Difference between revisions of "Os05g0511300"

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(Created page with "{{JaponicaGene| GeneName = Os05g0511300| Description = N2227-like domain containing protein| Version = NM_001062549.1 GI:115464828 GeneID:4339287| Length = 9500 bp| Defin...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0511300|
 
GeneName = Os05g0511300|

Revision as of 20:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0511300

Description

N2227-like domain containing protein

Version

NM_001062549.1 GI:115464828 GeneID:4339287

Length

9500 bp

Definition

Oryza sativa Japonica Group Os05g0511300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25382598..25392097

Sequence Coding Region

25382972..25383043,25383714..25383767,25384020..25384088,25384202..25384261,25384423..25384520
,25385394..25385467,25386019..25386132,25386235..25386301,25386387..25386451
,25387051..25387130,25387236..25387280,25387782..25387847,25388293..25388448
,25388839..25389063,25389177..25389219,25389544..25389587,25389738..25389810
,25391882..25391961

Expression

GEO Profiles:Os05g0511300

Genome Context

<gbrowseImage1> name=NC_008398:25382598..25392097 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25382598..25392097 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaacggcggtacaccgagcaggaggaggcgctcgagatcagctcactccgccgcatcatcgccgcctacgccaactaccacgatgctgcagaaagggatgtcaagagatatgagcgatcattcaaaaggcttcctcctgcccacaaggaacttctttttaaccttggtctgaagtaccaaaggctgagatggtgtatatccatgaatgcatcattcatcatggacatgcttgaggcatttgagcctcctttcgacatgagtcagcatgtagatatggatggtcatgattgcgcagagaacatgcatggacattgtcatgcagattgtgctcattctgtcgataggggtgattgctttagaagttctatctctgtaagcaattccgagttgcatgaaccagacggttgccccaggaaagacgacaagactcatgaactctcaagagaaactgacaacaaggacgaggtagttgacatggaaagttgctcccggccggttggtgacaaattgggggcatctcaggttgaagataaatcatgtaatggtgataaagccatggatgcagcagctaactgtcaagatacagattgtgttgcatgttctgctgatgagaatgtgataccgcagcaattcatggctccatccttgcagttgaatgttcctccaattgatgttgacaaggttagatgcatcataagaaatattgtcagggattgggctcaggagggtcaaaaggaacgtgatgagtgctataagcccatcctggaggagcttaatcgtctatttcctaaccgaagcaaggagaggcctccttcatgcttagttcctggtgctgggcttgggagattggctctggagatatccactctgggttttgtgagccagggaaacgagttctcgtattacatgatgatttgttcaagtttcattctaaaccacacgcaagaaaccaatgagtggactatatatccttggatacacagcaactgcaattctctttcagacaatgatcaacttcgccctgtttcatttcctgatattcacccctcaagctcagggatcacagaaggattttctatgtgtgctggtgattttgtagaggtctacaatgaagaaagccaagaatcttcatgggatgctgttgtaacatgcttcttcttggatacggcacacaatatcgttgaatatatagagatcatatcaaaagttctcaaggatggtggggtctggataaatttgggtccgcttctgtatcacttcgctgactcctatggaccagatgatgatatgtctattgaactgagtttggaagatgtgaaaagagttgcttaccattatggatttgtgatggaggtggagaaaatgatagataccacatacactgcaaatatgaaatcaatgatgcagaatcggtaccgcgcagcattttggacgatgaggaagaatgcatctcgatcaaaagctcaaaaacaccagtga</cdnaseq>

