Difference between revisions of "Os05g0491200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0491200| Description = Similar to SNF1 kinase complex anchoring protein (Fragment)| Version = NM_001062443.1 GI:115464616 GeneID:4339173| L...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0491200|
 
GeneName = Os05g0491200|

Revision as of 20:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0491200

Description

Similar to SNF1 kinase complex anchoring protein (Fragment)

Version

NM_001062443.1 GI:115464616 GeneID:4339173

Length

3276 bp

Definition

Oryza sativa Japonica Group Os05g0491200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24184885..24188160

Sequence Coding Region

24185094..24185444,24185570..24185732,24185827..24186011,24187594..24187767

Expression

GEO Profiles:Os05g0491200

Genome Context

<gbrowseImage1> name=NC_008398:24184885..24188160 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24184885..24188160 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaacgcgagcggcaaggaaggggaggagaacggccacgtggcggcgggggccgccgccggagtggctggctcggcgggggcagcggcccgggctccgccgccgcttatgccgccggacgccgtgatgcgggagctgcctcccccggtgccctacgtcttcacgccgcaggttccagtagccccactgcatatacctactgaattttctcctgttttcaacaattcatggataaatgaatcggatgaatccaccaataaccatccccaggagaagggaattccaactttgatctcatggagtcaaggaggaaatgaggtgtttgtggaaggatcatgggataactggacatcaaggagggtgttagagaagtctgggaaagaccataccatattgctagttctgccatcaggggtataccattacaggatcatcgtcgatggggaaccgaaatatgtccctgaactacctcatgtggctgatgagggagggcaggttgccaacctcctcgatgtccatgattatatcccagaaagcctgggcagcgtggcaggattcgactctcctccgtcgcctgaacacagctatgatctccagctcccaggtgatgaggagtttgccaaggagccacctatactgccacctcagcttgtaatgtctgttcttggtgatactgataactctgaagaacaaactctgaagccaaagcatgttgtcctcaaccacctgtatatcgagaaaggatggggatcgcagtcgctgcttgctcttggagtcactcaccggtttcaatccaagtatgtaagcttcgtgctgtacaagccgctgcgaaggtcatccacggcgaagcgaacaaagaatggtggttaa</cdnaseq>

Protein Sequence

<aaseq>MGNASGKEGEENGHVAAGAAAGVAGSAGAAARAPPPLMPPDAVM RELPPPVPYVFTPQVPVAPLHIPTEFSPVFNNSWINESDESTNNHPQEKGIPTLISWS QGGNEVFVEGSWDNWTSRRVLEKSGKDHTILLVLPSGVYHYRIIVDGEPKYVPELPHV ADEGGQVANLLDVHDYIPESLGSVAGFDSPPSPEHSYDLQLPGDEEFAKEPPILPPQL VMSVLGDTDNSEEQTLKPKHVVLNHLYIEKGWGSQSLLALGVTHRFQSKYVSFVLYKP LRRSSTAKRTKNGG</aaseq>

