Difference between revisions of "Os05g0582100"
(Created page with "{{JaponicaGene|
GeneName = Os05g0582100|
Description = Cas1p-like family protein|
Version = NM_001062971.2 GI:297604973 GeneID:4339732|
Length = 4657 bp|
Definition = Ory...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0582100| | GeneName = Os05g0582100| | ||
Revision as of 20:15, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0582100 |
|---|---|
| Description |
Cas1p-like family protein |
| Version |
NM_001062971.2 GI:297604973 GeneID:4339732 |
| Length |
4657 bp |
| Definition |
Oryza sativa Japonica Group Os05g0582100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29041810..29046466 |
| Sequence Coding Region |
29042320..29042478,29042559..29042655,29043122..29043178,29043259..29043321,29043439..29043527 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:29041810..29046466 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:29041810..29046466 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gtttcgtttttgctgggtcttttccctgtcctcattggatggatctacgccgaaatcttagaatacaggaaatctttgttgtatgggaaagttcactcggatgctaatttggagaatgagactatgaaggaagatgataaggctgtattacttgaaggagggcagtcaaaatcgccatctacaaagctccgaaacatgtctacaaaagcaaatttaatacggtttataacaatggacgagtcttttctgcttgaaaaccgtgctgtgctaagagcaatggccgaagtgggcattattctggtctacttttacatttgtgaccggacaaatatatttccagaaactaagaagagctacaaccgcgacctgtttctgtttctgtacattcttcttatcatagcatcggcacttacttcacttaagaagcacaatgaaaaatcagctttcactggaaagtcaatactctatcttaatcgtcaccaaactgaggaatggaaagggtggatgcaggtcttgtttctgatgtaccactatttcgctgccacagaaatatacaatgcaattcgggtgttcattgctgcctatgtctggatgactggattcgggaatttctcatattattatatcaagaaagattttagcattgcaagatttgcacagatgatgtggaggctaaatttctttgtggccttctgttgcattgtccttgacaatgattacatgctgtattatatatgtccaatgcacacactttttactctgatggtatacggatcacttggtctgttcaacaagtacaatgagaaaccatctgtcatggctattaagattgcttgctgcttcttgactgtcattttgatatgggaaattcctggggtatttgaatttttatgggccccctttacatttcttctaggatataaggatccagagccttccaaggcaaacttacccctgctacatgagtggcatttccgatctggccttgatcgatacatatggattattggaatgatctatgcttacttccaccctaatgttgaacgttggatggagaagttggaggaatctgagactaaggttagactgtttatcaagggagccattgtcactctttctttgacggctggttacctatggtatgaatatatctacaggctagacaaaattacatacaacaagtaccatccctacacgtcatggattcctatcactgtttatatctgcctacgcaactgcacccagcagttgaggagtgcctccttggctcttttcgcctggcttggcaagatcacactagagacatacatttcccagattcacatttggctcaggtctagcacgccaaatgggcagccaaaatggctcctatcttttgtaccagattatccattgcttaacttcatgcttactacagcaatctatcttcttctatcataccgggtgtttgagatcacaggtgtactgaagggagcttttattcccagtagagacaacaatcggctatatcaaaattttattgcagggattgccatatctgcatgcctgtatttctgctcacttattcttgtgaaaattactattgtatag</cdnaseq> |
| Protein Sequence |
