Difference between revisions of "Os05g0467400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0467400| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001062327.1 GI:115464384 GeneID:4339055| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0467400|
 
GeneName = Os05g0467400|

Revision as of 20:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0467400

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001062327.1 GI:115464384 GeneID:4339055

Length

3345 bp

Definition

Oryza sativa Japonica Group Os05g0467400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22983116..22986460

Sequence Coding Region

22983142..22984366,22985130..22985239,22986119..22986133

Expression

GEO Profiles:Os05g0467400

Genome Context

<gbrowseImage1> name=NC_008398:22983116..22986460 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22983116..22986460 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctgctgctccgccgcctcgccggcgccgcagcgggccgccatctccgccgcgcgctctccacggccgcgtcacgccctccgtggcgcatgatcctaaccgaggcggagctggacaggtcaggggcgccgtcgcggagcgcgcgggcgtccttggacctcgtcgagcccccgcgctcctcccgcctctccgtccccgcccacttcgtcaaccccggccccctcccggacgccgaaggggacgccgtcggcttcgtcggctgggtcatcggcggcagcggcgacgggctcctcctcctcaagttctacgacacccgctaccacgcccccgtcgtcgccaacgtccgcctcgccgtggcgctccagctgtccaggacgacgagcgagggcgtcctcgacccggacgtcgcgcacttcgtctgcaacccgctcagcggccagatgtaccgcctcccgcccgccatcgagaccaccaagtacagcacggggcgcggcctcctcacccgatccgagtcccggcacgggccgcccgacaggtacgtggtcgcggagctcaccaggggggagtccgggagcagcgtgctgcgccggttcatgtcggagaccgaggagtgggacgatgtggcgacggtgcggtcctcctcgggctcggagagggcggcggcggccgagcgggtgatgcacctggaccaccaggtggtggccttcggcggccggctgtggtgggtggacgtgagctggggcgccctctccgtcgacccgttcagcgaccggccggaggagcgcttcgtcgagctgcccaagggcagcgtactgccggacctgaccggaattggggggagacggattcttggcttgtatcggcggatgggggtcagcgaggggaagctccggtacgtcgaggtgtccaatgcgaagaagccgttcgtggtcagcgcattctcgctcgacgatgagggcagcagctggacgctggagcacaggatggagatcaccccaagctggaagggtgagctcaaggtgcccgagaagccgcggatcggcgccatcgatccactgaacgccaacgttgtgtacctgatattcctccacgaggttcttgccgtggacatggccaagggcgaggtgattgggaggagttctcctgatgacgtcaactctagttcagttgtgccatgcatcctaccaccgtggctcgaatcatgtcagatcccctctgcagcaaccctttcgagcaagaagactgatgttgaaagaaatactctggcagacacactggttgtgtggatagaggcagttaaaactgaactgcatcagtcgattcatcttttggttccttgggactga</cdnaseq>

Protein Sequence

<aaseq>MSLLLRRLAGAAAGRHLRRALSTAASRPPWRMILTEAELDRSGA PSRSARASLDLVEPPRSSRLSVPAHFVNPGPLPDAEGDAVGFVGWVIGGSGDGLLLLK FYDTRYHAPVVANVRLAVALQLSRTTSEGVLDPDVAHFVCNPLSGQMYRLPPAIETTK YSTGRGLLTRSESRHGPPDRYVVAELTRGESGSSVLRRFMSETEEWDDVATVRSSSGS ERAAAAERVMHLDHQVVAFGGRLWWVDVSWGALSVDPFSDRPEERFVELPKGSVLPDL TGIGGRRILGLYRRMGVSEGKLRYVEVSNAKKPFVVSAFSLDDEGSSWTLEHRMEITP SWKGELKVPEKPRIGAIDPLNANVVYLIFLHEVLAVDMAKGEVIGRSSPDDVNSSSVV PCILPPWLESCQIPSAATLSSKKTDVERNTLADTLVVWIEAVKTELHQSIHLLVPWD</aaseq>

