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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]] |
| − | GeneName = Os10g0508500|
| |
| − | Description = Similar to Tubulin folding cofactor D|
| |
| − | Version = NM_001071558.1 GI:115482859 GeneID:4349076|
| |
| − | Length = 8287 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os10g0508500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
| |
| − | AP = Chromosome 10:19972428..19980714|
| |
| − | CDS = 19972428..19972721,19972863..19973045,19973463..19973504,19973641..19973910,19974318..19974869<br>,19974961..19975185,19975850..19976055,19976153..19976351,19976581..19976796<br>,19977043..19977090,19977302..19977406,19977542..19977658,19977781..19977963<br>,19978707..19978883,19979129..19979231,19979481..19980028,19980448..19980714<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008403:19972428..19980714
| |
| − | source=RiceChromosome10
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008403:19972428..19980714
| |
| − | source=RiceChromosome10
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggaggaaaccgccgccattcgtacatctggcatccccgtctctgtgtcctccacggcctctgcggatggcgacgcctctgctgatcccactgcctcggccgccgccgccgccgccacggtcggcgacgatgagcacgactcgaaggaggtcgtcctgcgcaggtacttcatccaggagtgggagatcgtctccgacatcctccgccgcatcgtcgacgccggtggcgtcgccgaacccgccgatgtccagaggatccgctccatcatggataaatatcaagaggagggtcaactcctagagccatatctagagagcatcatctctccacttatgctattagtccgttccaaaacaatggaactaggcgcttgcactgatgagctccttgacattatcaagcctctgtgtattatcatatacactctggtcacagtatgcgggtacaaaagcgtcatcaagttcttccctcatcaagtttcagatctagagcctgcagttgctctccttgaggagtgtcataaaatgagctcagcaacagctcttaggcaggagagcacaggagaaatggagactaagtgtgtcgttctattgtggctttatatactggtcttgatcccatttgatatctccagtgtggatacaagcattgctactgctgatcacgtggatgggcctgaaactgttccacttgtgacaaggatattagacatatgtaaggattatctctgcagttctggtccaatgagaaggatgtcaggattgctgctcgcaaggctattgactcgtccagacatgccaaaggttttcagcagttttatggaatgggcacaaaggatcttgttatctgtcacagatgactttgtggatcaatttagatcgattggtatagtggaagcattagcatcaatatttaagattggtaaccggaaagtgctatgtgatgctgtttctggaatttggaatgattgttcagttgtgatgaagactaacattgcatccagaagctctctccttagaaagtttctggtcaaactggcgcaacgagttgcactcattagcttgcctccccgttcaccgtcatggcgctatcagtcgataagtagttcactgggtgcaaacctttcaacttctactgatggaactgggacttcaagtggttcaactaaacaagtgaacattgaccagacagacacatcttctttagaggaagatatggatgttccagaaatcgtggaagagattattgacttgctgttgactggtttgagggattccgatactattgtgagatggtctgctgccaaaggagttggtaggataactgcacgtttaacacctgcattgtcagaggaagttctatcatcaatcttgcagcttttttctcctggggagggtgatggttcctggcatggaggctgcttggctttggctgaacttgctcgtaggggactgttgctgccttctagctttcctgatgttattcctgttataataaaggctttgcactatgatgtacgaagaggtccacatagcattggttcacatgttaattgcagaagagctgcttctgctgcctttcaagagaatgttggaagacagggaaattttccgcatggcattgatattgtgaatgcagcagactactttgcactggcttccagatcaaactcttatctgaatgtcgctgtttttgttgctcaatataaggagtatcttcatccgtttgcagaggagctactgtgcaacaaaatatcccactgggagagaagcttgcgagagttggctgctcaggccctttctatgcttgtacagtatgacatgaactactttgctggatatgcccttgaaaagttagttccctgcactctttcatcagatttgtgcactcgacatggggccactttagctgctggtgagattgctttgaagttgtatcagctcggttttacttttaccacagacatgcagaaagctctgtcaggaattgttcctgcaattgaaaaggcacgcctttatcgaggtaaaggaggagagataatgcgttctgctgtttcccgattcattgcatgcatttctatgtctgggatatccttgaatgagaagacaaagagaagtttgttagaaacccttaatgagaatttgaggcatcccaatgctcaaatacagtgtgctgctgttgatgcattgaagcattttattccaacatatctggtttcttccggtgaaaagactgctaatggcatcatcacgaagtacttgacccttctagatgacccaaatgttgctgcaagacgaggtgcagcacttgcccttggaacattaccatatgagttcttggtattaaaatggatgcctgtcataagtaagctgtgcagctcatgcacaattgaggataagcctgatgaccctgatgctgaagcacgtgtgaactctgttagggggctaattttggtttgcgaaacattaactgcttctgttgaacacagctcaagttttggcgattccatgtattcatacattaaagataaggtcatgcaagctttatttagagcacttgacgattatgctgtagataacagaggtgatgtgggttcctgggtacgtgaagctgcaatggatgcactagaacggtgcacatttattctctgcaagagagataatattgcagtgaaaataacaccagttgctgagcatgagtctaaatcgattgacattgacaccaatgcagttaacaccagatgccaactatttgattctagtattgcacaggatctggttgcaggcattgcaaaacaggctgttgagaaaatagataagataagagaaattgcagtcaaaactctgaagaggattctttacaatgaggaactgtttgtcccatctataccatacagggagctgctggaacaaattatacccaacagtgcagatctggagtgggcagttcctgcagtatcatatccacgatttgtgaagcttcttcaggtcagctgttacagcaagcctgtgctttctgggcttgtgatttctactggaggattgcaggaatctttgaggaaagcttcaacatcagctttagtagattatcttcaagattcagacatcaatacaaatgatgaaggaaaaaacagagaatatctattgagttgtgatcttctatgggttcttgagcattaccagaagtgtgaccgtgtagttactcccacattgaagactgttgaaactctcctcagtaaaaaggttttcttgcgtgaggggcattgtgagttctatagtggactgataaaatcgctgggcccggagctgaagggatcaaaggactttgcaaagttaagcgcaggtctctcaatacttgggtacatttcttcccagtcggatggaaatggcagcacggccttctctcaactcctcacattcctaggccacagataccccaagatccggaaagccgcagctgatcaggtgtacctcgtactgctgcaaaatgatagtttgatcgccgcggaaaatatggaaaaagcccaggaagtcatcgcggagacatgctgggaaggtgatgtggaggaagctaggcgcaagaggtcagaactgaatgagatggccggcttcggcgccgccacttcacagaagcctgggaatgaacaaacaaggaggaaaaccgaagagagaaatgctgcttcaactgacgagaacaaatcttactcttctttggttgatttcagtggatactag</cdnaseq>|
| |
| − | AA = <aaseq>MEETAAIRTSGIPVSVSSTASADGDASADPTASAAAAAATVGDD EHDSKEVVLRRYFIQEWEIVSDILRRIVDAGGVAEPADVQRIRSIMDKYQEEGQLLEP YLESIISPLMLLVRSKTMELGACTDELLDIIKPLCIIIYTLVTVCGYKSVIKFFPHQV SDLEPAVALLEECHKMSSATALRQESTGEMETKCVVLLWLYILVLIPFDISSVDTSIA TADHVDGPETVPLVTRILDICKDYLCSSGPMRRMSGLLLARLLTRPDMPKVFSSFMEW AQRILLSVTDDFVDQFRSIGIVEALASIFKIGNRKVLCDAVSGIWNDCSVVMKTNIAS RSSLLRKFLVKLAQRVALISLPPRSPSWRYQSISSSLGANLSTSTDGTGTSSGSTKQV NIDQTDTSSLEEDMDVPEIVEEIIDLLLTGLRDSDTIVRWSAAKGVGRITARLTPALS EEVLSSILQLFSPGEGDGSWHGGCLALAELARRGLLLPSSFPDVIPVIIKALHYDVRR GPHSIGSHVNCRRAASAAFQENVGRQGNFPHGIDIVNAADYFALASRSNSYLNVAVFV AQYKEYLHPFAEELLCNKISHWERSLRELAAQALSMLVQYDMNYFAGYALEKLVPCTL SSDLCTRHGATLAAGEIALKLYQLGFTFTTDMQKALSGIVPAIEKARLYRGKGGEIMR SAVSRFIACISMSGISLNEKTKRSLLETLNENLRHPNAQIQCAAVDALKHFIPTYLVS SGEKTANGIITKYLTLLDDPNVAARRGAALALGTLPYEFLVLKWMPVISKLCSSCTIE DKPDDPDAEARVNSVRGLILVCETLTASVEHSSSFGDSMYSYIKDKVMQALFRALDDY AVDNRGDVGSWVREAAMDALERCTFILCKRDNIAVKITPVAEHESKSIDIDTNAVNTR CQLFDSSIAQDLVAGIAKQAVEKIDKIREIAVKTLKRILYNEELFVPSIPYRELLEQI IPNSADLEWAVPAVSYPRFVKLLQVSCYSKPVLSGLVISTGGLQESLRKASTSALVDY LQDSDINTNDEGKNREYLLSCDLLWVLEHYQKCDRVVTPTLKTVETLLSKKVFLREGH CEFYSGLIKSLGPELKGSKDFAKLSAGLSILGYISSQSDGNGSTAFSQLLTFLGHRYP KIRKAAADQVYLVLLQNDSLIAAENMEKAQEVIAETCWEGDVEEARRKRSELNEMAGF GAATSQKPGNEQTRRKTEERNAASTDENKSYSSLVDFSGY</aaseq>|
