Difference between revisions of "Os05g0494900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0494900| Description = Eggshell protein family protein| Version = NM_001062462.1 GI:115464654 GeneID:4339194| Length = 2005 bp| Definition...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0494900|
 
GeneName = Os05g0494900|

Revision as of 20:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0494900

Description

Eggshell protein family protein

Version

NM_001062462.1 GI:115464654 GeneID:4339194

Length

2005 bp

Definition

Oryza sativa Japonica Group Os05g0494900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24354990..24356994

Sequence Coding Region

24354991..24355167,24355359..24355827,24356386..24356611,24356657..24356813

Expression

GEO Profiles:Os05g0494900

Genome Context

<gbrowseImage1> name=NC_008398:24354990..24356994 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24354990..24356994 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attcggcctagttctaggggaccatcatttctgacacttactctgaaaatttttgatggtgtccttgcacacaaggagataactgaaggtggaaaggatcataaagatattacaagcttgcttcgccttggaaaaacattgacaattgataatgaaacttttgaagatcttgatgaggttatagacaggtacgtggatccattggtaggccacctgaagagcatgcttttgtaccgcaaattcaagaaaggatcaaaaagtgaggttgatgagatgttaagggctgagaaatcagagaatcctatgagaatagtgtattgtttcggcatatctcatgagcatccaggcacatttattttatcttacattaggagtacaaatccacatcacgagtatattgggttatacccaaagggctttagatttcgtaagagggactttgacaatattgatcgcctagtgtcctatttccagaagcatattgacaaaccaccacctgatgctggtccatcaatgcgaaatgttgctgcaatggtgcctatgaaaagttcaggttggggtaatggtggtggcactggtggtggaaatgatggatggagaggagatggtaacaacgacagggatagacctttctctggaagatcaggaggcaggtttgattcaaggaacagctctggtggtcgtggacgtgggcgcgggcgtggtagaggtaactttggcagtgatgatggtggcggcggaggttggagtggtggcggtggcggtggcggcaacagtgggggatggactgacaatattggaagtggcggaggtggatggggcacaggtggtggttcctcgtgggctggtggtggcgacggaggttctggaggtggtggttctgatggcggcggcggtggctggggagcagcacccggtggatccaacgatgccccaggatggggcagcggcaaaaaggcggtcccagcacaggatggtggtagcgggtggggagcttccgccggcggcggcagcggtggctggaactag</cdnaseq>

Protein Sequence

<aaseq>IRPSSRGPSFLTLTLKIFDGVLAHKEITEGGKDHKDITSLLRLG KTLTIDNETFEDLDEVIDRYVDPLVGHLKSMLLYRKFKKGSKSEVDEMLRAEKSENPM RIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFRFRKRDFDNIDRLVSYFQKH IDKPPPDAGPSMRNVAAMVPMKSSGWGNGGGTGGGNDGWRGDGNNDRDRPFSGRSGGR FDSRNSSGGRGRGRGRGRGNFGSDDGGGGGWSGGGGGGGNSGGWTDNIGSGGGGWGTG GGSSWAGGGDGGSGGGGSDGGGGGWGAAPGGSNDAPGWGSGKKAVPAQDGGSGWGASA GGGSGGWN</aaseq>

Gene Sequence

<dnaseqindica>2..178#370..838#1397..1622#1668..1824#cattcggcctagttctaggggaccatcatttctgacacttactctgaaaatttttgatggtgtccttgcacacaaggagataactgaaggtggaaaggatcataaagatattacaagcttgcttcgccttggaaaaacattgacaattgataatgaaacttttgaagatcttgatgaggttggtacacatgatctctttttgttaccattgttactctagttcagtatcagtaagtggtgactcttttctgtgtttgttttgcacgccagcatggttctgtgtttctttttgcttgctgttatcacttagcagtagattgtcattctgttatttttggctaactactggtgctttattttggcaaataggttatagacaggtacgtggatccattggtaggccacctgaagagcatgcttttgtaccgcaaattcaagaaaggatcaaaaagtgaggttgatgagatgttaagggctgagaaatcagagaatcctatgagaatagtgtattgtttcggcatatctcatgagcatccaggcacatttattttatcttacattaggagtacaaatccacatcacgagtatattgggttatacccaaagggctttagatttcgtaagagggactttgacaatattgatcgcctagtgtcctatttccagaagcatattgacaaaccaccacctgatgctggtccatcaatgcgaaatgttgctgcaatggtgcctatgaaaagttcaggttggggtaatggtggtggcactggtggtggaaatgatggatggagaggagatggtaacaacgacagggatagacctttctctggaagatcaggttagtttttaacgcacttgcacaatgttatcatccagtttatttgcatggtattggcaggccagctttattatgactcaaagatgtttgcatacttaatatttgcatggaggactttaaattctatgggcctttagttcttcagttagcagaactatagatatgcttgtgtcagtttcagttggctgtagcattctttagggtgattcacgctctgtttgcaggcgccagtatcatgagaaccatttacttcaaaaaaaaattaaaaaatattgccctctgtatttgggattcctgattgtttatgtggttcaggtcaatttatttcatatttcaattttctacttcccattgcactttctttatcttgtgcttctccaatcattgatatcaccgatgaggttcccactaaacatgtgaaaagctaatcttgaggcaactataaaaccggccaagctactatttttggatagtaatatgatttgttacatttattgaattgttgatggatccttaagtagtcacgaactcccttttggtatcttttgtctaaagcaggaggcaggtttgattcaaggaacagctctggtggtcgtggacgtgggcgcgggcgtggtagaggtaactttggcagtgatgatggtggcggcggaggttggagtggtggcggtggcggtggcggcaacagtgggggatggactgacaatattggaagtggcggaggtggatggggcacaggtggtggttcctcgtgggctggtggtggcgacggaggttctggaggtggtgatagtaaccgtggtggtggtggaggctggggaacacccgctggtggttctgatggcggcggcggtggctggggagcagcacccggtggatccaacgatgccccaggatggggcagcggcaaaaaggcggtcccagcacaggatggtggtagcgggtggggagcttccgccggcggcggcagcggtggctggaactagtcaaagaactgctagatgaaatatttttttttttgttttctggaccctcttctatatctggtaattgcgctccacgggagaaaaattgtcactgttcggggaccctagtaatctgctactgaatgccgctggttttatacattttggacggccttattttgaatgcatgtacagcttaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0494900, RefSeq:Os05g0494900