Difference between revisions of "Os05g0558400"
(Created page with "{{JaponicaGene|
GeneName = Os05g0558400|
Description = Similar to Branched-chain-amino-acid aminotransferase 3, chloroplast precursor (EC 2.6.1.42) (Atbcat-3)|
Version = NM...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0558400| | GeneName = Os05g0558400| | ||
Revision as of 20:14, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0558400 |
|---|---|
| Description |
Similar to Branched-chain-amino-acid aminotransferase 3, chloroplast precursor (EC 2.6.1.42) (Atbcat-3) |
| Version |
NM_001062830.1 GI:115465390 GeneID:4339583 |
| Length |
5977 bp |
| Definition |
Oryza sativa Japonica Group Os05g0558400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:27860380..27866356 |
| Sequence Coding Region |
27861809..27861919,27862174..27862262,27862401..27862575,27862697..27862873,27862969..27863100 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:27860380..27866356 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:27860380..27866356 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagtacggtgcagcaacgcgtggcgcgctcctcgcggccgccccgctctccggcgcccggcgtagctggttgcccctctcatcgccgccgtcgccgccctctattcagattcagaatcgactttattcgatatcgtcgcttccactaaaggctcgaggcgtgagaagatgcgaggcttctctagcaagtgactacacgaaggcatctgaggtagctgatttagattgggagaaccttggttttggaatcgtgcagaccgactacatgtatatcacaaaatgcggacaggacgggaatttttctgagggtgaaatgattccatttggacctatagcgctgaacccatcttctggagtccttaattacggacagggattatttgaaggtctaaaagcatatagaacaacagatgactctatcttattatttcgcccggaggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcaaactgttttagcaaacaagagatgggtgcctcctaccggtaaaggttctttgtatattagaccgctactcatgggtagtggtgctgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcgcctgtggggaactactttaaggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctggtggaactggaagtgtgaagaccataggaaattatgcctcggtcttgatggcacagaagattgcaaaagaaaagggctattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaaggaaaagtatcattgatgttgctctgagcaagggtttccaggtcgaggagcgacttgtgtcagtagatgagctgcttgaagctgatgaggttttctgcacaggaactgctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagggtcgaatatgctggcaacaaaggagttggtgtcgtgtctcagcagctatatacttcattaacaagcctgcagatgggccaggcagaagattggctagtctggactgtgcaactgagttag</cdnaseq> |
| Protein Sequence |
<aaseq>MEYGAATRGALLAAAPLSGARRSWLPLSSPPSPPSIQIQNRLYS ISSLPLKARGVRRCEASLASDYTKASEVADLDWENLGFGIVQTDYMYITKCGQDGNFS EGEMIPFGPIALNPSSGVLNYGQGLFEGLKAYRTTDDSILLFRPEENALRMRTGAERM CMPAPSVEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYTFII FVSPVGNYFKEGLAPINLIVEDKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYSD VLYLDAVHKKYLEEVSSCNIFVVKGNVISTPAVKGTILPGITRKSIIDVALSKGFQVE ERLVSVDELLEADEVFCTGTAVVVSPVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTS LQMGQAEDWLVWTVQLS</aaseq> |
| Gene Sequence |
