Difference between revisions of "Os05g0545600"

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(Created page with "{{JaponicaGene| GeneName = Os05g0545600| Description = Similar to Smad nuclear interacting protein 1| Version = NM_001062749.2 GI:297604849 GeneID:4339499| Length = 4306 b...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0545600|
 
GeneName = Os05g0545600|

Revision as of 20:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0545600

Description

Similar to Smad nuclear interacting protein 1

Version

NM_001062749.2 GI:297604849 GeneID:4339499

Length

4306 bp

Definition

Oryza sativa Japonica Group Os05g0545600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27155923..27160228

Sequence Coding Region

27155925..27155975,27156578..27156609,27156896..27156962,27157150..27157207,27157363..27157469

Expression

GEO Profiles:Os05g0545600

Genome Context

<gbrowseImage1> name=NC_008398:27155923..27160228 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27155923..27160228 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgtgaatcccgccagtcaccgaggtcatctagaagtgcagcacatggtgaggatacaagctctgtaacagatgcagcgtcacggagtgttgatcctgattctttggtgaagatgaatgctactgcagaagctctggaagcaaaagaaaagcaaaaaccatcatttgaattgtctggaaagcttgctgaggagactaacagagttgcaggtgtaaatctgttgcattcagaacctccagaggctcgcaagtcagatattagatggagactctacgtcttcaagggtggtgaaccactcgaaggtagttattcttga</cdnaseq>

Protein Sequence

<aaseq>RESRQSPRSSRSAAHGEDTSSVTDAASRSVDPDSLVKMNATAEA LEAKEKQKPSFELSGKLAEETNRVAGVNLLHSEPPEARKSDIRWRLYVFKGGEPLEGS YS</aaseq>

