Difference between revisions of "Os09g0558900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0558900| Description = Similar to NADPH-cytochrome P450 reductase (Fragment)| Version = NM_001070449.1 GI:115480640 GeneID:4347838| Length ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0558900|
 
GeneName = Os09g0558900|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0558900

Description

Similar to NADPH-cytochrome P450 reductase (Fragment)

Version

NM_001070449.1 GI:115480640 GeneID:4347838

Length

5664 bp

Definition

Oryza sativa Japonica Group Os09g0558900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23044132..23049795

Sequence Coding Region

23044391..23044471,23044748..23044861,23044944..23045066,23045375..23045452,23045531..23045680
,23046538..23046634,23046712..23046863,23046932..23047015,23047108..23047336
,23047447..23047539,23047621..23047815,23047970..23048039,23048569..23048605
,23048687..23048770,23048861..23048918,23049041..23049117,23049218..23049277
,23049358..23049720

Expression

GEO Profiles:Os09g0558900

Genome Context

<gbrowseImage1> name=NC_008402:23044132..23049795 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23044132..23049795 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactccggcggcggcggcggcggcggggcgctgaggccgtcggcgctggacctggtggcggcgctgctcacggggcggggacgaccggaggaggaggggtggccgccctcgctcgccgagaaccgccacctcatcgtcctgctcaccacctccctcgccgtcctcgtcggctgcggcgtcgcgctgctcgtccgccgctcctccatctccgcgcccgccgtgagggcgcaggagccgcagccgcgggcccccgcccccgcgaagaggaagcaggaggccgagcctgaccccgacgacggcaggcagagggtcgccgtcttcttcggcacgcagaccggcaccgccgagggcttcgccaaggcgcttgcggaggaggccaagtcgaggtacgacaaggccgtcttcaaggtgctcgatctggatgagtatgctgcggatgatgaggagtatgagcagaagcttaagaaggagatcatcgccttgttcttcgtggcaacgtatggggatggggaaccaactgacaatgcggcgaggttctataaatggtttggagaggggaatgagagaggtgaatggttgagtaatcttcggtttggggtctttggcctcggaaataggcagtacgagcattttaacaaggttggaaaggtggttgaccaactcctcgctgaacaaggtggaaaacgcattgttcctcttggtcttggagatgatgatcaatgcattgaggatgacttcaatgcatggaaggaacttctatggccagaattggataaattgctccgtgttgaagatgataaatcggcagcaccaactccctacacagctgctattcctgaatatagagttgtattggtcaagccagaggaagccatgcatatcaacaaatcctttagtctcagtaatggtcatgctgtatatgacattcagcatccttgcagagcaaatgtggctgtgcggcgggagcttcacacgccggcttcttaccggtcctgcattcatttagagtttgatatttcagggactggtcttacatatgagactggagatcatgttggtgtatatgcagaaaactgcacagagactgtagaggaggtagaaaatctgttaggttattcaccagataccttattctcaattcatgctgaccaagaggatggcactccactttttgggggttctttgccacctcctttcccgtccccctgtactgtggggactgcacttgccagatatgctgaccttctgagttttcctaagaagagtgctttaattgctttggcttcccatgcatctgatcccaaagatgctgagaggctaagacatctagcatctcctgctggaaagaaggagtattctcaatggatagtttcaagtcaacggagtctcttggaagttatgacagagttcccatcagcaaagcctccacttggtgtcttctttgcagccattgctcctcgactgcagccgagatactactcgatatcttcctcaccgaggatgactccaacaagaattcatgtaacatgtgcgctagtgtatgggcaaacccctactggaaggatccataaaggagtttgttctacttggatgaagaactcgattcccttggaagagagccaagaatgtagctgggctccaatttttgttaggcagtcaaacttcaaactgcctactgatcctactgtgcctattataatgataggtcctggaactggtcttgcaccttttaggggcttcttacaggaaagattagctctaaaagagactggtgtggaactaggccatgccgtcctattctttgggtgcagaaatcgaaagatggacttcatatatgaggatgagctcaacaattttgttgagaccggtgcgctgtctgaattgattgtagccttttctcgtgagggtccttcaaaggagtatgttcagcacaaaatggcagagaaggctcccgagatttggagcatcatttctcagggtggttatatttatgtctgtggtgatgcaaagggcatggcaagagatgtacaccgcacactacacaccattgtgcaggaacagggttctttggacaactcaaacacagaaagctatgtaaagagcttgcagatggaagggagatacttgagagatgtctggtga</cdnaseq>