<dnaseqindica>1430..1540#1795..1883#2022..2196#2318..2494#2590..2721#2993..3091#3505..3621#4455..4550#4945..5057#5604..5724#gcctccccaatccgtcccgtctcctcgcccgccgccctcgactcccgtctcctcgcctgccgctggcgccgatctccatcctgctagcagaggtggcgccggcgtcctcctcctgctcccgccgcattcgctcaccggtgagcatcctaatccatcccatccggcctcggcctcggcctcgaatttcgtctcctcacccgccgcttgcgccgatccccatcctgcgagcagaggtggcgcccggcgtcctccttctagcttccaccgcatcgtcgctcgccggtgagcatccctccctacccacacctcatcaggtattctgctttatccctcaaaaagtttgggggttcaaccgaaacagggttagatctgcctctgcccagctccacctactttcaagttgttaattttgatttccgtttttagcatatgtaatttggttactgaatctcatccaaacacccttatagaacgaaaaatgtaagctcacataatttgtactcatccaaactcacgtaaatttctttaagaagaatctagaccacaaactacccatagtcacacaaaatatctttttatcaacttatattcttataagtaatttttattccacaaaatttctaaaggacatactgtgacacttggcattaatctaatttaacttttttttctttgtcaggttataaattttctaagacatttgtgccacttggcatgaatctaatttaacattctttctttatcaggttataaattgaaaccattgaacgtactttgtcttcccgtccctaaaacattgtgatatatctataatattttaatatttttaattttaaaaataatttaaactaataatatagatatttaaattaggtaattaataaattcaaatcaactatagtttagaataaaaaataaaatgatatatgccaagtacaatctaataacaatagaatgttagaaacaatatgaattcaatatttttataaattttaagtacgattcatatataaaactaaagaaaaatatagatttatatataagtgagaacataataaaatgtaaggtaaaattattaaaggaaaaatattattaataaacaatgatgttgatgtatttctaaatattttcacgtattatttattaagtgtcaatgattgaaatggatgatttaccccagccactgccatttgaggcccacacagcgttggccccaccagtcggtctcacatcggctacaatggctagaaggttctgtgagtaaagccgcttccccatttggcccccgtgccattcccgtccgatttggccatcgtcgtctccgtctccgctgcgtctccgctgcctctcccgcgccgccgccgtcgcagtagccgcagaaaccctagaccccggcgagagagcgggggagctcacgggagagcagcaaatggagtacggtgcagcaacgcgtggcgcgctcctcgcggccgccccgctctccggcgcccggcgtagctggttgcccctctcatcgccgccgtcgccgccctctattcaggtacgcgcgtgactaggccggtattttggtttgcacggtctcctggatgcgtttgtgctgtagatttcgtggatcatggtggctagattggcatgtacggtcgaactggagatttaggatttggattatgttgttgtaggtggggtttgagaagtatttgtggagattaaattgatgaagtccatgctgttttttttatgttcgtttggtattaaaatactatatttgatactggtgttttctcgctggtgcagattcagaatcgactttattcgatatcgtcgcttccactaaaggctcgaggcgtgagaagatgcgaggcttctctagcaagtgactacacgtgtgtgattcttaccataaactgcatgattcgttgaaccctccccctccaggcagggggacctgcttttcaaattcgacgatgtgttggtcatttctttcaggaataattctgatggcaactcttgcatattttcaggaaggcatctgaggtagctgatttagattgggagaaccttggttttggaatcgtgcagaccgactacatgtatatcacaaaatgcggacaggacgggaatttttctgagggtgaaatgattccatttggacctatagcgctgaacccatcttctggagtccttaattacggacaggtttgtattggaggtagatctccttgcttcatatatcctgagtacattgtggtaactgaagataaggaaaattgagcatttttaaatactttttgtcctaaaagattatgattatttgtagggattatttgaaggtctaaaagcatatagaacaacagatgactctatcttattatttcgcccggaggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcaaactgttttagcaaacaagagatgggtgggtttactgtaaaaaataaatcatttcatagtgggctaggccgctgttcatactcttcatttaatcatttgttaaataatttttaattccaggtgcctcctaccggtaaaggttctttgtatattagaccgctactcatgggtagtggtgctgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcgcctgtggggaactactttaaggtttgtgttttttctttaattctgctccctctattagccgcagcgttgttgccataaataaagaaaagctatggtagatactgttataatctgcattctacttgacactgtgtttctgaatatatatcttgcagcaacttgacctatgaatttatgattttttttccacttttgttggttgagataactgatggttgaatgtagaatttctaaacagctcgtgtatcattgatttttttttttaatttaatttgttcactcatatcttcaggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctggtggaactggaagtgtgaagaccataggaaattatgcctcggtaattctacagtcaagtttgaaacccattacttacagctttgatgcggaagttattgtcatggctatttctgcaacttcgctacctgatatttctatttctgatgtttttgatgtaatatttttagttcaaatctgcaaatcttaaactacagaacagtcattctattaatgtgaacatgtgattgaaaggagtactttgtcagtgcaattatcttaagaacatacagccattatgaatgaagctgtgaaatgaaaaataattgaaccatcagatatatttcaaatggaatgctattttatatgacgacttatatctccttgctatcttatcattattattttctgctatcttgtatgtcgaattctgttattattttcactggctttaattcatatactgtctttgcataggtcttgatggcacagaagattgcaaaagaaaagggctattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaaggtgtgtttatgctgtcaataatacttgttagtttgatttgagcactttctcctgtaggtccagctaatgcctttttagttctgaaagctaccacagtaaattaaccaatgctaagatttgtaacctactatattaacgatcagctttgttttctttactgacagatgatgtcctttttatatctgtatagattaaagaagtttcaaataaatgaaatgagtcatacgctctttgaagtagatatttgatactcttggattgaacaggcttctggctcaaaacttttgaaaatctgtaacagatagcatgatagtatccaaaaaatatagatgtgttttatgtgttagttgctagcaacatccattagtaaatgcataccctgtgggttagtatattcctataaatgatggagataatgtgtcaagggatctaatttcataacattcaaactcaaaactgttaccctctaccatgcataagcctctgtgaattgttacctaaatgaaaacaacaggcatatccacaacacatggtcatagatattggttcgctagcaatacggtgccatgactattctataggaataggataataccgtactaacaattggttgttctatacctactaggttcagccaggttgtctgtgtcatatcctgaatgacaaactattgttgtatttgttttagttcacagtggactttgtatttccattgcagacaaaacatttatttcttatttttgcgtaaggatagtcagcaaattgaaggaatatcttatacatgctgcctttaactgagatctctttattatttttcttggcttttgcaccagggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaaggaaaagtatcattgatgttgctctgagcaagggtttccaggtaaattaatcatcaatcccatgaactaacaagcaagatgttttactatcagtgtagctcaaattagtagcctgtgatttgatagctttgacaacagcattaggtattcaacattgatcctttcgtatttgcttggtatccaagtccatgtttctatttgtccatatcatccttcatgttcgttgtgagggttatctatctttcaatctaccaagattcatgattaggttcttatgagctacggctacatagaagaagatggaacctatttttcctagcgatgttgatccaattagaagcagcaaaacactgttctcaatctgttactgaaaattgttacatctattctcagttttttgggaaatcttctattaatgtatttggtttcttgaaggtcgaggagcgacttgtgtcagtagatgagctgcttgaagctgatgaggttttctgcacaggaactgctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaaggtgatactcttatccttccttgcatggttccaagaaattagcaagcatattacatgaaaattagattatataacactaaaatagcaacaaaacaccacccaagcaagttcaacagcctaatgcaccatctaattcctaatcgtggtggctaccaggctcctaggcggcacccagtgccgacttttagaacattgctttccttgaaatttcagctgtttgctgtatgtgtagtcaaaagtcaaaattgttttctttcttaacacccatattatgtattgttcctcaaatatatcaccaattaagaactatctaatgggccgaaacctagccaatacttcactccatgttccttgaataagggaaccatcaaagccatataaaaacaattgaaaggtgtatattattcactagtggctagtaagtcgtggctaacctcttttgttggatcgcctactaagatggacttgtcttggtaaaatttccaaagtcagagagagcttgttcttccaagttccatcatactgtccaatggatttttcattgcagggtcgaatatgctggcaacaaaggagttggtgtcgtgtctcagcagctatatacttcattaacaagcctgcagatgggccaggcagaagattggctagtctggactgtgcaactgagttaggaagtaataaaatgttcatcaacatcaaaagatggacatgattatgatcatgtgtatccttcagttttgtagttttgttggtgtgacatcctgctgtatatgtatagacggcagtgcattagcgcgaagcagttttgctaaggaacgacaccatgcatccagcttttatgccttttgcatgagaaatcaaacgtggaaggctttcctgactgaaatatcgacaattataaaactattttgctatgttgattac</dnaseqindica> 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