Difference between revisions of "Os09g0246200"
(Created page with "{{JaponicaGene|
GeneName = Os09g0246200|
Description = RpoT1 (T7 bacteriophage-type single subunit RNA polymerase)|
Version = NM_001069194.1 GI:115478127 GeneID:4346491|
L...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0246200| | GeneName = Os09g0246200| | ||
Revision as of 20:55, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0246200 |
|---|---|
| Description |
RpoT1 (T7 bacteriophage-type single subunit RNA polymerase) |
| Version |
NM_001069194.1 GI:115478127 GeneID:4346491 |
| Length |
11758 bp |
| Definition |
Oryza sativa Japonica Group Os09g0246200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:4021753..4033510 |
| Sequence Coding Region |
4022324..4022434,4023142..4023245,4023348..4023462,4024244..4024291,4024419..4024508 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:4021753..4033510 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:4021753..4033510 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccctcctccccaactccggccaccgcaccaatctcgtgttcgccatctcctcctctccacctccacctcaccgcccgccgccaaaccctagcgccccccatgtggcgccgcctccccgcccgccgcctcgcctccgccctcctctcctcctccgccccgctgccccaccctctccaccgcagcctcctcctcctcctccctgccgcctcacagcgtctcgcgccgtcgcagacgctgccgcggttcgcgtcctcctccgccgccgtcgccgccgagtccgtctcctccgaggaggtcgacgagttgcaccacgcgatcggggagatcgcccgcggggacccgagcgtctccgccccggctccggcggcggggcaggaggggcataggaggaggtccgggagagggaagcactcggccgaggctatggcggttccggcggcggggcaggaggggcataggaggaggtccgggagagggaagcactcggccgaggctatggcggtgcacggggtcgggtaccacaagtatgcgatgctgcgccggcggcagatccagattgagacggaggcgtgggagcaggccgccgaggagtaccgcgagctgcttgctgacatgtgccagcagaagctggcgcccaacctgccctatgtcaagtcgctctttcttggctggttcgagccactgcgagaccagatcattgccgagcaggagctcgtgggtgagcgcggcgcgcgggcctcccatgcccgctatttcaacatgctcccggctgatatgatggccgtcatcaccatgcacaagctcatgggtctactcatgaccggtagcggcgatggaagtgtccgagtcatccaggctgcgtgccagatcggcgaggcaatagaacatgaggttcgaatccacaaatttctagagaagacaaagaaaaaaagcaataaagaaatggataatgaagaagaaggaggtgattcagacattgccaaagaacaagagcgtctaagaaagaaagtcactgatctgatgaaaaagcaaaaaatacggcaagtaagaaatatagtaaagaagcaagataactccaagccatggggtcaagatgctcatgcaaaagttggtagtcgtttaattgagcttatgattgagacagcctacatacaaccacctgctagccaatcagcagatggtccacctgatatccgtcctgctttcacacatgaaatgagaactgtggcaagagagcaacagaagagtagtcggcgatatggtgtgatcaagtgtgatccgctggtccggcaagggcttgatagaacagcaaagcatatggtcataccttatatgcctatgttaattccgcctatcagttggactgggtatgacaagggtgcacatttatttttaccatcctatgtgatgcgcacccatggagctagacaacagagagatgctgtcagaagagctccaagggaacaaatgcaatctgtgtttgaggccttaaatactcttgggagcaccaagtggagggttaacaaaagagttcttagtattgtcgacagaatatggtcaagtggtggccggcttgctgacttggtcgatcgcactgatgttgctttaccagagaagcctgacacagaagatgaagacaagttgaagaaatggagatggaccttgagagcagccaagaaggaaaatagtgaaaggcactcccagagatgtgatgtagaactaaaacttgccgtagctcgcaaaatgaaggatgaagatggtttctactatccacacaaccttgattttagaggccgtgcttatccaatgcatccttacctgaaccacttgggttcagatctttgccgtggagttttggagtttgcagaaggtcgtccgcttggtaaatcaggcttgcgctggctaaagatacatctagcaaatttatatgctggtggtgttgacaagttatcgtatgatggccgaattgcattcacggagaatcacttggaggacatatttgactcagctgatagacctcttgaaggcaaacgatggtggcttggagctgaggatccattccaatgccttgcagtgtgcataaatctcactgaagctttaagaagcccctcaccagaaacgatgatctcacatattcctgtgcatcaggatggttcttgtaatggcctgcagcactatgctgctcttggaagggataagttgggagccattgctgtgaacttagttgccggggagaagcctgcagatgtttatactggaatagctaccagggtggtggaaattatgaagaacgatgcgctaaaagatcctgctacagatcctgatgcagcacgcgcacgtctgctacttgatcaggttgacaggaaattggtaaagcaaactgtgatgacatctgtgtatggtgtcacttatgttggagcacgtgagcaaataaaaagaagattaaaggagagagacatgatttgtgatgattcagaactttttagtgcatcatgctatgctgctaaggttactctgacagcacttggtgagatgttccaagctgcccgcagcattatgaactggcttggtgactgtgccaaggtaattgcttgtgaaaatgaacctgtgagatggacaacccctcttggactcccagttgttcaaccatatcgcaagcttgggaggcatcttattaaaacatcattacaagtcctgactcttcaacgtgaaacagataaggttatggtgaagcggcagaggactgcttttcctccaaatttcgtgcactcccttgacggttctcatatgatgatgaccgctgttgcttgcaaaaggcaaggactaaattttgcaggagtgcatgattcgtattggacacatgcttgtgatgttgatacaatgaacaaaatactacgagagaagtttgtggaactctatgatacgcctatcctcgaaaatttgttggagagctttgagaaatctttccctgaattaaaatttcctccattgccagagaggggagattttgatctcacggatgtcctgggatccccatatttcttcaactaa</cdnaseq> |
| Protein Sequence |
<aaseq>MPSSPTPATAPISCSPSPPLHLHLTARRQTLAPPMWRRLPARRL ASALLSSSAPLPHPLHRSLLLLLPAASQRLAPSQTLPRFASSSAAVAAESVSSEEVDE LHHAIGEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRG KHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYV KSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTG SGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERL RKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQS ADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLI PPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRV NKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSER HSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAE GRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWL GAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAV NLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMT SVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNW LGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ RTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVE LYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN</aaseq> |
| Gene Sequence |
<dnaseqindica>11077..11187#10266..10369#10049..10163#9220..9267#9003..9092#8718..8792#8458..8610#7832..7916#5490..5560#5318..5368#4158..4574#3951..4082#3719..3832#2902..3019#2597..2655#2432..2498#2214..2347#1910..2125#91..984#accggctcccccaaccgcacccccctccttccgttggcggcggcggcggcggcgcggcgccattccccttcctccgccaccctcctgttgatgccctcctccccaactccggccaccgcaccaatctcgtgttcgccatctcctcctctccacctccacctcaccgcccgccgccaaaccctagcgccccccatgtggcgccgcctccccgcccgccgcctcgcctccgccctcctctcctcctccgccccgctgccccaccctctccaccgcagcctcctcctcctcctccctgccgcctcacagcgtctcgcgccgtcgcagacgctgccgcggttcgcgtcctcctccgccgccgtcgccgccgagtccgtctcctccgaggaggtcgacgagttgcaccacgcgatcggggagatcgcccgcggggacccgagcgtctccgccccggctccggcggcggggcaggaggggcataggaggaggtccgggagagggaagcactcggccgaggctatggcggttccggcggcggggcaggaggggcataggaggaggtccgggagagggaagcactcggccgaggctatggcggtgcacggggtcgggtaccacaagtatgcgatgctgcgccggcggcagatccagattgagacggaggcgtgggagcaggccgccgaggagtaccgcgagctgcttgctgacatgtgccagcagaagctggcgcccaacctgccctatgtcaagtcgctctttcttggctggttcgagccactgcgagaccagatcattgccgagcaggagctcgtgggtgagcgcggcgcgcgggcctcccatgcccgctatttcaacatgctcccggctgatatgatggccgtcatcaccatgcacaagctcatgggtctactcatgaccggtagcggcgatggaagtgtccgagtcatccaggctgcgtgccagatcggcgaggcaatagaacatgaggtttgtcggctgtggctgagttctgtatcttcttgtttgttttacttttcaactctgcgctccattcaagaatagttattggttaatgatagcttttaggaatgagaacaaaacataattcaggggtatcagtccttgggtcacaaaatattttacacgcatcacgacatgccacggtaggtgcggagatatgatatgaccataggccattggacctttaggatgaacgctggcagaattcaaaatgttctatatttcaatactattaagttaaatatatttcttcctgcagttttcagcgcttaacatcattagagcttatcatgattgcattaccaatttatttttcttttggagacgtatggttgtatgaaattattggagaagtatgtgtgtatgagttcaactattattgaaccatggttgaaataaagatcaagagcctcctaatataggcctcatcagaagcctatatgatttggttagttccttagaattgtgctttgctagcagtggggctccttcaaataacctcaggtaaaaatatttgtcaaatatgcagaattttttctaccataactgagaatagtgttcgtgtttttcagatataatttggtagtattcttgcagagctttgattatctagctagttcatgtttccctctgaacccaccaatttagttaaaaaaattccaactattgtccaaacaaagttatgccatgaaattatacctttattggctctcattcgtctattattttcttaaatattttgagaatatgttaattttcaattttcaatattttgtttcgactaaactattattgttgccagtgcaccaattatggcgacagtaatttatgcaataacattgctgctgctaatgaataaatgtatatgtctttgccctttgttcctgtataggttcgaatccacaaatttctagagaagacaaagaaaaaaagcaataaagaaatggataatgaagaagaaggaggtgattcagacattgccaaagaacaagagcgtctaagaaagaaagtcactgatctgatgaaaaagcaaaaaatacggcaagtaagaaatatagtaaagaagcaagataactccaagccatggggtcaagatgctcatgcaaaagtacgtgtctcttgctgaatctggttaatataatgtttcattacaacactattttgactgatgatagtttctatgtcttgctgcttaggttggtagtcgtttaattgagcttatgattgagacagcctacatacaaccacctgctagccaatcagcagatggtccacctgatatccgtcctgctttcacacatgaaatgagaactgtggcaagagagcaacagtaataatggcaactctaattttatatcttcttttacaaaagcagtttggtgtttcgtcctaactcatcattgtaatcaaacaggaagagtagtcggcgatatggtgtgatcaagtgtgatccgctggtccggcaagggcttgatagaacagtgagtggatccttctgctatcgtcttgattctgtcaaaagactcttctgatcttgcattccttgatttcctcatgaataatgtttttcctttgacaggcaaagcatatggtcataccttatatgcctatgttaattccgcctatcagttggactgggttggtaccttttgcttatctatgtttcttggagttctttggctgctatactatccattttaacaaattagatatgtggtatattttaaataatatgttattgcacctaatagtcgagatatttttttctagtcctatctgattagttcagtgcaagttggtgctgtttggtgaggccattgttgcattgacactctgaatatgaagcagactgctctctattgacatcatgcaaatattctataggtatgacaagggtgcacatttatttttaccatcctatgtgatgcgcacccatggagctagacaacagagagatgctgtcagaagagctccaagggaacaaatgcaatctgtgtttgaggtattcatttaacttgctcataatttttatgcaaattatattaataatttttaagatacaatcataagatatttgagcacacctgttgttatgttacagttgcttctattgttcatatgctcttggacattgacatgttgatgcctttttatgaagagaaaattctctatactctacatatccactctgttaacatgaattgccataagtgtactgggtgtctgggtcataaccctaaatacaaccccccctcccccccacccaaatccccatccccacgatacattccacatgctgctcgcttctgcttgcctctgcatctcatgactatgattggctgttcgcctctgtttgcaactgccattgacaccacccaccttctcaccctggcaatgctcgcctccacccactgttccacccctgaccgcacccaatgccagcctcctccccagctcggcctctgcaccctgtcggcaacgttctccacccccagggacgcacctccagctcctcccaggaaccctagttctgtttttcggaacacaataatattatcatttgcagctttgattaaaagaaaagcaatttttaaacaccaaaacctctaaaacagctgcaccaaatgagatctatcataatccacctaaatgccaagaggagcttttgtggttcaaccatttaatgcattattggtcacaggccttaaatactcttgggagcaccaagtggagggttaacaaaagagttcttagtattgtcgacagaatatggtcaagtggtggccggcttgctgacttggtcgatcgcactgatgtgagttgtcatttattctcataataatgctgtgagcatgtgactcagattcaatggtggtggttttatcaagatactttagttttagatatcaactaaaaagtttcatgtactctaggttgctttaccagagaagcctgacacagaagatgaagacaagttgaagaaatggagatggaccttgagagcagccaagaaggaaaatagtgaaaggcactcccagagatgtgatgtagaactaaaacttgccgtaagagactataacgggtaaccatcatttactcacttcattgcttcatctaatgaatactcatgttggtaacaggtagctcgcaaaatgaaggatgaagatggtttctactatccacacaaccttgattttagaggccgtgcttatccaatgcatccttacctgaaccacttgggttcagatctttgccgtggagttttggagtttgcagaaggtcgtccgcttggtaaatcaggcttgcgctggctaaagatacatctagcaaatttatatgctggtggtgttgacaagttatcgtatgatggccgaattgcattcacggagaatcacttggaggacatatttgactcagctgatagacctcttgaaggcaaacgatggtggcttggagctgaggatccattccaatgccttgcagtgtgcataaatctcactgaagctttaagaagcccctcaccagaaacgatgatctcacatattcctgtgcatcaggtaccttaactttctctcatttgctttagagagcaatgatcaattggtaaattccttatttatgcaatatagctatgtagtgatcatttgatggggctcttgttctcataaatatggtttttttgctactgatacatttttcatatggcactgcacgcccatttcctatggttcatctcagttgttatcatctatttgta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