Protein Sequence

<aaseq>MDSGGGGGGGALRPSALDLVAALLTGRGRPEEEGWPPSLAENRH LIVLLTTSLAVLVGCGVALLVRRSSISAPAVRAQEPQPRAPAPAKRKQEAEPDPDDGR QRVAVFFGTQTGTAEGFAKALAEEAKSRYDKAVFKVLDLDEYAADDEEYEQKLKKEII ALFFVATYGDGEPTDNAARFYKWFGEGNERGEWLSNLRFGVFGLGNRQYEHFNKVGKV VDQLLAEQGGKRIVPLGLGDDDQCIEDDFNAWKELLWPELDKLLRVEDDKSAAPTPYT AAIPEYRVVLVKPEEAMHINKSFSLSNGHAVYDIQHPCRANVAVRRELHTPASYRSCI HLEFDISGTGLTYETGDHVGVYAENCTETVEEVENLLGYSPDTLFSIHADQEDGTPLF GGSLPPPFPSPCTVGTALARYADLLSFPKKSALIALASHASDPKDAERLRHLASPAGK KEYSQWIVSSQRSLLEVMTEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRMTPTRIH VTCALVYGQTPTGRIHKGVCSTWMKNSIPLEESQECSWAPIFVRQSNFKLPTDPTVPI IMIGPGTGLAPFRGFLQERLALKETGVELGHAVLFFGCRNRKMDFIYEDELNNFVETG ALSELIVAFSREGPSKEYVQHKMAEKAPEIWSIISQGGYIYVCGDAKGMARDVHRTLH TIVQEQGSLDNSNTESYVKSLQMEGRYLRDVW</aaseq>