<aaseq>VSFLLGLFPVLIGWIYAEILEYRKSLLYGKVHSDANLENETMKE DDKAVLLEGGQSKSPSTKLRNMSTKANLIRFITMDESFLLENRAVLRAMAEVGIILVY FYICDRTNIFPETKKSYNRDLFLFLYILLIIASALTSLKKHNEKSAFTGKSILYLNRH QTEEWKGWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSIARF AQMMWRLNFFVAFCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEKPSVMAIK IACCFLTVILIWEIPGVFEFLWAPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIW IIGMIYAYFHPNVERWMEKLEESETKVRLFIKGAIVTLSLTAGYLWYEYIYRLDKITY NKYHPYTSWIPITVYICLRNCTQQLRSASLALFAWLGKITLETYISQIHIWLRSSTPN GQPKWLLSFVPDYPLLNFMLTTAIYLLLSYRVFEITGVLKGAFIPSRDNNRLYQNFIA GIAISACLYFCSLILVKITIV</aaseq> |
| Gene Sequence |
<dnaseqindica>3989..4147#3812..3908#3289..3345#3146..3208#2940..3028#2696..2782#2399..2520#2061..2316#1817..1966#1283..1441#669..741#537..593#318..446#1..92#gtttcgtttttgctgggtcttttccctgtcctcattggatggatctacgccgaaatcttagaatacaggaaatctttgttgtatgggaaagtgtaagatttctttctgaatactataattttatttagctttaggaacttagagttggttgttgatatgcatatattcgaagtcaactgcccaccattgctcctaataattgaatcatgtaaccagagttttcgtgatgaaactggcatgacatatcttacttcatgcaaatgttgaaaaatccatggtctaatctcctcctatccgggcattcttttcatctgcagtcactcggatgctaatttggagaatgagactatgaaggaagatgataaggctgtattacttgaaggagggcagtcaaaatcgccatctacaaagctccgaaacatgtctacaaaagcaaatttaatacggtactgtttgaatgcataatgcacagtttttaggattttagcaaattctattgcagttaagtgatgtctcgatgtggctgtgagttgcaggtttataacaatggacgagtcttttctgcttgaaaaccgtgctgtgctaagagcaatgtaagactattcagagctaattttttccactctagaatttcgtgctaagacgcacaccctttaactttcttgcagggccgaagtgggcattattctggtctacttttacatttgtgaccggacaaatatatttccagaaactaagaaggtaaccatattgctccttttcttactcttgacactctcaatgatgtactatatggagtagatgtaaactgcaacatgtagcttttggctaaattgtaactgtagcttgttccacatccctggggatagttcttactgttttttataatctaccatatcttgtttcttaattgttcttcctgcaattaattcttgcaagttatagggacttttctgccttagtttcagtgtaggcttatctctaaaacaagatagagaccgtgagttagggctaagtaggtgacatatctgttccttatctagttatctgactggcttaagctttctgccatctcatacagacagaactcatagccaatggatgtgagcatgtggcttgtagaaaggggataggttataagtcggggatcggggtcttgttggccaacttttctcgttgatctaataagctagaatttagggatttacctcaattaggccaaaaaagcattatatgatgttcatttctgcagtatatagtaatctttgtgttgttttgacagagctacaaccgcgacctgtttctgtttctgtacattcttcttatcatagcatcggcacttacttcacttaagaagcacaatgaaaaatcagctttcactggaaagtcaatactctatcttaatcgtcaccaaactgaggaatggaaagggtggatgcaggttagtgactttacttcactgcttctgttcttttagtaaatgtgatttcagttatttctgtactgagtttttatagcgcatggttatcatccttcctgttttgtacacgcaagcaatgtactttgatgtttgttcaccaggcattgagttagaaaaaaaaactctgggtattcttatccaaatcgtgctctcagttttatgtcatgcactgtttttatttggacaagccctatgttacagccatttcatgcctcagaaatttccaactactgtcgtagcacttttatattctttctcgctgttgtattatgcaatccttttagtacttgtatgttggctttaagtgtgctataattattttatctgcctttccaggtcttgtttctgatgtaccactatttcgctgccacagaaatatacaatgcaattcgggtgttcattgctgcctatgtctggatgactggattcgggaatttctcatattattatatcaagaaagattttagcattgcaagatttgcacaggtttccatcctagcccaattatccaatgttgtttcttaccccttgatttgttgtaaccatcttagaaatactaaagaccatcttttaaatgcagatgatgtggaggctaaatttctttgtggccttctgttgcattgtccttgacaatgattacatgctgtattatatatgtccaatgcacacactttttactctgatggtatacggatcacttggtctgttcaacaagtacaatgagaaaccatctgtcatggctattaagattgcttgctgcttcttgactgtcattttgatatgggaaattcctggggtatttgaatttttatgggccccctttacatttcttctaggtgagttatgcatgttttctgtcttagcattattctcattaaccatggataggattttacaccattttcctttcatgtacaggatataaggatccagagccttccaaggcaaacttacccctgctacatgagtggcatttccgatctggccttgatcgatacatatggattattggaatgatctatgcttacttccaccctaatgtaagtaattcggttatggatccacatttcctccctttggaactgcatgagtgagcagtacatataccgtgttcctttcatacatttcttcctagggagttctctcttattttaagaatatgttccttgtttatactatatattaatgtagcatggaatccgctatctgaaataggttgaacgttggatggagaagttggaggaatctgagactaaggttagactgtttatcaagggagccattgtcactctttctttgacggtaagttgcatccatcttttaccaatgcacagactttctatattgtcaagatgacatacttgtttgctttaccaactagatttgcttttgttttaaaccatgatgctgtattgatttcaaatgctgtactaactaggacttctgttcctcattttaggctggttacctatggtatgaatatatctacaggctagacaaaattacatacaacaagtaccatccctacacgtcatggattcctatcacgtacgtataaaaaacactaccatgattatatggcatgtggtaaattgtttctttaattgaatagacactttcagcaaaaagaaaacattgaattgacacaacaccgttgttttacagtgtttatatctgcctacgcaactgcacccagcagttgaggagtgcctccttggctcttttcgcgtaagcacctaatataatgatgtttctttttctttattggctttattttttactaagattttaacctgttttttcaatagctggcttggcaagatcacactagagacatacatttcccagattcacatttggctcaggtatggtatcaatttttttcagcatgtgttactgttgttttaattacttaatgcatgaccgttcaaaaaaaaaatttacgcatgaccagtccagtaatcagctctgcatctgatgtcaaatgtatgaacagaactacgaatgaaaataaacaagcaatttgacgggttgtgtattcagctgcgttgacttaacctacttggtgtaacacctacagctatcataagaactatgatagatttagatttattgatgctaacattgaaaatatattttctactttcaaagagaattcggaattcaaattcaagaaaaacacaagaaatgaagatttctggattagaatacatgtcaaaatttctttctaatatgaaatacgtctaggatttgttggcattgtccactctattgtgtccagtgtttttaattttaagaactggaaccacggtgctgattcttattttacaggtctagcacgccaaatgggcagccaaaatggctcctatcttttgtaccagattatccattgcttaacttcatgcttactacagcaatctatcttcttgtaagtgaacctgcccagggtgcattttcattcaaaaattataatcatcgaagttattaattccatgatgtatactgcagctatcataccgggtgtttgagatcacaggtgtactgaagggagcttttattcccagtagagacaacaatcggctatatcaaaattttattgcagggattgccatatctgcatgcctgtatttctgctcacttattcttgtgaaaattactattgtataggtaaacagctggaacctactatagatacttacggctttcacatagtctgtctctatatatcccagtttcctcagtattggttccacgtgattacaggtagaattgccaagtaaatgaccttgatagaaggtcgttcctgaaaattgtgtgcttggtatctggtggtaagatattcagctcaggcctcaattccattttgcatttggaggtaaagatacagttcccatgaaggacctgccgatcttctagttgggaattgaattgccagaggatgtaggtatagaagtcaaattttgatttatcatttcccccatttaaaacactgtacacagttagcgaagttgtgcattctttgggagttgtagatgctttcctaagttgatacaacagtgtaagaatttcctcccctcaaagcactgtaacatgtggtgtactatacagaatgatactacaaggaagggtttcccttttgtaaaacgaaatataaagggcaagccccaatctttcttt</dnaseqindica> |
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