Protein Sequence

<aaseq>MAERRYTEQEEALEISSLRRIIAAYANYHDAAERDVKRYERSFK RLPPAHKELLFNLGLKYQRLRWCISMNASFIMDMLEAFEPPFDMSQHVDMDGHDCAEN MHGHCHADCAHSVDRGDCFRSSISVSNSELHEPDGCPRKDDKTHELSRETDNKDEVVD MESCSRPVGDKLGASQVEDKSCNGDKAMDAAANCQDTDCVACSADENVIPQQFMAPSL QLNVPPIDVDKVRCIIRNIVRDWAQEGQKERDECYKPILEELNRLFPNRSKERPPSCL VPGAGLGRLALEISTLGFVSQGNEFSYYMMICSSFILNHTQETNEWTIYPWIHSNCNS LSDNDQLRPVSFPDIHPSSSGITEGFSMCAGDFVEVYNEESQESSWDAVVTCFFLDTA HNIVEYIEIISKVLKDGGVWINLGPLLYHFADSYGPDDDMSIELSLEDVKRVAYHYGF VMEVEKMIDTTYTANMKSMMQNRYRAAFWTMRKNASRSKAQKHQ</aaseq>

Gene Sequence

<dnaseqindica>9055..9126#8331..8384#8010..8078#7837..7896#7578..7675#6631..6704#5966..6079#5797..5863#5647..5711#4968..5047#4818..4862#4251..4316#3650..3805#3035..3259#2879..2921#2511..2554#2288..2360#137..216#gggctttgcccctgagcataactgaagcaaagacctcccccacgcgacgcgagacgcgacccatcattcggaggcccaccaattcatctggagaaagctgcgctcctccgcctcgccgccgccgccgccggggaggatggccgaacggcggtacaccgagcaggaggaggcgctcgagatcagctcactccgccgcatcatcgccgcctacgccaagtacgtcaacccccatcccgtccccctcccctcccctcccagctcgtctcgtctgccacgccactctccttgctcgccggggcggcggttggttggtcgcgtagaggcgcgtagctccgttctacaggctccccccgctttgttccgaggcttgtgggggtgtgtgtgggttacaacttagttcgagttggtgttgtttctcagttgtagggtttaggagtagtcgccgattcgagggtggtgtgaggttctggatagagttgatctgtggttacggggattacccatccgcgaagggcggtaggcttcgttgggacttggggagttctacactacaaccatgctatgaacgttgttgattggagtgagagaacatttcttttttccccgttgaagtctttacgaaaatcttgataaaccaactcataggcgtgacccttaaaagttactatatgtgatgtgagcaagtgatatctcctggaattgctattttttatttagaaattccataatcaaagtattattgcatcaacacttgtacttttgtcaaatcttgttttcttttcaagttttagcattgatattgcagaagtactccctatgttttacctatcttctttagaacgcttgcagttaacatttgaaaacatttaccactaaggccattcacagtgcacacacgtggcgtatggcaatgttggtccacgtaggcaaatcgcttgtgtggaggagagaggggagtggagactgttccctcaccagcttcgcgtgatcagagttggtcacaagaacctcgcagcaactttgtcagaaaaaatgctcctccacgcgtaacaagaaagtaagagcgagagtgagaaaggagaagaacggtggatgactgaagagtgaagagagaagttcgccggagtaggggcgctcagggagctcgctgccactgcgtgggctcggggatgccgccgccgctgcttgggcttggggtagccgagggaggaggccggagagggaggggagaggtgcccgatgctgtcgagctgcttccaccaccgccttctcccaagcggcgccggcggtgtttggggaatggggagggggagccagatctgtgccgccggtgggagaggagggggtgggggagtcgccgctgtgcgccgccgtgggagaggaggggggcggaggagtcgtcgccgtgcgccgccgtgggagaggacgaagaggagggtgggggtttggcgccatgggagccgattgagggagaggagagagagagagatggggaaggagcggcggaaaatgggaggtgcaagcgatttttctccgaaggaggaaatgacgattttttgtggtggggcctgcctgaaaaaaaattaatggtggaccccatctaaagctatgcgtactgggagagatggagcctcatttactttttccctatgtggatgcttgggctccttgatgagccgggacgcagtgctattgccctagtacactctaaaatagttaggacttggtacatggcaatggtatgggtagatttaccttcaaaacttctaacataaaattgtattttgaaattttcgtccaacatatgaacacaattggaaaaggtgggggccatggggacaaaacaagtgtagcgaagactgtgccagtgttgaaatgacttactccctccgtttcaaaatgtttggcactgttgacttattagtacgtgtttgaccgttcgtcttattaaaaaaatttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatacgaaaagaataaataattacttaaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagtataagaaaagaatgcaggcaatacaatggcttctgaatttgaacatttattggtatggaaaatctaaatgtgaaatggtgtatgtggaacatagctacatgggaaccatttaacttatattagtgtttttctaattaaataataatattttgtatggctattgtgatagctaccacgatgctgcagaaagggatgtcaagagatatgagcgatcattcaaaaggcttcctcctgcccacaaggtttgtatttgagtcaccatacccgttttacctttttatattcaaccaccacttcctcttggctaatcacttttggatttcattttgacttgtaataggttatcttactctgtatgttcattcacatatcttatgtcttttcttgtgtaggaacttctttttaaccttggtctgaagtaccaaaggctgagatggtaagtaatgttatgggcttaatgcttgtagtagtggccaatacttattagttccactgcttgtgcttaaatattgtgaaatacagttttgcagtagatctatttgtcatgtttgaaatcatctaaagcattttgtatatctgatgcactgtactttatttatttagtcaacattttttagttctaccaatgatgttctatcttaaattctccgccggatttttctgaaaaatcaatgcatgctgcttaaactagttatggccactccttttgcttactgtgatggactttattattgttttgtaattgtttattacttcacaggtgtatatccatgaatgcatcattcatcatggacatgcttgaggtatgtttgtgttattgtgtatatgtggtttgggttgtcggggtgggaagattgtacgttaggtgaaaactttaatgtacatgatgctatccttaaaaggtatattactgcaggcatttgagcctcctttcgacatgagtcagcatgtagatatggatggtcatgattgcgcagagaacatgcatggacattgtcatgcagattgtgctcattctgtcgataggggtgattgctttagaagttctatctctgtaagcaattccgagttgcatgaaccagacggttgccccaggaaagacgacaagactcatgaactctcaagagaaactgacaacaaggtaggccttatgtcttgtcttgatcctttttgttcaattttaaaaataatggctgcttccatgttgaagccatatacactactccctccgggttgataatacttgtcgttttggacaaggacacggtctccaaaaaacaactttgaccattattttctattataatatgtataaaagtgttaataaatatatgattttattaaagtacttttcaagactaatctatacatgtagtcaccatatttgaaagacaaatattttaaaaatgattcataatcaaagattctaaagtttgacctcacccttatctaaaacgacaagtattatcagcctggagggagtacaaaattggtgatatcacacgttttgactgatgtaagtatcaaacaggacgaggtagttgacatggaaagttgctcccggccggttggtgacaaattgggggcatctcaggttgaagataaatcatgtaatggtgataaagccatggatgcagcagctaactgtcaagatacagattgtgttgcatgttctgctgatgagaatgtaagctccacctgcaagatgtaagctgttgtgtattccttataatttataattgcatgatgcagaacatagtttagctttcatgcttgaattttatcactatgaatctaaaggagtaatacatggatgtggcattcttgttatcttctggttgcaataaatggcagaatgcatttgttcttcgctatctctagctgttcgttcggttatcttctggttgcaataaagggcagaatgcaataagtgttttcttccttcttaatgaaatgaaatgcaaccctcctgtgtttttgagaaaaaaagtacatcacacaatatttacacataattttcagtctaacaagcattgatttttctctgtttatctgttcttctcatacttttaaggagataacgatatgtataaataaatgtgaactatttaattcttgttatcttattttaggtgataccgcagcaattcatggctccatccttgcagttgaatgttcctccaattgatgttgacaaggtaagtgtttctatcaacttctcatttgacacatttcgaacagaaagcatactgcaatgcgtcaagaagatagccaaaggttcatgttggttgaccgccacagttgttaccaaagctgacatcttttctgatatggggatgttactgattttcattatatgctgatttttcttttttccctttaacttcttaatagcaagtgctcaatcatgccatattttgctgatgttgtatgcatgtgtgtagtttcttgcaccttggccttgttaccaaagctggcatctttcctgatatgtggtgttactgatttctatcatatgttaatttttcctgtcatttttttccccttggcctcataatgggaagtgctcaatcatgctatattttgctgatgtagtttcttgcacctttgcctacattttacatgtttttcagcttgcatgtttttggatgctgtctggtttatagcttctataatccattttattctggtttattcaggttagatgcatcataagaaatattgtcagggattgggctcaggaggtattttctgtgcaattttgggttggcttgaagtggaacttctgtctgaaagtaatgatataatccgaaaggaaatattaccttttgttacttaaattgttgtagggtcaaaaggaacgtgatgagtgctataagcccatcctggaggagcttaatcgtctatttcctaaccgaagcaaggagaggtaaacttgacttatccctgtgttatgacaataatttagaactaccatacttttttaccttgttctgggtagtgatcttgttttcaaaatcggggtaattaaagacaagggcattcttctcgcacgagagcgattcacgtgacttcagcatggcgtgtttgatcccgctgttatccacgtcatcctcatttttaccacgtctcactgtggtgtgggccggcgcagctgtttaccacacgctttcctcagctgcagcgactttcctccgctgttcaccactcgcccctgccgtccgaccagtgggcccacctgatgcttcctacctgctgttttcgaacgacttgccttccattccatggctatacacgatgcgaggggctgtgatgaaagaaaaaccgctgcggctatggccgcctgccatgcccatgccctgtgattctgaattggataaatattaggacatctcgtcccctctcacaccacacatttactgtggatagtttatgcaagcatttcctttaacctcatatacaaatggaagttgcttgaagcttcattcttgatcaatcattgacttgtgtatttgttgaacttcataggcctccttcatgcttagttcctggtgctgggcttgggagattggctctggagatatccactctgggtaaaagaaaaaaagctcaaataaattgtgaatgagctgatatcatatattcttgaaaattacccttgttttaactcttgaacaggttttgtgagccagggaaacgagttctcgtattacatgatgatttgttcaagtttcattctaaaccagtaggtcaatctaagctatacatattttttttaaaaaaaaaactagcaccttacattatcaagttgttcatcacacaataatatttggtcatgttttatcagcacgcaagaaaccaatgagtggactatatatccttggatacacagcaactgcaattctctttcagacaatgatcaacttcgccctgtttcatttcctgatattcacccctcaaggtaataaagcaccttgttttttctcataagcaccagtatgcttgcaaatgctgtgttaaaattcatcgctctgtacacttgatagcgtatgaccttagttttgtataatataatgtgcatataggacgtcacggttgatgaaaacataaatatattgattacatttataggtaatttaccatttatgattctatatttacaagagcttcatatgaaatcaacaaaaatggctatgtaagagcatttgattagagaaattgaaacaccctatttaaatctggactatttgcagaacctacaaatattctatgtttggatgttgtaatatttgaatgattagttaattgtgcagtttcgtttgaatcctgaatctaaacttcattcaattctagaattcaagtttgatgcttcagcttgtttcagtcattcagtactatttgtgctgtaggtagaaatgtttacttatgttccttgcaaaaggagagaaactgtccgttatctcttgttatgctacatatttatcttatgtttgccttcttttcttttgacagctcagggatcacagaaggattttctatgtgtgctggtgattttgtagaggtctacaatgaagaaagccaagaatgtaagatgacctggtttccttataaactaatcaaaatgagttaattaattttaacctggcttccttataaagggatatgcatcactcaacttagctctttttgttaaattgtaatattgtagtaccatttgccctttgaatcttgtgtggcccaatgaaagcatgccagaaactggaagcggtgggattaaataacaattcaaaaacacagatacgtttcgaacagattttttgcattggggttagtctaaagcatatataaatagagtgacaattgtacagaaccaattcacaatgagaatggatgtgttctgatggaaccccagaaaaagaggacaattttgtgctggttttgtttctgtcagattgtttcgattttaaatcatggccaacaagggaaaagagttgttcttttgtggtggtcttgtttcttgtcatacatacgaagtacattttttaaggggggatattaattactgttattgttcatttgttagcttgcttggatttattttgtaatgctcattaaataaatcaaggtgagagtattgctttaacgttcgtcaaaaactaaattgcaaacgataggcattttcttagaaatgaagtaggaggcagttgcaagccaggtccttgattttatgtattatggagaaggaatgagctcctcaaattaatattgtaggctattgaggcatgcaatgcaataactctgaaactgatgattattggttgaagtcattttgaagtctaatactttaattctgaccttgatgtgttaatttgttctgcttttagttcagatatgtatgattggtaactacgggttttttgccttcttgacattctcacaatactcatattttgctccagcttcatgggatgctgttgtaacatgcttcttcttggatacggcacacaatatcgttgaatatatagagatcatatcaaaagttctcaaggatggtggggtgagtctctttttataggattaaactctgataaactattcttgatgaatcagtgctaatgtttttttgagtcagtttacggggaaatttataattcggtatatgttgtttatttactgtttcttatctgtcattgataattatgcaatttcaaccaacaggtctggataaatttgggtccgcttctgtatcacttcgctgactcctatggaccagatgatgtaattagttctctccccttattatactagttaaatgaatgaatgctatgctaattgaatccttgaaggtgctactatgtcttgaggaacttaatttatctccttaaacacaggatatgtctattgaactgagtttggaagatgtgaaaagagttgcttaccattatggatttgtgatggaggtgagtgttttgcaaaaaaaaaaaagttttgggctataattgaggaaactccaaactatgcatatgcatatgcatagtgcaccaatacgttggatttgtacacttgtatcttgcaaaaaaaagtgcaatacatgtttattatatatatgcattgttgtaaaaaaaaaagagtgaagggttatgattagacagaaagtgcatcacctcactgcaaaaatatgtgaatggattactttgatttgtggttttcaggtggagaaaatgatagataccacatacactgcaaatatgaaatcaatgatgcaggtaatcttttaatctcaacagtcttcactgtggtttaatcttcaaatatctaggaagtgattgaatttatggcaaatatttagaatggcacagtgaaagcttaaaggtgatagtcctgtttgctgcagttggaaacttggtcatttggacttctagatgtccacttgttcctcaatcccttgtaggctcatatagtgttcaactgttgcatagtaaattcaacaggtgtattaggagtgctaggagactagttgtccaaattcagttgttgaatgtatcagttagtggtggagcgtgagccaaaatacatgaaaggccaatctaaaggatacaatttacagaattactacgacacaggaccagttcaacctgcatctgactattcgagcagttaaatgctcttttttgctaagaaaggggagaccaatgccctctttggtcccagcgagggctctgcctctgcctgactcagtactctcagcggatgttcacaatgctagtatgcaatatttcaaagctgccagcttccaatacttgagatttcagctgtactgaattctgttggacgtctaacatcactagttcaatacccatgaattgtttgtgcattttgccaatcttcttgatatttggtaataatggtcttatttatactgttgttgagttgcagaatcggtaccgcgcagcattttggacgatgaggaagaatgcatctcgatcaaaagctcaaaaacaccagtgaggtggagatactctgtttggaacggttggcacaggcttactggctatagatcaaatttcagtcattctatggtgatgcctatcagatttggagacggacaatacggatgatccaattcacgccaccatttttcaccatgatatgaaactatatggatagattgatagtgcatgcgttccattactgcgataaaaccaatctccgtctgccaaaacatttgaatggcacagggaaaaactgttccagttcgatgtatatcaattggccaatgggagcactaaggtatattaataagttcgatggtacgtgttcgaactgtacaatgacactgaattagtaaacggcaaatcaaagagctcaacttttttggactg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0511300, RefSeq:Os05g0511300