Difference between revisions of "Os11g0131900"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
−
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]
−
GeneName = Os11g0131900|
 
−
Description = Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II|
 
−
Version = NM_001072192.1 GI:115483996 GeneID:4349683|
 
−
Length = 6005 bp|
 
−
Definition = Oryza sativa Japonica Group Os11g0131900, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
−
 
 
−
  ORGANISM  Oryza sativa Japonica Group
 
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
−
Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
 
−
AP = Chromosome 11:1435657..1441661|
 
−
CDS = 1436225..1436407,1436587..1436641,1437005..1437201,1437440..1437561,1437649..1437796<br>,1437945..1438014,1438117..1438262,1438376..1438421,1438500..1438552<br>,1439097..1439241,1439858..1439976,1440084..1440155,1440462..1440565<br>,1440707..1440763,1440850..1441042,1441125..1441268,1441381..1441503<br>|
 
−
GCID = <gbrowseImage1>
 
−
name=NC_008404:1435657..1441661
 
−
source=RiceChromosome11
 
−
preset=GeneLocation
 
−
</gbrowseImage1>|
 
−
GSID = <gbrowseImage2>
 
−
name=NC_008404:1435657..1441661
 
−
source=RiceChromosome11
 
−
preset=GeneLocation
 
−
</gbrowseImage2>|
 
−
CDNA = <cdnaseq>atggcttccagagaatccttcatgagtaccattttcttcttcttgcttctgttctccctcggctgcaagtgtatagcttcagagttacacttacatgcgacccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactaccataccggtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagacacttacaagggacatggttttcgcacagaacttatatctatgatgttggacttaaaaccacgattcttgagattccctggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctattggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgatggccttggatattatgaatttctccagctttctgaggatctgggtgctgccccaatctgggtgttcaacaatggaatcagccataatgatgaagttgatactgctgcgattgctccttttgtaaaagacgtattggacagtctagaatttgcaagggggaatgcagattcaacatggggttctgttagagctgcaatggggcaccccgaaccattccctgtcaaatacgtcgcaattggaaatgaagattgtgggaaaaaattttaccgcggtaattacctcaagttttataatgctataagggaggcctatccagacattcaaatgatttcaaattgtgatgcttcatcaagtccacttgaccatcctgctgatttatatgatttccatgtctatactgattctaagactttgttttcaatgaagaatacatttgatagatcatctcgtaatgggcccaaggcttttgtcagtgaatatgctgtttggagaagtgatgcaggtagaggaagtctacttgcttcattggcagaggcagctttccttactggactggagaagaatagtgatgttgttcagatggcaagttatgcaccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactggatgcagactcttttcggtgaatctagcggtgctatgtttcatccagttacaatcacttccagctactctggttctctggcagcatctgcaattacttggcaggattctgaaaatagcttcttaagagtaaagattataaactttgggtctgatccagtgagcctcacgatctctgcaactgggcttcaggcccgtgttaatgcactgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgcttgcccagtccaaactcgtggcagagatgtga</cdnaseq>|
 
−
AA = <aaseq>MASRESFMSTIFFFLLLFSLGCKCIASELHLHATQTAVLKVDAS                    PQLARQIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPHTPSNIDPWSIIGDDS                    SIFVATDRTSCFSRNTVALRMEVLCDNCPAGGVGIYNPGFWGMNIEDGKIYNLVMYVK                    SPETVELTVSLTSSDGSQNLASTTIPVSGASNWTKLEQKLVAQGTNRTSRLQITTNKK                    GVVWFDQVSLMPADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRWRE                    SIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAA                    IAPFVKDVLDSLEFARGNADSTWGSVRAAMGHPEPFPVKYVAIGNEDCGKKFYRGNYL                    KFYNAIREAYPDIQMISNCDASSSPLDHPADLYDFHVYTDSKTLFSMKNTFDRSSRNG                    PKAFVSEYAVWRSDAGRGSLLASLAEAAFLTGLEKNSDVVQMASYAPLFVNNNDQTWN                    PDAIVFNSWQQYGTPSYWMQTLFGESSGAMFHPVTITSSYSGSLAASAITWQDSENSF                    LRVKIINFGSDPVSLTISATGLQARVNALGSTATVLTSSNVMDENSFSNPNKVVPVKS                    QLSNAAEQMQVTLAPHSFSSFDLALAQSKLVAEM</aaseq>|
 
