Difference between revisions of "Os05g0485300"

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(Created page with "{{JaponicaGene| GeneName = Os05g0485300| Description = Protein of unknown function DUF887, TLC-like family protein| Version = NM_001062408.1 GI:115464546 GeneID:4339138| L...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0485300|
 
GeneName = Os05g0485300|

Revision as of 20:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0485300

Description

Protein of unknown function DUF887, TLC-like family protein

Version

NM_001062408.1 GI:115464546 GeneID:4339138

Length

3637 bp

Definition

Oryza sativa Japonica Group Os05g0485300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23912964..23916600

Sequence Coding Region

23913239..23913316,23914800..23914888,23915071..23915209,23915301..23915375,23915471..23915592
,23915689..23915764,23916188..23916247,23916341..23916493

Expression

GEO Profiles:Os05g0485300

Genome Context

<gbrowseImage1> name=NC_008398:23912964..23916600 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23912964..23916600 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtgaggtttgggcccgaggagcagatcgtgtggccggcttctgttcttgctgggatcctcatgtgcgcagcggtatatgatataactcgtgaagttagctcccggtgctacaagggttataatggactgaatgaattgcacaaacttgagtggaacaacaggggattctctaccttccacgcattagttgctgctgtagtctctttttatctgctggtgatatctgacctcttcagtaaggacgtccatggtgccatcataattgatcgaaaatcatggatgtctgatgccatgtttggtgtatccctgggctacttcttgacagatttgttgatgatcctctggcatttcccttctctaggaggaaaggaatatctcttgcatcatggattgtccatgtatgcaatctctcttgctctgttgagtggcaaaggacacgtgtacatcctcatggtcctcatcactgaagcaaccacacccttcgtgaacctcagatggtaccttgatcttgcaggccggaaggactccaagctttacctgtacaacggggtggcactgtttgctggatggctggttgctcgcgtcatactgttcgtatacttcttcgctcatgtgtaccttcacttcgaccaggtgaggacggtgttcccgctagggttctacagtatgatggcggtgccgccggcgatgtcggcgatgaacctcctctggttccggaagatctgcaaggggatggtcaaggccatgtccagcgccaaccgaagtcaatgcgtcaagacagattag</cdnaseq>

Protein Sequence

<aaseq>MDVRFGPEEQIVWPASVLAGILMCAAVYDITREVSSRCYKGYNG LNELHKLEWNNRGFSTFHALVAAVVSFYLLVISDLFSKDVHGAIIIDRKSWMSDAMFG VSLGYFLTDLLMILWHFPSLGGKEYLLHHGLSMYAISLALLSGKGHVYILMVLITEAT TPFVNLRWYLDLAGRKDSKLYLYNGVALFAGWLVARVILFVYFFAHVYLHFDQVRTVF PLGFYSMMAVPPAMSAMNLLWFRKICKGMVKAMSSANRSQCVKTD</aaseq>

