Difference between revisions of "Os11g0485200"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
−
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]
−
GeneName = Os11g0485200|
 
−
Description = ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein|
 
−
Version = NM_001074446.2 GI:297611839 GeneID:4350530|
 
−
Length = 5346 bp|
 
−
Definition = Oryza sativa Japonica Group Os11g0485200, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
−
 
 
−
  ORGANISM  Oryza sativa Japonica Group
 
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
−
Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
 
−
AP = Chromosome 11:18935208..18940553|
 
−
CDS = 18935419..18935565,18936093..18937205,18937282..18937410,18937672..18937894,18937992..18938138<br>,18938239..18938480,18938568..18938597,18938693..18938774,18938880..18939040<br>,18939110..18939274,18939652..18939775,18940022..18940230|
 
−
GCID = <gbrowseImage1>
 
−
name=NC_008404:18935208..18940553
 
−
source=RiceChromosome11
 
−
preset=GeneLocation
 
−
</gbrowseImage1>|
 
−
GSID = <gbrowseImage2>
 
−
name=NC_008404:18935208..18940553
 
−
source=RiceChromosome11
 
−
preset=GeneLocation
 
−
</gbrowseImage2>|
 
−
CDNA = <cdnaseq>atgtcacgcgagcctgcggcggcggcggaggcggaggacgtcgtggcccgtctcggcaccgacgaggcgactgggctgacggaggaggaggcggcgcgccgcctcaagctgtacgggcctaacctcgtggtcgcccatcacccccaggtgggtggcaagcttcttgctacactaaagtgcatcgtcctgctctggggatgggatcactccttcaccgagtacattaaatacgagattggatgggagtcatgggagcatcttatcttcccctgctccagggagatgttatgtgtcatgttcatcaatttctcgtcatgggcggcattggcggctgcacttgtgtcccttgcccttaactcagctggtcagacaacctatgaactgatcgttatcgtctccttacttgtgggaagcctgtgtgcatgctgtgttgccaagctccttgccaatcgtgctaaggcaccgctggaagctaaagcttttgcgcgaaggaccaaggttctgagggatggaatatggaaacatgaggatgcgaccaatcttgtccctggggatatcatatatctcaagtgtggtgatattgtgccagccaatgcttttgtcctcaacatggcacagatcgacaccaaaaccatccgtcatgaaaggagtgttaactatgtgatgggctcccttatatactatggctgggctgtctcctgtggcgaagggactgctgttgttactgtgacaggcaataacatccccatgagcactctgaaacagctttatccaaaacgattctctcggcctgggcagcttaggaagggtgtcatggctgctgccactttttgcttctgcttagtacttgttggcatcacaagtgaggctcttgttaaattctttttccatcaaagcataggcacgctgcacagtggccactttatgccacttattggtctaataccaatgtcgattcctgctgtgctctacctggcattggcattggactctcagaggctttccaaattgggggttgccagccggggaacttttgctcttgaagacttggctagcatggatgctatgctcttcaacatgactggcactttgacatgcaacaagccctattttgacaaggacaagattgaagtgcttacagaaggtattgataaagatcatgctgtcctgttggctgcgcgggcttccaaagcacacaatgaactgtataaagaaccgattgatgcagccattctaggccttatggatgatccagaacaggcacgagttggcattaatgttatagagcaccgctcccgtatgtttgttgcaatgacattgatgtacatgactacttacatcgatgaaaatggctccaagtgttctgtgctcaaaggtgaccctgcattgatgcttcgtgactgcagttgtagcgaagaagtcagagagcatatacgcaaacgtattgataagctcggtcttgatggatatcaatgtattgctgttggacgtattgttaactctcggttggacatcattattcttctacctttcatagatgatctcagaagcgatagtgcagaagctgttgataatcttactgatatgggtctgagtgtaatagtacttacagaaagcccaatgacaattacaaagcacgtatgtggaagacttggaaaactgggcttaaatgtgttacatgctgactctatgcgggagttggtaagcagcaaaaatgagcttttcttgaatatcaatgggatttctgatctctttgtagaatataaccgttatgttatatcaaatctgagaacttattttggtcgtcgtagtgcaatggttggatatgaattttcggatgttgattctatccgtgaaagcgatattggaatcgcagttgccgatgccactgatagcaccaaaagtgaatctgatattgttttgactgagcatgccttgctgtctgtttcttctgctgttcaagccagtagggaaatttgtcagatcatgaaaggatgcatggtttatgctgtttcatcaactgtccatgcttttgctgtccgtcttattttactcctatggagactcgagctaccctgtttcccgatgctggtgattgctgcttgcaactactgcacatcaactgcaatgttatttgaaagggtgaaaccatcccagtcaccagatagtttgaaagcaaacaagattatcgcaactggtgctgcttttggaagctatattgccctgagtacagtcgtttttttcataatgactactaggactgacttcatatctcacataatcaaagctagattgcttgttggccatgatgaggagattaaatctgccttattccttcaaatgagcattgttaaccatgctattggacttttcgcacattcacgcgatggccactgctctgggcctattgttacaatttcttctgttctatctcaactggtggcaaccgtcattgctgtttatggtgacgtgaactctcctctaccaaagggcattggctggggctgggcaggatttatctggctctacaactttgtcttgcttttgagcctcatgttgatctgtgacctgtgtaaccttgcaaagttcaacatatttgggataacctgcaggaggctgttcactggttggaccgagtggatggagaggtgcaggaggctgctcaacaggggtaaaacgtggatggagatgttgaccttaactgctatctcaggcttgattcttgtctggtcgatatatgcatatcatgtcatgaaggtcccgcagcagtag</cdnaseq>|
 