−
DNA = <dnaseqindica>569..751#931..985#1349..1545#1784..1905#1993..2140#2289..2358#2461..2606#2720..2765#2844..2896#3441..3585#4202..4320#4428..4499#4806..4909#5051..5107#5194..5386#5469..5612#5725..5847#acttaacaccaaagcctcggtctgtgtctgtccgccccccaacgcctcgccggcgcccagcttctcttccttccttccttgttgaggtctgaggtcttggatggtggccttatggtgagcgattttggtgaaatcgtttactgctcccccctgcttgacttcttttgtttccaattttgtttctttggttatgcaaacgaccagttcgatgaaatgaccgagtagaaggcaattgattggtttttgtgtttgtttaccctgatgatgagatcatttgaaacctcagctttcctaatccttgccaaattgtctggcgtcaacgcttttgtgattttctaaacaaagcaaatgatttggttatcttgtaagcatggttttggacatatcactgtcttgtctatgtttgcctttcgtttcttctaatggtatcgctgttttcatgccatctagtaatagcatctacttgtccgatgcctatcttccttagttgacttctcatactgtatcatcttctggctttatttgttcaacagacacacggcctgcactagtgtttacagctccaagtatggcttccagagaatccttcatgagtaccattttcttcttcttgcttctgttctccctcggctgcaagtgtatagcttcagagttacacttacatgcgacccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaatattttttgaggtaagccgtgagacatatacagtaattctgtttttcacaattgcactgtatcactatatcctttcctctggcacttttttgttaggatgctcaagtgcattagcatgcccagaataatccaggtagattatacatgttccaccatgtcctgatgataatgatcttggctaatattgtaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggtacttcagttatttttgttgtaatatatgcacttattttgatcgatcttccagataaaacataatttgcttctgaatggacatgaataaattcttctgcagtctgctggaacacaaacatggcttacgaaaaaaaaatccttttgttattttgtctttaatcgaaaattctccatactatctgattaactaaattatgttttccccataaactttaaacatagttatctttttagtactgtaaacttgacacacaaaactttgattaagagcataaactcgatggaaaataatatgccctttttttgaagttatattgacatttagggtttagtataaccaacttatgagttttatgcacaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataacccagggttctggggcatggtatgggcttatatatcgttgttctttagtttgttttcctcacagtattgctgccattttctttccttttctcataaaattaacaagtaaatcatggacctccacatgttctgtttcgatttttcatgtagtgatagctcttttgtgcacttgtgttagtaaacatttgctttcctaacttttgcaatgcttcttttccaatactctgatcacccgtaattgtcatatcaacccgcagaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactaccataccgttagtgccttttctctcaatactgggacaggagaacaaggatgtttgcccattcccattagttttgaaaggattatattgttgcagggtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagacacttacaaggtacattatattttgttgtcaaacttcattactggaaaaggaaaacgatgccatgggctttttatgctatctatgtatagtgtatgataacactttaagtcttcatgggctttttcaagtgcttccaacatttcttttacacatacagggacatggttttcgcacagaacttatatctatgatgttggacttaaaaccacgattcttgagattccctggtatgagctatattttcccattgaaaatcaagttcttgatatgtacatatatgccagacatgtctgggataattgacttgatttacattcaaacaattgtaggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctattggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgatggccttggatattatgaatttctccaggtactagtttacttgacattattcctgcctttcattttcttatcacgtcctaatcatatattgcctttgagttctatatttttctaatgaaaactttgaactccacatcaaagctttctgaggatctgggtgctgccccaatctgggtgttcaacaatggtaataattgccatattttttatatcttgatcaccacagctgacctcctgaatcgacactaaactctttaaatatcaggaatcagccataatgatgaagttgatactgctgcgattgctccttttgtaaaagtatgttctgaactctctattttattttctgtcaggtcagatgcaccttgatttgttaaatagtttccactttagaattcacctgtaacgtcctagctatggctgcacttccatggatatggcatgtgagaaaactgatactatctttactgccatcatagtagtgttccatcttttatctttgcatatctaaatattaaagatcctaagaatgtaactgcatatgatgtgtctcattgaatgatgctaaaactcttgccttattttctcactattgaaatagagctgattatttgtgtaaaaaaggagatggttttgggcttgttcttttactctattagttctcaaagttcttttcaaaaaaattaattcacaatgttcacaaggagtgatgatgtttaacctgaatttgcattctggtatacttacagataacaatgtacctaccaagaaaatactaaatatcttttcttgaattgaagctatgttacttgtcgtaacaccagttttttgtttgggaacatctcttgttgtctctctacaggacgtattggacagtctagaatttgcaagggggaatgcagattcaacatggggttctgttagagctgcaatggggcaccccgaaccattccctgtcaaatacgtcgcaattggaaatgaagattgtgggaaaaaattttaccgcggtgcattcctcaattactttcttattttatcacttcaccatataactgcataaattgaagagccttgtctggaataaattaaggtgtatgatcgaataaaagatatgtacatggaccatgctaatcctgtaattttttttatgaaggtagtcactcaactcactctgtaaataaaggccgcaacttctttatgcagttgtacctgtttccttagaagtggttcattaatttagtcacataaatctccatagcaaaaccttacagggagacatttgttttcactattttaatctgcatataatattactttttttatgccctatgttctccttttcctctgctgtacttcgccaagccaatggtacttgtagtaatatatgttctatttttttgttgttgcaaataaactaggattagtaacacataaaaacaattcctggtagcaaacatactaaaatgtgattattttcatttttagaaaatttgggatgtaaatcatttatatttgatcataatctccaatgataaggcacatgtttgacttgaattgtgtggagaacaactgttgaattctcattttaggtacatgcatgatattctcttatccattatacaggtaattacctcaagttttataatgctataagggaggcctatccagacattcaaatgatttcaaattgtgatgcttcatcaagtccacttgaccatcctgctgatttatatgatttccatgtaaactactcatcctcttgagttgtgttctccagcacttctcattctttgtcacaaatgtcaaggcttttcccatttattaaattgaaacaattccttttttctaggtctatactgattctaagactttgttttcaatgaagaatacatttgatagatcatctcgtaatgggcccaaggtacgttgtatgcccggacttccattgtcgtggaccttttttcatttgtggatatgcttgtagaatagcactgtgaaatctcccatcttcatctaatattttacattaataatccaggatttcatgacatctctcgtatatttgtaggatgaccttggtcatctatttctcaacaataattcagtaatgtccacagttcatctatgtcatgtgtgatgatgtttacatgttttggataatcttggaacctcattgcatctcttgcttattcacttctatctttcttcatatatgttttggttgcaggcttttgtcagtgaatatgctgtttggagaagtgatgcaggtagaggaagtctacttgcttcattggcagaggcagctttccttactggactggagaagaataggtgatctttccttgaaacaatcttttctttctgggtcttgtgacagatcacatttgagctttcctctgggtagggctttattaagatctactaacaaatgcaacaagatattcattgtaacttcttgttggttctttgcagtgatgttgttcagatggcaagttatgcaccactcttcgtgaacaacaatgatcaaacgttagttttgatgactccatggtttctttatttgtgtttttgtttatttaacaagtactgtaataatgcttcaatcaaacaatcaggtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactggatgcagactcttttcggtgaatctagcggtgctatgtttcatccagttacaatcacttccagctactctggttctctggcagcatctgcaattacttggcaggattctgaaaatagcttcttaagagtaaaggtaagaaattttgttctaaacctactctacatctgtaggagattgcgtacctcatgaattgatcttgaaatctcctgtgcagattataaactttgggtctgatccagtgagcctcacgatctctgcaactgggcttcaggcccgtgttaatgcactgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagtaacccgaataaggtaagcaaacatttctgacttcttactggatgtaatgcacatatcaatgtctagtagagtttgtggttttggtcatctgaagccaaagctttgctcatgacaaccaatgcaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgcttgcccagtccaaactcgtggcagagatgtgaagcagcaacacaaggttagcgacagaaacacaagaaatacacgagatgtgatatgcgaataccagaatgctgtccatatatgtgcatgtatcttgaagcactactgtatagtgtaatacacagggaatgatgaataaaattcactcctggcttacttc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001072192.1 RefSeq:Os11g0131900]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 11]]
 
−
[[Category:Chromosome 11]]
 

Latest revision as of 13:45, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information