Gene Sequence

<dnaseqindica>276..353#1837..1925#2108..2246#2338..2412#2508..2629#2726..2801#3225..3284#3378..3530#gttgtacgcggacgactcaatcggttagctcgcttcgtcgtccaccgtctccctcggtcaccgtcgccgcgcacgactcccatccatggcgatcgagctctgcccatttaagcccggggcgcctctcttcgaggacttgcaaacgcttgctgcaaggattggatcctctggcttctgttgatttggggagcttttcatcgtctcgaccgaacggccagccgccgagatcgaggaaggaggagatcgaagggcagagtgatttggcagcggtggacatggatgtgaggtttgggcccgaggagcagatcgtgtggccggcttctgttcttgctgggatcctcatgtgcgcagcggtaagttgttccatcgatctcttccattgcttagctagatacgagagtgcattcccagtaagtcctactttgatttgtagaggaaacataagatacttagaggatttcaatattgtacaaaagaaattgaagaaattcctatgaaggcctttgaaatcaatcttttttaaaaaaaaaaatcctacgaaatggacaatattatagagatttagaaaaattaaaaagagctccaacttttttgaaaatttcctttgactatatttcttttatctcctactgcctaatcaaacaacctgttttgcaatcatgtgtgttttttctatttctccttttttttaatcgtgcgttacaaaatagccctaaaattttgctacaaatttgcatcttcacggtaaagctaaactgcctaaagtgtattttctctagtgagatgagcaatcccatcttgtatttacctttttagaggtcgaactactaaatcaggtttcggtttttcgttataaaaagaaaatttgtgaaatgttcctcagtactgatattaatttatgcatttctatcatccaacttttgagatccaaaaagggcaaagtatcaccatcaatctgcacttgacttccatagctcagtctttctgcttggaacgtcccaccttttcttcttcttctttttttaatgtaggaagaatagtattattcgactgtaaaaactcttgcaatgtatgcagaccagccattacaagtactgaacctaacttctgcagagagcaaagcaactaatagtgacagcttagttggactcgtagacgtttgttgaatgcaatctagccttgatactccctccgttcccaaaaacttgtcaccaaacactattcacaatcaaactttgactaatctttttccgttaattaatttataaaacaattcaaaatatattatattatcaaattaccttatgtgaaaaatataatcacacaattttccatcataagagaatctaacattttttaaaatattcgggaatggaaggagttgctacttgggtgatacatggtgttaaaaatatgaatgaattattacttttttttactgaatatgagtgaattatgaatcactactccttttcaattttgaagactacttatgtcagcatttagtaccacacagtcgaggaggtagccaacggaatcgtgccgtcaataatgcttaaggaccagattacctttataatttgtgaattcctccatcaccaatacggattagtatgtgaagagatataccagattacctttttcattttttttttacttgtcaaaaggctaggtaggtagcttgagaagtacatgcatggtaaatggtaacaagaaaacatagggaaaaaaagaggagggatcaattgttcctgagcctacatgatgaattcattctgcattatattttgtattatgccactgaggcactgactagcttctactccattcttataggtatatgatataactcgtgaagttagctcccggtgctacaagggttataatggactgaatgaattgcacaaacttgagtggaacaacaggtgattaattggagcttgcttgtttttctctttctttttctttgacaggtctttttcaataaatctttgacaggttcttattatcgactaattgcagtattatctaaaaatcaactaacagtagcgatgcatattcacttctcttcatgctagtaattacaactcgtttatccatgttttaggggattctctaccttccacgcattagttgctgctgtagtctctttttatctgctggtgatatctgacctcttcagtaaggacgtccatggtgccatcataattgatcgaaaatcatggatgtctgatgccatgtttggtgtaagtttgcagccctacgcatccaggaaaccatggagaaaagagagaaagatatctgtcccaaaatgtctgaaattttaattattggcaggtatccctgggctacttcttgacagatttgttgatgatcctctggcatttcccttctctaggaggaaaggaatatgtaagtgttaatgttctgagttgtccctttttcttttactacaatttgaggtgacacaagttaacaatctattctgattgtattgatatgttcagctcttgcatcatggattgtccatgtatgcaatctctcttgctctgttgagtggcaaaggacacgtgtacatcctcatggtcctcatcactgaagcaaccacacccttcgtgaacctcagatggtaatactcattcagttttcccaaattgctcattaatcatcttgcttgttcatgtctgagatcacaattattcatgcattctttctgaaaatgcaggtaccttgatcttgcaggccggaaggactccaagctttacctgtacaacggggtggcactgtttgctggatggctggtataatttctctttgtaaatgtttccatgcaccaaccaattcatcttttgttcatcaaaaaacacgcctgaattttcatctaaaggactgccaataagtaaacaacaaaaaaaacagaattgaattttcatataaaagactaagccgatagtaaataacaacaaaaacaaaacatgcctgaatttttttgagtgctcagacatggaatggaagctgcaattatttatttaagtgtgcgtccgacaagatttgaacttgagacttgtagctccgataccttattgagtttttttttttaaactaacgataccttattgagttgcatataactaccaattcaacccaaatattaaaatgatgaaaaaaaactaacaattcacttatactccaagtgatactgatcttcttgttcttgtatgcaggttgctcgcgtcatactgttcgtatacttcttcgctcatgtgtaccttcacttcgaccaggtaatcataatcaaccaatcgtcttctcttcagggttcagctttgtgacagtctgttgttaaattagttcctggctgttcgattaatttgcaggtgaggacggtgttcccgctagggttctacagtatgatggcggtgccgccggcgatgtcggcgatgaacctcctctggttccggaagatctgcaaggggatggtcaaggccatgtccagcgccaaccgaagtcaatgcgtcaagacagattaggacttgggtaaaaggagatgcaacgctgtctggaagccaaatgcttactagcttgcttgtttgatgattaactaaactgtaatcaatcaattgattatttgaaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0485300, RefSeq:Os05g0485300