−
AA = <aaseq>MSREPAAAAEAEDVVARLGTDEATGLTEEEAARRLKLYGPNLVV                    AHHPQVGGKLLATLKCIVLLWGWDHSFTEYIKYEIGWESWEHLIFPCSREMLCVMFIN                    FSSWAALAAALVSLALNSAGQTTYELIVIVSLLVGSLCACCVAKLLANRAKAPLEAKA                    FARRTKVLRDGIWKHEDATNLVPGDIIYLKCGDIVPANAFVLNMAQIDTKTIRHERSV                    NYVMGSLIYYGWAVSCGEGTAVVTVTGNNIPMSTLKQLYPKRFSRPGQLRKGVMAAAT                    FCFCLVLVGITSEALVKFFFHQSIGTLHSGHFMPLIGLIPMSIPAVLYLALALDSQRL                    SKLGVASRGTFALEDLASMDAMLFNMTGTLTCNKPYFDKDKIEVLTEGIDKDHAVLLA                    ARASKAHNELYKEPIDAAILGLMDDPEQARVGINVIEHRSRMFVAMTLMYMTTYIDEN                    GSKCSVLKGDPALMLRDCSCSEEVREHIRKRIDKLGLDGYQCIAVGRIVNSRLDIIIL                    LPFIDDLRSDSAEAVDNLTDMGLSVIVLTESPMTITKHVCGRLGKLGLNVLHADSMRE                    LVSSKNELFLNINGISDLFVEYNRYVISNLRTYFGRRSAMVGYEFSDVDSIRESDIGI                    AVADATDSTKSESDIVLTEHALLSVSSAVQASREICQIMKGCMVYAVSSTVHAFAVRL                    ILLLWRLELPCFPMLVIAACNYCTSTAMLFERVKPSQSPDSLKANKIIATGAAFGSYI                    ALSTVVFFIMTTRTDFISHIIKARLLVGHDEEIKSALFLQMSIVNHAIGLFAHSRDGH                    CSGPIVTISSVLSQLVATVIAVYGDVNSPLPKGIGWGWAGFIWLYNFVLLLSLMLICD                    LCNLAKFNIFGITCRRLFTGWTEWMERCRRLLNRGKTWMEMLTLTAISGLILVWSIYA                    YHVMKVPQQ</aaseq>|
 