Gene Sequence

<dnaseqindica>2717..3067#2429..2591#2150..2334#394..567#taaacttggccgatccaacggcgggggaaatccgccggaaattaaagccggcgccgcgagcgtgcgggcgtggcgcggcgtgcgagtcacgtgacccacgtgccaaactgcctcttatatcgcctcctcctcctcctcccctgcctccggcgaagcggccggcggctgaggcgagattcgcggcgaccacgtcggcgaggagcgcgagagtgggggccctcctcctgtccgccgtccgcattctcgtcgtgtctggtttgagctgctgctgctgctgctgccggtgggagttgggctgcttgcttgcttggtttgattggtggaggtgggaggagtactggagtaggcgagtagctgtgggttggggtcggcgagggatccgggcggcggggtatggggaacgcgagcggcaaggaaggggaggagaacggccacgtggcggcgggggccgccgccggagtggctggctcggcgggggcagcggcccgggctccgccgccgcttatgccgccggacgccgtgatgcgggagctgcctcccccggtgccctacgtcttcacgccgcaggtgagatgtggtgattaatttttattaatttttacttccttttgatttgatgttcttggtggcttttgcgtggtaaaaccgtaaaagagtgtttcctcctcgattgtgccttgctaaattagtctcgctcgatgatgtcgagttcttgttttttgtcgagattgtttgattagcttggcaatttagcattagcactggttgcgatttgcgagcttggttgtgacgcacacacacaaaagggggtgaattttctatgaatcctcttcacttctttcactcatcagaattcagcaagatccatccagtgttgataaacttgaaatggcagctcactttgcttcaagccttcaactgtagggttagtgggtagcagaagctgaagctgagggctaaagcttacagatctataactaatccgcaacttgtatctctttccgatattctcaaagagtgtgttcttgactccttgttgctatataaaaaaacttcaccgcaataaaaggctctgtcaagaactgttgatagatttggtggcacctggattctctgcaaacggattgggtggctctgaatcttggattagttccacacactgtagtgggcaagttggccctcttacccctagagggcacatataccttttttttaatcattatatgatagaaattgagctgtggcggctgtatgtggagtactactattctagataatcttggtgctgttgattctttcatttccctcgttaattacaaaagcatggagaccatgatctagttttgaggggttttggtactgataagatatggtggtactgtgtgctaaggctacaagtttttaatgtgtccatgtagagcgcattgtttactcctgattccgagacagcccatgaatttagaagacgtgtcattgtaatcacttggttcttggttggccttgcctacaattcacaaaggtcaaatggctggttcttggagtaatactagttcataatcctgaaaactgtgttgttctgcatttgggcaatttctttatttttagcgttgaaagtttgaaagactccatgttcccttatttgccactgatatctcacgtgagccctggaccaacatgttagtgagatgatgagttgcaagtaatttaacagggaatacttcagttacatatgaggaatatattctagtattttgatctgtctaattacaaatgtttgtacaacttcagttattatatattactcttagagtctttagtcccagttaaaactgctctcccttttccctgtagaatgaagtcagcgtccagtcttcacacactttctcatcaatttcattttgacctatggaatgttacacatcaatacatcattaactgtttcagttcctgtaatattggaagagatatgtcatgagctcatgcttcagtttgctataactgtgccataacaagttggcaactattaccttttgccatctttcatattaagaatgttgctaatctgtatttatttgggagtgagaataactcacatgtttgagtattattgctagtcctgcttgaactgacaggcaagtgcacattgcaggttccagtagccccactgcatatacctactgaattttctcctgttttcaacaattcatggataaatgaatcggatgaatccaccaataaccatccccaggagaagggaattccaactttgatctcatggagtcaaggaggaaatgaggtgtttgtggaaggatcatgggataactggacatcaaggtacatgctatttaacaatgaaatttcatgttcagattgtttccacatttcagaaataagatgctaaaatacaaatccggcattttattgtcaggagggtgttagagaagtctgggaaagaccataccatattgctagttctgccatcaggggtataccattacaggatcatcgtcgatggggaaccgaaatatgtccctgaactacctcatgtggctgatgagggagggcaggttgccaacctcctcgatgtccatgtcagtaagaatatgctaattattgattttagcaatcaaaattgagagaacctaaaaccgcaaaggcaaaaaaaaatgtgcatttccctcttggttttatctgaagacatctttgttttgaataggattatatcccagaaagcctgggcagcgtggcaggattcgactctcctccgtcgcctgaacacagctatgatctccagctcccaggtgatgaggagtttgccaaggagccacctatactgccacctcagcttgtaatgtctgttcttggtgatactgataactctgaagaacaaactctgaagccaaagcatgttgtcctcaaccacctgtatatcgagaaaggatggggatcgcagtcgctgcttgctcttggagtcactcaccggtttcaatccaagtatgtaagcttcgtgctgtacaagccgctgcgaaggtcatccacggcgaagcgaacaaagaatggtggttaaactcatggtaactgacaatgtacataagtgaaatgcaggaggtcttgttgtttgatgctgatcaaagcaatcaactttttttttaatttctctctttgtttctttaataagctgttgttgtagcatgatgttttagaagcctgaactctatgagaaaatgagtcaagagagggatgaaaaaaaaagagaatatccctctatgcttacct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0491200, RefSeq:Os05g0491200