| |
| − | DNA = <dnaseqindica>7994..8287#7670..7852#7211..7252#6805..7074#5846..6397#5530..5754#4660..4865#4364..4562#3919..4134#3625..3672#3309..3413#3057..3173#2752..2934#1832..2008#1484..1586#687..1234#1..267#atggaggaaaccgccgccattcgtacatctggcatccccgtctctgtgtcctccacggcctctgcggatggcgacgcctctgctgatcccactgcctcggccgccgccgccgccgccacggtcggcgacgatgagcacgactcgaaggaggtcgtcctgcgcaggtacttcatccaggagtgggagatcgtctccgacatcctccgccgcatcgtcgacgccggtggcgtcgccgaacccgccgatgtccagaggatccgctccatcgtatgctccttgtgccaacccccttctctctagatgttccatttcgctgaactatagatctatacatgagaacaatgcgtatttctagtaacaatgctccttttctgttcgttactaacttgctttgggttagagaacaaaaatcagtccgttccacagtttcagcgtctattactcaatgcagaaccaaatctgaattgcacagaattttaacccctatttgaattgtgttatgtttcacctaaataagttgagctatataggatgcaatgtaatctgtttgcttctactagttagcgaattgtacactgaaagcagttacagtttatcaatgttatgttatgaactatatgtcaaatcctccatgcttaagagtttggtacaaattaacttcatcttcttatttttttgctaaatagatggataaatatcaagaggagggtcaactcctagagccatatctagagagcatcatctctccacttatgctattagtccgttccaaaacaatggaactaggcgcttgcactgatgagctccttgacattatcaagcctctgtgtattatcatatacactctggtcacagtatgcgggtacaaaagcgtcatcaagttcttccctcatcaagtttcagatctagagcctgcagttgctctccttgaggagtgtcataaaatgagctcagcaacagctcttaggcaggagagcacaggagaaatggagactaagtgtgtcgttctattgtggctttatatactggtcttgatcccatttgatatctccagtgtggatacaagcattgctactgctgatcacgtggatgggcctgaaactgttccacttgtgacaaggatattagacatatgtaaggattatctctgcagttctggtccaatgagaaggatgtcaggattgctgctcgcaaggctattgactcgtccagacatgccaaaggttttcagcaggttatccttgcaactactttgttgcaacttacaactcttatccatacacatttcaaattgctgtagtacatttgagaatttcgtatcaccggtgaactgtcttgtttctaccagtacactgaatatttatattctctgaaatgattgtaatatattgatggttaatatccagttaactatttcagtgtagttctatgctactgtatgataaaggacaatgtttcaagttaccttgattctgtttttcagttttatggaatgggcacaaaggatcttgttatctgtcacagatgactttgtggatcaatttagatcgattggtatagtggaagcattagcatcaatatttaaggtttgtcccgcctttatcttttacttttgcaccaaacatcatactgtaaatttagtagagatagctttttctttagtatttagtactattgttcatttgtcttttctctaaacatgcgatcttgttttacatatatcattcttttaggatgttatcagtagggaatgagcacgacttttaacttttcataaaaaaacaatcattaaattttcctattcccttctttctgcttcatcgtgttgcagattggtaaccggaaagtgctatgtgatgctgtttctggaatttggaatgattgttcagttgtgatgaagactaacattgcatccagaagctctctccttagaaagtttctggtcaaactggcgcaacgagttgcactcattagcttgcctccccgttcaccgtcatggcgctatcaggttttaaaattttattaattgttagtacatcagtatctcgcaatcattactcgtaatttgacctttcctaagtcattgtggggttcagtaattattttatttagtatgatacaactctagaacctttagattgtttttgtagattcatatatcctttagtgaagttccagttatgatgtaaacgccagtttattactggagcatatgattactcgtacagtttactacagaatttaataagacatcgggttgacatgtgattgcagtctgattatattttatgcactgtgcacaactccagatcatatcaaaattttatggagattattatttttaattgttaaatgttgatatatgaaccattcagttggagaagagcttgactttaatcctagaacaccaatcctgttcagtgaaagaaataaacatagcttgctattaacctatcatctaccttattgatctgctatatttctgaataatagacatcttgcagaaaggtgtgatgatttaacacttctcatgaaaaataccgttttcttgggatctacctgctgaagcctgttgaaacatggaaataaatcctggcatgatatctatttgtgattaagtttcaagttttttcacatatttctttttatgggatgctatcatgtttgctctcattttttgtatcattacttccatttgtaggttgtaagacgatgtttccaccattatgttaatcgatttcccttatgcagtcgataagtagttcactgggtgcaaacctttcaacttctactgatggaactgggacttcaagtggttcaactaaacaagtgaacattgaccagacagacacatcttctttagaggaagatatggatgttccagaaatcgtggaagagattattgacttgctgttgactggtttgagggattccgtatgttgtcatcctaatattgttttgtaaagatccgaaatattttctaggtcatgttatacttattctcctttctatttaaccttgaattctgtaataatatttcttgattctctcttcaggatactattgtgagatggtctgctgccaaaggagttggtaggataactgcacgtttaacacctgcattgtcagaggaagttctatcatcaatcttgcagcttttttctcctggggaggtttgttgaagaactcatgtagtttaagacatcatttgactttttaaatattcctcagtttccatctctacctttcaaaagtgcaagtcctgagtgaaccacaagtatataccttatgacttttgggttctgaagggtgatggttcctggcatggaggctgcttggctttggctgaacttgctcgtaggggactgttgctgccttctagctttcctgatgttattcctgttataataaaggtacatactagaatggtaccaaataccacttatacatatatatagatcccatgatatattcttttagatgctaacactggcatcaaaggtgcatgttttctcaattctttacttgataaccaaaatgtttctgattatttggttaaacaagtcttgcctatattctgataaaacatttgaggcaaatccagtgacaattttagctctgcaggctttgcactatgatgtacgaagaggtccacatagcattggttcacatgtaagagatgctgcagcatatgtctgttgggcatttggtcgagcctataccaatttcgatatgaaggctgtattgcaacaacttgctccccatcttctaacggttgcatgttatgatcgagaggcaagttcattctgatttagtcattcatttgtggcatctagattttgtgatgcattctctagcatcttagtattttttttcttactgccgaatcatgtgtgtccttatacatatatgatgtaggttaattgcagaagagctgcttctgctgcctttcaagagaatgttggaagacagggaaattttccgcatggcattgatattgtgaatgcagcagactactttgcactggcttccagatcaaactcttatctgaatgtcgctgtttttgttgctcaatataaggagtatcttcatccgtttgcagaggagctactgtgcaacaaaatatcccactgggtactgtagtactacgacttattaattgtttcttgttcctgcattatatctgttttctgactttgcatgcttcaatctgaagatattaggcgtgatgcccttgaccaaacaagtttcatgatattcgatctcttggcccattgccttagtttgttcctattgtaaatttcagtgagatgagcttatgatttgtcagacgtgatgttggctgactttattttctttctaggagagaagcttgcgagagttggctgctcaggccctttctatgcttgtacagtatgacatgaactactttgctggatatgcccttgaaaagttagttccctgcactctttcatcagatttgtgcactcgacatggggccactttagctgctggtgagattgctttgaagttgtatcagctcggttttacttttaccacaggtaagagatccatttatctagattatctcttgtaatactttttatctgaattgtttaccctataaactcctttgcatgggtgttcattattctatagacatgcagaaagctctgtcaggaattgttcctgcaattgaaaaggcacgcctttatcgaggtaaaggaggagagataatgcgttctgctgtttcccgattcattgcatgcatttctatgtctgggatatccttgaatgagaagacaaagagaagtttgttagaaacccttaatgagaatttgaggcatcccaatgctcaaatacaggtgagagctttctttggtcttgaatcagcaactgaacaaatttcccatgtaattatgcttggttaggctacagtctactataactttccagttctcaggtttatttctaaaaatactccctacattccatattataagacgttttgggtttgtcctaggtgaaacttcatgtttgaccaagtttacatataaaaaaaaacgtagcaagtccacaaaacaaacacacttacaaaatatattcaatggtaaattttgatgaaattagtttggtgttgtagatgttgctatttttttttctataaacttggtcaaacttgaagtacaattgtagtaccgctccaatatatatttaatcaatacactattatagcctagacccactgtgcaaatcaacaatgtaaatctttctccttttctccattgacataataatttctaggccctgagagcaacattgtggctacttcttttccctgttttaataatatattagataacaacataggcttgttgatgtcaattattcactcaaaagtgaccctctcagcaaccacctgtatcttattgtcttgtgttctgttgtttgatatggcactgaacattgtacaagcatgactggtgcatctgtgctttagactgagtgttattctacaattttgtccagtgtgctgctgttgatgcattgaagcattttattccaacatatctggtttcttccggtgaaaagactgctaatggcatcatcacgaagtacttgacccttctagatgacccaaatgttgctgcaagacgaggtgcagcacttgcccttggaacattaccatatgagttcttggtattaaaatggatgcctgtcataagtaagctgtgcagctcatgcacaattgaggtaatgagattacctgagccaaatattaactcattctgttgatttgcttctgggattgtagaactgaaacttcagtttcatgaatatgtaggataagcctgatgaccctgatgctgaagcacgtgtgaactctgttagggggctaattttggtttgcgaaacattaactgcttctgttgaacacagctcaagttttggcgattccatgtattcatacattaaagataaggtcatgcaagctttatttagagcacttgacgattatgctgtagataacagaggtgatgtgggttcctgggtacgtgaagctgcaatggatgcactagaacggtgcacatttattctctgcaagagagataatattgcagtgaaaataacaccagttgctgagcatgagtctaaatcgattgacattgacaccaatgcagttaacaccagatgccaactatttgattctagtattgcacaggatctggttgcaggcattgcaaaacaggctgttgagaaaatagataagataagagaaattgcagtcaaaactctgaagaggattctttacaatgaggaactgtttgtcccatctataccatacagggagctgctggaacaaattatacccaacagtgcagatctggagtgggcagtaagtgattattcatcaatttctcttctgttgttcaatgtattgtttctaatgctggcgttgctgttgttacaagactagttgaggtgcctataactctgatctcataattcccatatgctcaacaatttattcttattgctcaaaaaacttaagttatcatgaaagtggatttaagggtttagatttacagtgaccttgacttgtaagtttatctatttcttgagtaactgatttttatattgttctattgaacaaattttagttgtttaaccattgttgcctcagtaattattttcactgccagtgcacatattatttaaccattgtttaaccattgtgcacatattatttgactaggtggtagtgttatccagatttggctgacaacacatttccttcgttaggttcctgcagtatcatatccacgatttgtgaagcttcttcaggtcagctgttacagcaagcctgtgctttctgggcttgtgatttctactggaggattgcaggaatctttgaggaaagcttcaacatcagctttagtagattatcttcaagattcagacatcaatacaaatgatgaaggaaaaaacagagaatatctattgagttgtgatcttctatgggttcttgagcattaccagaagtgtgaccgtgtagttactcccacattgaaggtaacagaaacataattatattgccgagcggcatgtttcggttgatgatttgaaccaataaattttcacatgattttatatactttttccacagtcgagcttacacatttatcttctttttattaaatgtatgcagactgttgaaactctcctcagtaaaaaggttttcttgcgtgaggtgagtttttactaatgttgtgctgtacactgttagaggctaggaagtttgctgtggcacatttgtgaatgaaaaataagcacaaaagatatttttgttaggcctttaagattgggaggcatggtaaagaaaaagaaaagaaaaagaaatagaacatcataagataagataagaaaaaagaaatagaacattataagatttcaaaggttggaacatgctcatcgctgatcagaatttggagcacataacttcatactgtatcatacttttgtagcttaaatctataacttgaaagcccatgcagtaggaaataactacagaaactgggttagttcatggtattacagaaagaatcttgaaataatcttatgatttacaaggtacacttatacctcctggtcttgcaacactgagcaggggcattgtgagttctatagtggactgataaaatcgctgggcccggagctgaagggatcaaaggactttgcaaagttaagcgcaggtctctcaatacttgggtacatttcttcccagtcggatggaaatggcagcacggccttctctcaactcctcacattcctaggccacagataccccaaggtgaatactttcaccatttgttgcctgagaattgcagaacaccacgcaatgataaattgagctcagatgttctctccaaagtacacaacaccatgcaatgataaactgatctcatatgttatgttctctaccaacttgcagatccggaaagccgcagctgatcaggtgtacctcgtactgctgcaaaatgatagtttgatcgccgcggaaaatatggaaaaagcccaggaagtcatcgcggagacatgctgggaaggtgatgtggaggaagctaggcgcaagaggtcagaactgaatgagatggccggcttcggcgccgccacttcacagaagcctgggaatgaacaaacaaggaggaaaaccgaagagagaaatgctgcttcaactgacgagaacaaatcttactcttctttggttgatttcagtggatactag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071558.1 RefSeq:Os10g0508500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 10]]
| |
| − | [[Category:Chromosome 10]]
| |
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Annotated Information
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Expression
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Structured Information