−
DNA = <dnaseqindica>212..358#886..1998#2075..2203#2465..2687#2785..2931#3032..3273#3361..3390#3486..3567#3673..3833#3903..4067#4445..4568#4815..5023#gctgcgtctcctcgagcagagcagagcagcggcgtcgccggcgttgctgctcccgcgccgccgcatcctcgctcgccggtgacggtgagcatccatctccctcctcctctccggcgacacttctcgaatccgcgctaaccctagcaattcttctcctgtagatccggaagattctctctctgtgccttgaataaaccctcttaaaccccccatgtcacgcgagcctgcggcggcggcggaggcggaggacgtcgtggcccgtctcggcaccgacgaggcgactgggctgacggaggaggaggcggcgcgccgcctcaagctgtacgggcctaacctcgtggtcgcccatcacccccaggttcgctttgttcctccttccctccccctccctgtttcttttcttttgccctaattgatttcgacgactttcgtggggattgcgctcactaacgcctcacaatcattctatactgttgcagtatgtgtgtggctttgcatctgctgtatgtttcactatctcttgacttcaattggcgagtatatgccctccatcatgtcgaaactctagcaagcaatgaatcgaatgccttttgagcttgtgtattgaactataagcctcatcttttagcttatgcttatgcttataagctaaaatttgaattttcaaccttaaatttggaattgattttgaggtttttcatcttagtatattttcggtttgcaaatatgccgtttcgcttattccgtcaataagcgaaacgatggagtcgtatgatgtcctgtgagagaaaaaaaagtgagaaaagatttttttttttgaaatttttaataaaggttacatacattagcagtttgatgttggtggccttcaacattgtgcttcaggtgggtggcaagcttcttgctacactaaagtgcatcgtcctgctctggggatgggatcactccttcaccgagtacattaaatacgagattggatgggagtcatgggagcatcttatcttcccctgctccagggagatgttatgtgtcatgttcatcaatttctcgtcatgggcggcattggcggctgcacttgtgtcccttgcccttaactcagctggtcagacaacctatgaactgatcgttatcgtctccttacttgtgggaagcctgtgtgcatgctgtgttgccaagctccttgccaatcgtgctaaggcaccgctggaagctaaagcttttgcgcgaaggaccaaggttctgagggatggaatatggaaacatgaggatgcgaccaatcttgtccctggggatatcatatatctcaagtgtggtgatattgtgccagccaatgcttttgtcctcaacatggcacagatcgacaccaaaaccatccgtcatgaaaggagtgttaactatgtgatgggctcccttatatactatggctgggctgtctcctgtggcgaagggactgctgttgttactgtgacaggcaataacatccccatgagcactctgaaacagctttatccaaaacgattctctcggcctgggcagcttaggaagggtgtcatggctgctgccactttttgcttctgcttagtacttgttggcatcacaagtgaggctcttgttaaattctttttccatcaaagcataggcacgctgcacagtggccactttatgccacttattggtctaataccaatgtcgattcctgctgtgctctacctggcattggcattggactctcagaggctttccaaattgggggttgccagccggggaacttttgctcttgaagacttggctagcatggatgctatgctcttcaacatgactggcactttgacatgcaacaagccctattttgacaaggacaagattgaagtgcttacagaaggtattgataaagatcatgctgtcctgttggctgcgcgggcttccaaagcacacaatgaactgtataaagaaccgattgatgcagccattctaggccttatggatgatccagaacaggtaccttcttattaggatctatgtgcttttccttcttgttctttttccagaaggcttaacaaaccaattgatgcaggcacgagttggcattaatgttatagagcaccgctcccgtatgtttgttgcaatgacattgatgtacatgactacttacatcgatgaaaatggctccaagtgttctgtgctcaaaggtgaccctgcattggtaagcaaccaatccactgtcagcaaatccaatgaaactgcccctcctttagtaccacatgcattacttgtttacatttcctcacactagcttataagacatgttgacccaaatcatagcacctcccagctcattctatgagaaagcataaacgcaagcccactgcaaggttgctgggctgagtggattttggctgagcttgtggaagcaaaggaataacatagatgtattcatctcaattatcttcttttcttggcacagatgcttcgtgactgcagttgtagcgaagaagtcagagagcatatacgcaaacgtattgataagctcggtcttgatggatatcaatgtattgctgttggacgtattgttaactctcggttggacatcattattcttctacctttcatagatgatctcagaagcgatagtgcagaagctgttgataatcttactgatatgggtctgagtgtaatagtacttacaggtgatctttgcaatgtctcctatgtttatcttgattttcatgtcattttttatctgcattttatctaagtgttctcacgtttgttttgctatttcagaaagcccaatgacaattacaaagcacgtatgtggaagacttggaaaactgggcttaaatgtgttacatgctgactctatgcgggagttggtaagcagcaaaaatgagcttttcttgaatatcaatgggatttctgatctctttgtaggtctgcttcttgccttgatagttatgttgattattgctacatatgtcactttttgtgaattttttgcttactgagttgctctttcaatttgttattgcagaatataaccgttatgttatatcaaatctgagaacttattttggtcgtcgtagtgcaatggttggatatgaattttcggatgttgattctatccgtgaaagcgatattggaatcgcagttgccgatgccactgatagcaccaaaagtgaatctgatattgttttgactgagcatgccttgctgtctgtttcttctgctgttcaagccagtagggaaatttgtcagatcatgaaaggatgcatggtaagtcacacatgtccattcgcaattcctctgttcgcagatgatttttaggtttttgtatgtgactaatatgtgcttcaattgcaggtttatgctgtttcatcaactgtccatgctgtgagtagacatatagaattataatttccttttatacttttcaaaattgactaatataaacttctgatgctaataaatttgtttatctgttaaagtttgctgtccgtcttattttactcctatggagactcgagctaccctgtttcccgatgctggtgattgctgcttgcaactactgtgagtttgtaacttcgtaatgttgttgtagccataaatttgcaatatataatactttgttgtttgtttcatgatttactatctgccttttattgtaattcccaggcacatcaactgcaatgttatttgaaagggtgaaaccatcccagtcaccagatagtttgaaagcaaacaagattatcgcaactggtgctgcttttggaagctatattgccctgagtacagtcgtttttttcataatgactactaggactgacttcatatctgtaagaacttgtcacccttattatttgtgtgattttctagtaccaaacctaattaacagtatttgacagcacataatcaaagctagattgcttgttggccatgatgaggagattaaatctgccttattccttcaaatgagcattgttaaccatgctattggacttttcgcacattcacgcgatggccactgctctgggcctattgttacaatttcttctgttctatctcaactggtgagttattcccctgctcaatttccaccccaatgtgatatgtggcttttattgcaattgatttagacaaccacctgccaattctcgagtacaatgaacttgcaatattcttgttcctgtgtcctcagtcctaaattggctcagtaacactgatactataatcagaggcaaattatgtttctgaaacagatttgtgatgtggacataacatagtctggtcactgatcaaaccacttgacatgaacaaataaccatataaccatttctctttgtgtacaaagtatttgattattgcttgcagctgtagtaaagtatcatgccaagcttaatttttaagctcaatacatgcatgggttactgaacaaacttattttcaggtggcaaccgtcattgctgtttatggtgacgtgaactctcctctaccaaagggcattggctggggctgggcaggatttatctggctctacaactttgtcttgcttttgagcctcatgttgatctgtatgtatcggaggatattttatttgattttttttatttacatcttttgaagttggtgcatcactgcatgaacctaaaaacttgatatattgtctttcactgcttcatctgaatgcacagtagtgaagccttattgtcaagcactcaagcatgctcaccttttacaatcgtagtagtgaaatttgggagttgcatatctgtcaagagttcaatttagtctaatctagttgtcacgttctttggcaggtgacctgtgtaaccttgcaaagttcaacatatttgggataacctgcaggaggctgttcactggttggaccgagtggatggagaggtgcaggaggctgctcaacaggggtaaaacgtggatggagatgttgaccttaactgctatctcaggcttgattcttgtctggtcgatatatgcatatcatgtcatgaaggtcccgcagcagtagggtggcacttgacaggtagccttgacattaacatatagctttaggtcgcaaattagtgactaagcaatgtagcaatgtatattattaacccgtgtaaagtaaatgtcatcgacatggttttgtttctgtctttttcttttttcttttcttgggtccgggcttctactgccgtataattttgataagagggaagtatatgggtggtcaacttgtgcggatgtgtcattcgaatctgaactctcaaaatatattttgggtatcaaacttgttttgggtgtcatgtaggcccaaacgagctctgacctgttttatgcacggatgtg</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001074446.2 RefSeq:Os11g0485200]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 11]]
 
−
[[Category:Chromosome 11]]
 

Latest revision as of 13:54, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information