaaatatgccacatcccatggagtataattttcctgctaaaagtaaccctgcagcatggctaggcgcatccatccacataagcaaagacatccatgccgatatggttgggctgctgcatgacccaactaaatcacattatgggtttaggccacgctcttttttagaggatgaatttagctgagtagctgcacgcaaaatgagaaatgtgattagtatatgattaattgtgtattgattataaaaaaattgaaaaataaatttatttcatttttgaaagcacgttctatatagaatttttgaaagcacactatttagcagtttgaaaagcgtgctaatgggaacgaggcgtagataagctcaaatagcactttagaaaaggcccttagataaacttgtttggaagtacatggatcaagatcaaccatctgcaagttcaagaacttgccatgtaactctttaatcaaatcgcaaatcatttgtgactgagcattggaaaagaattaaaaaaaatgtttttgatctttgcattggttttttaaataaattttgctactttaccattcgtgtgaagtggagaggttgactgtagtaaaaacgaaaaacactttttacctggattatttctgtatataatttgcaaggactacaatatattataattacttgttaaacctgaaactggtttgtatctactgattaatttagcctttgtcatttgcccatacaagcagttcaggttacagagactgtttcttgcctgaatccatcatttcttgtgcatacttctcataccacttcaacaaaatatccagtccagaacaataaacaatccttgcttatttacatgcatattactttatcaagtgtaactgaataccatgtctttcatgtaggttgtgggatcatttatctgtaaatttgcacctttatgtgcaaacacaagaacaactgcaggtggataataaggatgacgaagccccaaatgaactacctggagaacagaaatcgtcagagttgcagttgagaagcaaagatcaaactcatcctgagtgtgtaagtgaacccagtacaaccagaagtcggactaaaagggattggaaaggaattggtcgggagggtaatgaaaactttccacttagaagtgtactgaaggatattttgcatggtgaggagaaaaggtcgcaaaaggttaatgaaatacgacatcccccatcgtctaatcaacggaatggcagaaagcgtgacagggatgacgaaccgcaacaaataaaggtgtgtgatgtgataataggagatgcataatgcttgtgttaaccaaatggattgactgaaacactctgctgtcttgcatacttttttaatgattcactttttcattaacttgctttgtgttgcagctaaacatttaattgtttatacttctctaaattgtgcaatggaagattccttttaacacactaaatatgaacttttatagcatcagcacaggattataagaggatagtatcatgttagttgttaaaatgaaggtgcactgcgattttccacattccctatttgaactatacactacattgcaacaaacgttctttgcaactgatgaattaacaatttttcatctcatgaatatgcatatgtgggctctagctgtttgtgttttctgcaatacttcgcaattagaatgaacaactagctgatctagttattttttcatgtttctaagtgttggggaaatcaccaaatagccaatacagtctatgtatgtactatctacctgaaatattgttggttttctgctctaaaattttcataagggaatgttagactgcagtttagttcagcccctcaattttcggtacgactggaagcattcattcttaatgtctctactggagacaatgttttctttagcctttcattttcattgtttaaaattaattatgcaaaattcaaaacatgtcatttaccaacaattcttttctttattgccagagagacttgcctttgcgccgtgacgttggtgcctcctgccgtcttctaaagtttgctgttcgagatgctgtgaaagctgtacagcaaaccagcagctctacggaaccatcttctaagcgcctacgttctgtggtttccacatcatctgcagacagcctgcatggtaaaagaatagaaacatctacagagggccacctgtatgacaaaaagccagaaagaactaggcaaattcttcaagtacctggagctgctttagctctcagagctgccgcagaggctgctgcagattctaccaaagttagatctactggaagcgtgtttagtcgattaggccaagggaatgctgtgaatcagacaccccgttctcgtgaacagcagagagattacgaagatttcaaaccagctacaactgcagatgatcatgattctgatcgatacgataatgatgatgagatatccggagacataacattagaagatggggaagctgaaatgaatgttgattctacatctgatgatgatgttagcagagatgatggaatcactagatatggaagttccgattcacaagtagctgcttacccttcagttgtggagaagaaagatgttttcgtgaaatgcagtgttgaaccagagaccagtacaatgaggcattcaaacttgattaaggaggagcaaccaggttctttgtcagtaataagtatgagcaaaactgtggttgtcccagttaatgccaacaatctggaaccttccaattatgagacaccaaaagatgttcatgttgtagagaaaacggacattacacccatgaatgctactgttacctctctgactagtaatatcaaagtaagtagcttcatattttaaaccaatcaaattttattagtaactgcttagtaactgcactatgtttaccatttctgcatacccactctgattattttgcttaaagttttacttctatttttaaaaaagtatcatctaagtaagtatattggatatttgcatgtgataactatcgctgatttcccatttgactggaatagatgagaagcaaggctgacagatcgtcgagtgaaaacacattattaaatgatttgtcactactttcctctattggattgaactgggttggttagtggtttgcaggattagtttattgtgcttttatctcttcatggccagctgaaaaggccgatgcagattggttcacatcaataatgcttggaatgagaaacctatagctacttcacttgcatgttccattgattcagactacttactgtattagcttgcttctatattttgttaatacacaggaaatattttacattctttagctgttacttatgcctaattactgagtaattgtttgttccatttggtcacattccttgtatttagctccaatgctttaaaattatttaggaatcttcaggtagattttatctgactgttgagaaaaccactcaggaactagctcatggagaagtccaaaaggattcacagcgatctgcaattgcatcatctggtatgtgacataactcaaaatcattttagcatttaaaattgtttaattcaaaagtcaaagcataatgctgaactagcactctgatgtaaattcccatcagaaacaatcatcaggacggaatgtttcaccttatctcactattgtttattgcacaatataatatatctgtccttccttgcagttacgagttcatatagcactgcacacccaactgaggacgcagactctagaaccctctatgttagcaatgttggtatctatgtcttctcatcacacatggtttcttgtcctatattcttatacctttgtcaattttatttgaaggttcattttggtgccaccaaggacgcgctatctcgccatttcaacaagtttggtgcggtgctcaaagtagttattgttactaatgcagcaacagggcagccaacagggtactctttcatatgctaattttgctgagaagattttttttgctgttttttttatcttatatacgtaaatgccatgcaatatcatggtggtttttgagatgttgagtgatggaacatgtctagtgcaaatcagccattaggtgctattgtgcttatatcttcaactttgaagtcaacttcacatggtctaaaaaacttgagttatatctctcttcatttaacatgaaacttaaacttcagatgcaactaggaacaaccttatatctgtaccgtcagtagagcttggactgatttcatatggtgttaaatctcacccaggagtacctttggcttggtattcaaatcaaaaggtttttacatgtagaactcacagattggtgatagcagtttatatgtcatatatctccataggaaaaattgtgaatactacatccggcccaaaaaataagcttctggctttaatcgttttatgcaaactgaggaaaatattttgagtaaatataaatggcatcgcaggcattaaacttgcgtcgtgtttcattagatttatgatatttagaactcaatacttatgcaattttcttatcattgctcgaaaactatgttgctctggtcataactgagtgaattactcttgcaagtttaagaatctaaatgccatgctttcaacacataagtttaacatccttgcaagttaatgaagtaggctacaataaattagctatacttaaaatctgaagtcggccattctcatctcctaaatagaactcatgcctttttttttatccgatacagatctgcttacgtagaatttttacataaagaatcagctgaacgtgctctttcattgaatggaacatcattcatggcacgcatcctcaaggtactatggtcaatgaccaagctttgtccttttactttctactccctccatcccaaaatattgtaacctggtactggattattggacacaacttagaactacaaatctggatagagcccatgtccagattcgtaatactaggttgtgtctaatctagtacttaggtagctatattttgggacggagggagtatctctctctactgaaaggggagtttgaatatagagcacaatcctcctaaccaaattcagagctcatccaccttatgtttctgaattagtattccgtgaaactgttgcacaaaaggaacttgctatcactctattgctttactggttgatatattgggttgccttggagctggtgatatttcatttgtttttcccttgtacaggttgtcaggcgaagttctcatgaagctgcacatttttatggttggcctggtggtgggcgaacatcaatgtatgccaggcatggtagaatggcatacccaaggggtggcctccctggtagcaccttcagagggcgtgctccaatgatagctggtgctagaagtttacaatggaaacgggagccttcagttactgattcaaatacaggtgcaaccgtggcactgccttctgctgaacaggtgcttcctcctgccacataggggagatgaattatagtttatatgatgagaaccaaattggtgcctagcccatcatacagcatattagaatcagcataataagcttggaagatggtttatggaaaaaaatgctgctttgtaaaaaaggctaaaagcaggaaaatacaaaaaaagagaagaaaataagaaaagaggaaggagtttggagccagaatttgataaaccaccatgctgatacttggaggtggttgtattggagatcaatgaactgtcgtcacattgagcaaacagttttcttcagtcatctgaaaggacttgctgagatttgaaataacttccatggatgaggatcaattgtcaaatagagcatttgagggctagtttttggacatggcatttagtcggtagtctgggctcttcatcattgtaagctccgactgtacagcagtctatctatttgtactcttcttagaaccagtccctttcccaacaaaaaaaacagaaaaaaagaaaaggaaaaacatctctctttgtttcttttttgtttttttattgaacatagtactgttttatacttttattccttaatgtattgatataattttttagtt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068715.1 RefSeq:Os08g0504600]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 8]]
 
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[[Category:Chromosome 8]]
 

Latest revision as of 13:09, 14 May 2015

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Structured Information