Gene Sequence

<dnaseqindica>27..1251#2015..2124#3004..3018#gactcctcctcgccggctttgggaaaatgtcgctgctgctccgccgcctcgccggcgccgcagcgggccgccatctccgccgcgcgctctccacggccgcgtcacgccctccgtggcgcatgatcctaaccgaggcggagctggacaggtcaggggcgccgtcgcggagcgcgcgggcgtccttggacctcgtcgagcccccgcgctcctcccgcctctccgtccccgcccacttcgtcaaccccggccccctcccggacgccgaaggggacgccgtcggcttcgtcggctgggtcatcggcggcagcggcgacgggctcctcctcctcaagttctacgacacccgctaccacgcccccgtcgtcgccaacgtccgcctcgccgtggcgctccagctgtccaggacgacgagcgagggcgtcctcgacccggacgtcgcgcacttcgtctgcaacccgctcagcggccagatgtaccgcctcccgcccgccatcgagaccaccaagtacagcacggggcgcggcctcctcacccgatccgagtcccggcacgggccgcccgacaggtacgtggtcgcggagctcaccaggggggagtccgggagcagcgtgctgcgccggttcatgtcggagaccgaggagtgggacgatgtggcgacggtgcggtcctcctcgggctcggagagggcggcggcggccgagcgggtgatgcacctggaccaccaggtggtggccttcggcggccggctgtggtgggtggacgtgagctggggcgccctctccgtcgacccgttcagcgaccggccggaggagcgcttcgtcgagctgcccaagggcagcgtactgccggacctgaccggaattggggggagacggattcttggcttgtatcggcggatgggggtcagcgaggggaagctccggtacgtcgaggtgtccaatgcgaagaagccgttcgtggtcagcgcattctcgctcgacgatgagggcagcagctggacgctggagcacaggatggagatcaccccaagctggaagggtgagctcaaggtgcccgagaagccgcggatcggcgccatcgatccactgaacgccaacgttgtgtacctgatattcctccacgaggttcttgccgtggacatggccaagggcgaggtgattgggaggagttctcctgatgacgtcaactctagttcagttgtgccatgcatcctaccaccgtggctcgaatcatgtcagatcccctctgcaggtatatcctcgtatgttcgatatgtttgagtattgaggtactatactgcaattgtaattgttaaattgcaccgagtattggaagtgcaggagttcactatgctgcaatcattggattgcacatacggttcttttgaaatcgcgtgcttgcagatttgagcaatttatggatttctgttgataaatacatacctgctgtatccgtattgtggtttctcaagggagtgcatctgtttgtcatcactgtagaaagagtcgagtttttctgcttcaaactatagcagcatgtctaatattgggattagatttatgcagagtttgcgaatttcgattttttcacaaggttttccttgattcctatcttctcaaatagtctaatgcagtactattcaaatgttccattgaagtggtgctgcgtagatgccctcaaattaagtggtgcactggtgctactgatatgttaagcagagtcaatcgtccctgataagacttacacttacacagtaaattgactatagcagtgatgatcatggacagatatcagcaccagaacttggtattggcagaagaacctcacatccttttgtcattggagtggaatgtctgttatgtaacacctatgttgttcatgtgtagttaatgcccgagtgttttgatgcaatgttcattgccaatgtcttttgcaattattggatacatacatcgttcctgtcgctatcatctctgtgctactattgttaaagttcttgtacacatggttgcagcaaccctttcgagcaagaagactgatgttgaaagaaatactctggcagacacactggttgtgtggatagaggcagttaaaactgaactgcatcagtcgattcatcttttggtatttttctcgtctaacttgtgtctgtgtacccttattttattatccattattagccgtatttcattgttctgtccggattactcatgcattatctgtagtcaatgcaatgggtaatggtttacttttaagaaacaattcgttcagtgtgctaattgttacatcctcagtagtctctcgtaattacctaatactcccggagaactgaattttgttctcctagcgtcattttttttactagagggggtatctcaatgctattgatgtttgtaatcccatattgtttggttgaattctttgttgttcttaaatgatagttgttacatttgtctgcctcctaaaattggcgttaccttttaaatcttatactcaaattgtggtgaagtacttgctctgttcatacatctgaagtgccagatgttagtgctgccgactgctgagaattgtcacttcgctaaaggatggtcactactgtcagaaccagcagacatgaactatctcaaacctaaagttactcagcgtcttaaccaatttcgccttcactgtcctcccgaaaattctataacccgttgatcaagagtaaactaaagcttgttgcctgctcctttactactagtagtcactagacaggttgtaatttttgcttcagtcaacacttagacatgcaatgccacatccttgactgatagagtaggaacaaaaccaaaaggatgctctggtttcagtatatttgtggttatactgaatcaactactttttttatcggatgtatccgaagagactgaatcaacttaatttgacaattgttcatttcatctgttctgttctcttctctgtttatgagatagggagactgatgtgtactcatctgctttgtaggttccttgggactgactggaagagatgttcgagagaacttgtttagatggtagcagtttcctgaagtacctgaactctcgtttttgggggatgctgtgagaagtttgggttttgatgcgcatttggactttgctggtccaacttgttgaatttcgttttggacaaacaccggggaatgttaacatattttcgtatttttccttttcttccatacctgttgaatggttaagtagaatgagtatctccaagtagaagctgggcatggtactcctatgaacccaatgtttgttttcaggacacttatctctcataagcatttaaactatcttcgcttgtaagacg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0467400, RefSeq:Os05g0467400