Gene Sequence

<dnaseqindica>3..53#656..687#974..1040#1228..1285#1441..1547#gacgtgaatcccgccagtcaccgaggtcatctagaagtgcagcacatggtgaggtgtgtaatgatatctgacccttttcttatacatatccacctgttagttggcgtagtgtgttcttttgtttcatgattgtcccttgtttctgttctttgtctgataacctgcacccaaatgaatagaagtgaaaaaaaattactacctccgtacttgtaaaggaagtagtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagttgagtttgaaaatgtaaaaattatacgaatagatttgtcttgaaaaatacttttataaaagtatacatatatcacttttcattaaatatttttatagaaacaagaagtcaaagttatgttttggagaccgtgtcgctgtccaaaacgacttcctttacgagtacagagggagtacgccttgttatcagcattgttgacactaaacttgtgggtctgtattccatgtaaacccttcttgcttcagagttcagattctagaggatataattagttgcccgctatccttttcatttcataccaatttggtttcttttcatgtttgctatcatatatggcccgttagttgcaacctaaactttgttttgatttatttcaggatacaagctctgtaacagatgcagcgtcacggtaagcatgcaaaactctatattcaatacgaattgtaaatttttagtagaagcattgcttgcaattgttttcttgttgtatcaatggggctacgcgtgttatgggtgtcataccctcttgctggaatggttttgaacttttgatgcatatcagcatatccgttaagcaactgtagcagtagtacctaaaacaaacaaatgtatatttgaccagctacatgagcgcaatgtttttgtacctgaaattttagaactgaaaatattatatttgatactattttggccaggagtgttgatcctgattctttggtgaagatgaatgctactgcagaagctctggaagcaaaagaaaaggtagggcatactccatgatgaaatttaaaataataacaatcttccttttgttgtgtacagtttatttatatgatgcttgctgttttcgcagatacaaaatacttgccatgtcagctttctttttatttaacctttctcttcatttgtcatacactagtattttaataatttcattggtgttttgcagcaaaaaccatcatttgaattgtctggaaagcttgctgaggagactaacagagttgcaggtgctgttttgaagccctatatctttctttttggtcatgaacctaaatgttacactttacattaatgtttgtttaaccaccaatgagaatttgtaattccttgttctttgctgtattgcattgtcctcagagtttgcaatttacttccatttcaggtgtaaatctgttgcattcagaacctccagaggctcgcaagtcagatattagatggagactctacgtcttcaagggtggtgaaccactcgaaggtagttattcttgacttgttactctatatatgaagctaacttttttccttttgtcatgctatctgttcgagttaatagtttttaataaatagaagaaaaaaacattttttggatttgccagtctgtagaggcatgttcttgtctagttcaacagctgtttctctatttcccttcccaacatggccaaaccaaaagtaggttctgttaaaagcagtaagcttaactgactgtgatgaagcgagtatggaacataaaaacattttcgaactagcttaatttcggagagttttggaacgaaccatttaacgtgagcaaaggcactaacgagtgggtcactatgatatgagcttgcattgaatcagtatcattatttacattttccccggggagtaaaagggctctttcttttctagagtaaggtcgatatgtgtacacggcacagccacccaagttaaatgcatgcgtgtgtgcacgtgcctaactagagtggaggtctagatctcataaaaggtgttcacatgctttgagaactaaacatgcccttatctgtggcttagttgtctagccctggggaaaggaaagagaacctttgttcaatcgatggatcaaacacaggaccattggtttgtaataatgaagcctgcctagtgctttgctattgttcagttccttacgatacactggcttgtgaatatatccaatgatactgtttgagcattggtattgtatggatagctcactagttttagttttgaacggaagtgaaataactgaagtaatgaagtttattgtgatgaacagcaagttaaaggttgggcattatagtggtataaattaaatgtgtacggtggtaaaaaaattcacgtgcttacattagtgattaaatacttcagttttgctcttcttgtttgactgtgtcttgtgatgctatcttgattgaacagaaccattatatgttcaccggatgagcagctacctttttggaagggaacggaaagttgcagacatccccacagatcatccctcctgcagtaagcaacatgcagttcttcaatataggtaagcatagcaatcttattgttttttgcctttactagcatattgcctgtgcgtggcaacaggattttaaataaagaaaattatcattaactcattattatcatcattttctgtgtatatcgccccttaatttatgtatatatttgttactgacatgtgcactgtcctattttcttctcacaaaaagtaggaagttggtggtaggggtggttgacatgtaggccccccttttctattccaaaaaaactagggagctggtggtggggtggtggcagattcaccactcaccatcaccactgctcccttttaaaaggagtatagattgagaaataatattgtgattcactcatctctttgccttttcagacttgtagagaaggagcagccagatggcatgatgtcaaagcaagtgaggtactccttgctagtaacgcatatattttttttaataacaagtactaataattcatgattatcttagttctgtatgctagtctagattatgatgttttttgctgctttgtttgataggccttatctgatggatcttggtagtaccaatggaactttcattaatgtaagtcctccagtgatacttttactactaatcagatacactagtcgcatttctaataatattttctacccagtcaatatttatgttttgatttttttttcaggagaatcgtattgagcccagccgttattatgaactctttgaaaaggataccattaagtttggcaatagtaggtatgatcaattaaagaaagcatcacttttttgtttatttgtatattgctcaatgtatatgtatctttggtatgtgatgacttaaattaacaacttattatgaaagtgacagtctggcttttggcattctctttaattagagcttttattttgatttgtggtactcttgggataaacattttttctccaataatctaagtaatatctttgtaaactacgcctaattgtttttctcaatacaatttccaaatgaatctttaggtggtatattaatgtttataaatatcaaggaatctcaaaatgtctacattatggaaacataattttcctttatggagccttgacttgcaagctcaatcatgtataaatgtataacatatgttcggagctgtggagattttgaagtttgcacacagtgccccttcctagttcatacggttttcatccttcagaagcctcatctttttgttcttagatggatggtactatttctaatccatatttagggcccttttgagtctagttgcccaaaagtaaatataatataatgatgatcagcctctgcttctatatgcctccttactaaccccgttcatctaaaatctgacaaatgttttattgttttttttgcagccgggagtatgttttgcttcatgaaaactcgaaagattgaggattgaaattgctggaaactttgctccattgttacctgagattttgacgtccctctgctgcttgttgtttgtactatggtttcagtcgcctgaatatttttcaagaatgcctgaaggaacatggcagaggccggtaatcttccgttacatttataggattctagagcctagacttgttttattatccagtggttgatctagtaccgctactgacttcatggttttgtcaaatataatgtcatattgtcactgccatatcataattataatctgcaatttgtgactagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0545600, RefSeq:Os05g0545600