Gene Sequence

<dnaseqindica>5325..5405#4935..5048#4730..4852#4344..4421#4116..4265#3162..3258#2933..3084#2781..2864#2460..2688#2257..2349#1981..2175#1757..1826#1191..1227#1026..1109#878..935#679..755#519..578#76..438#cgtactagggccaccaccccgcacgcgcgcgccgccgcctccgcctccgcctccgcctcgatcccatcgcgcgctatggactccggcggcggcggcggcggcggggcgctgaggccgtcggcgctggacctggtggcggcgctgctcacggggcggggacgaccggaggaggaggggtggccgccctcgctcgccgagaaccgccacctcatcgtcctgctcaccacctccctcgccgtcctcgtcggctgcggcgtcgcgctgctcgtccgccgctcctccatctccgcgcccgccgtgagggcgcaggagccgcagccgcgggcccccgcccccgcgaagaggaagcaggaggccgagcctgaccccgacgacggcaggcagagggtcgccgtcttcttcggcacgcagaccggcaccgccgagggcttcgccaaggttggatagattttctcgctctctgtctgtcacctctcgtgcagcaaaaccctgggtcttaattggttgcggattcgcaggcgcttgcggaggaggccaagtcgaggtacgacaaggccgtcttcaaggtgctcgatctggtaagccgccacgatttgccactaacgctgcttcagaatttcatgtgcttttgcattctatgtattgattgattcatgcctgtttcgttctggggttcaggatgagtatgctgcggatgatgaggagtatgagcagaagcttaagaaggagatcatcgccttgttcttcgtggcaacgtaggtgccatctccactttttactatacttctgacgggatattgattaattcaggagaaactagaatggttgaattttgattccaatgaatatctgagttgcattcttgttctcgttgaaggtatggggatggggaaccaactgacaatgcggcgaggttctataaatggtttggagaggtttgctctcaaatccacagttcatatggccctttcatgggtgagcgttgtattttctgttgacggcctgtttgtttggctggagtgcaggggaatgagagaggtgaatggttgagtaatcttcggtttggggtctttggcctcggaaataggcagtacgagcattttaacaaggtttgctggtgcttctacattgatattgtgcttttatatagagcccaatttgtatacttacattgtctttttaaactgaaggttggaaaggtggttgaccaactcctcgctgaacaaggtaaccatcgttcgaataactacaatgcactatttttttcatctatattacaaaggcataactttgcctgtactgttcatgctcacctaagaattgtatgccactaaacattgtcagaaattatactgtatgagaagagtacaggataagggatacaacttatctaatctttttatgtaggtagttagtaacgtgctctggaaagcatcataattttatcagggtggtttgctactaggatcatatgctttaagactttaatgctgtgccttttttgtcttcatccttttctgtctaccgatattctgtagagtgttttagactcagaaggggagctagtattaatgtagtgtaagtgtgcaactaaatcaaatcggacttgtctccgatagatctgaacaacaggtttaccatgtaataattcagtgagatattgttgatctttgcaacattctggtcacatgattttcctgtctgtcgtgttctgtatcatttggtggtggttaacttttctccacatctcttttaggtggaaaacgcattgttcctcttggtcttggagatgatgatcaatgcattgaggatgacttcaatgcatggtacgtaccgtaattagcttagtctttgtctcaactttgaactcaggcatcattttgacactgattctatttgtgcacactttttaaacattgatatcaactttagactttgagacataaaacaaaagctaatgctttggttgttcaactaaaggaaggaacttctatggccagaattggataaattgctccgtgttgaagatgataaatcggcagcaccaactccctacacagctgctattcctgaatatagagttgtattggtcaagccagaggaagccatgcatatcaacaaatcctttagtctcagtaatggtcatgctgtatatgacattcagcatccttgcaggtatgagattatttctttaatttgactgcactgggacactgggtgtggtctgaacaaattctgatcatgctttccttgcagagcaaatgtggctgtgcggcgggagcttcacacgccggcttcttaccggtcctgcattcatttagagtttgatatttcagggactggtcttacgtaagtatctgaatttgttactttccaaatttagtagttggttgacaaaattgcaggcacggttttcttactggtgtttagactgctgatgacccccattttcttaacagatatgagactggagatcatgttggtgtatatgcagaaaactgcacagagactgtagaggaggtagaaaatctgttaggttattcaccagataccttattctcaattcatgctgaccaagaggatggcactccactttttgggggttctttgccacctcctttcccgtccccctgtactgtggggactgcacttgccagatatgctgaccttctgagttttcctaagaaggtgaacttttgcagatctatcttgttacattctatatgcattttttctggatatttgtattgatgttaatattttttaatttgttgatgcagagtgctttaattgctttggcttcccatgcatctgatcccaaagatgctgagaggctaagacatctagcatctcctgctggaaaggttggtttttaatataagtttatgcttttggatgttagttttggcttcacatgagcttcatttggcagaaggagtattctcaatggatagtttcaagtcaacggagtctcttggaagttatgacagagttcccatcagcaaagcctccacttggtgtcttctttgcagccattgctcctcgactgcagccgagatactactcgatatcttcctcaccgaggtaccttggtcaggaataatacccttctaacctgagcaaattgacctatctatttaaaaccattcacattgctgcaggatgactccaacaagaattcatgtaacatgtgcgctagtgtatgggcaaacccctactggaaggatccataaaggagtttgttctacttggatgaaggtaagcccttgttctatcatagtgaaagggcactctgtttctatattatagtcactgtgctttctgcatttcttttggatgattggtagataattgaatatgaccgtcatagctcgctttgatgcttatatatcaagatccagtcttcattacatgtgtccaactttaactggttaagtgaacctgtttcttacccactttaaaaactccacgtgaatcataatttctcaagtttcttgatgtatggacaaagtgtcaggttaacagttctcatgatgaacttaccgtgatggccttgccaataacactaaacaactcattctattcagtaactcaaccttgtatcactccctgaaaattctatagttatatagtaactccatccgtttcatattataagtcgttttgacttttttcttagtcaaactttttttaagtttgaccaattttataagaaaatatagcaacatttccaacaagaaaaacatattatcaaaatatattcaatgttacatttgatgaaactaatttggtgttgtatatgttgctaattttttctataaacttagttaaacctaaagaagttagtttgactagaaaaaaaagtcaaagtgacttgtaatatgaaacggagggagtgcatctttccctcagcaatatgaaagacttcgaaaagttcttgatacatatattctgtagttgtcgatttgtttcatatataatgagagtttatattttcgaaggagtacactttgaaaacaatggtcatacatttggtcaagcataaaaactttgtttgaagtatgtgatggtcgtgctgaccagtaaacattttaatctgatgattgtgtatgcagaactcgattcccttggaagagagccaagaatgtagctgggctccaatttttgttaggcagtcaaacttcaaactgcctactgatcctactgtgcctattataatgataggtcctggaactggtcttgcaccttttaggggcttcttacaggtttgtttttcctccccctttcctcaaatattgactcttataattcaattgattatattatgcatttggcactggcaggaaagattagctctaaaagagactggtgtggaactaggccatgccgtcctattctttgggtgcagaaatcgaaagatggtatgacatacattcctactttattcatattcatatgcagtttgtacttagaaaactttacaatatacgaaatctgttggtcataggtattcttataaatcttagtaattaaaaatatcaacacatctgccattgatgttgcacaatgtggttatgcacatatgtgctttgtcagagctctccttgtctttcagaaaacttttctgcattgtagtttgagtgtaggagagtatcttattggtgattggcaattagaaaacttcctagcctcttaaataactcccctcaccagtattttctctgttcaggacttcatatatgaggatgagctcaacaattttgttgagaccggtgcgctgtctgaattgattgtagccttttctcgtgagggtccttcaaaggagtatgttcagcacaaaatggcagagaaggtacatgaaatgatcctttttgtttaatataaggtgtagtgttttatttccctttttcaccattgctttgtaatattcccaggctcccgagatttggagcatcatttctcagggtggttatatttatgtctgtggtgatgcaaagggcatggcaagagatgtacaccgcacactacacaccattgtgcaggaacaggtattgtttgggtatatcattacctttggtacctgttagattcagttaattcttagtgggaggatgcagtggtgctctacctctagaaagtttgcactttcttgattgaggtcaaaacaaatccagaactctgtcccttagtatttatcacctagcctagcctctttctaagcaggcattatgagtaattatgtgaagtgccatgaaagctctttagagtttaacagtagctttgctttcatctccactttgctgaatgttaccttgaattttcagggttctttggacaactcaaacacagaaagctatgtaaagagcttgcagatggaagggagatacttgagagatgtctggtgacaagccatcctcgcaaatccacccttgtgtctctgccaaaatgtaatacttccataaatacaacagtatgcgttctgtagggagttagtgaaacacctaaattacattggagaaaatagtacctgattgcaggctgtggtggtaggaattatacatgggctgtagtatttatcagatctgtatgaatcatagtaagattgtttaaacatatatatatatatatatttatatatatattcatattcatatataggactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0558900, RefSeq:Os09g0558900