Difference between revisions of "Os05g0586600"

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(Created page with "{{JaponicaGene| GeneName = Os05g0586600| Description = Plastid sigma factor SIG5| Version = NM_001062998.1 GI:115465726 GeneID:4339759| Length = 1962 bp| Definition = Ory...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0586600|
 
GeneName = Os05g0586600|

Revision as of 20:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0586600

Description

Plastid sigma factor SIG5

Version

NM_001062998.1 GI:115465726 GeneID:4339759

Length

1962 bp

Definition

Oryza sativa Japonica Group Os05g0586600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29306747..29308708

Sequence Coding Region

29306747..29307118,29307223..29307510,29307612..29307758,29307844..29308080,29308166..29308429
,29308514..29308708

Expression

GEO Profiles:Os05g0586600

Genome Context

<gbrowseImage1> name=NC_008398:29306747..29308708 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29306747..29308708 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccactgtgacgacgccgagccggccggtatccgccgggtgccaccggcgctcgccgcggcggtcagcgcccgtcgtgctctccctcggcggcgggccgcggcggcgcacgccgtcgtccaccagctgctcggcgctcgcgtcgccggcgaagcagggcacggccaagctccctccgccgcagccgacggcgtcgaggaccgcggcggccgacgcggagcgggagcgggagcggacggactacaacgaggtggccgccgcgctggagagcatctacaagctgagccccgccgtggtcgaggagaaggacgccgacgaggaggacgagaagagcaaacagaccaagcggaagagaaaaggcagagtggggaggagccggaacgcgacggtgacggtgaggagcagccggaggaggaggcggggacagaggatggacctggggaagagggtggagatgaggaggagggaggaagaagagggcggcggcggcgccggcaaggtggaagacgaggagcgggggttcgaggagatgctgctccgggagcacgccgtgtccaccgacatgggcagcctcgactggaagcggatgaagatccctcccgtgctcacctccgcccagagcatccgcctcttcaggatcatgcagcccatgaaggcgatcatggaaatgaaggagaacctggagaacgaagtgcagagcgagccaaacgacgcacagctcgccgaggccatgaacatgtccgttcttcagatgaggcgccatctcgaggtcggccgagctgccaggaacaagctcatcaagcataatctccggctggtgctgtacacgatcaacaagtactacccggacatgtccaacgacgagaggttcgacgacatctgccaggcgggcgccaacggcttgatcacggcgatcgaccggttcgagcccaagcgcggcttccgcatctccacctacgccctcttctggatccgccactccatcgtccgcgccatcaccctctccaacttcacccgcttccccttcgccatggaatccgagaggcaggagatccacagggctcgggaggagctggcgttcgagctggggagggcgccgacggaggaggaggtgatgaagaaggtggggctgtctccggcgaggtaccgcgacgtggtgcggatgacgaggcccacctactccctccacgcgcgtaacagggtcacccaggaggagctcatcaacgaggtcaccgacgacgacgccatcggcgtcgacaccagcagccacaacaccctcctccgcctcgccatcgacgacctcctggattcgctgaagcccaaggagagcgtggtgatccggcagaggttcgggctggacgggagggggaagcggacgctgagcgagatcgccggaaacctcaacatctcgagggagatggtgcgcaagtacgagctcaaggcgctcatgaagctcaagcaccccacgcgagtggaatacctgcgcagatacatgtga</cdnaseq>

Protein Sequence

<aaseq>MASTVTTPSRPVSAGCHRRSPRRSAPVVLSLGGGPRRRTPSSTS CSALASPAKQGTAKLPPPQPTASRTAAADAERERERTDYNEVAAALESIYKLSPAVVE EKDADEEDEKSKQTKRKRKGRVGRSRNATVTVRSSRRRRRGQRMDLGKRVEMRRREEE EGGGGAGKVEDEERGFEEMLLREHAVSTDMGSLDWKRMKIPPVLTSAQSIRLFRIMQP MKAIMEMKENLENEVQSEPNDAQLAEAMNMSVLQMRRHLEVGRAARNKLIKHNLRLVL YTINKYYPDMSNDERFDDICQAGANGLITAIDRFEPKRGFRISTYALFWIRHSIVRAI TLSNFTRFPFAMESERQEIHRAREELAFELGRAPTEEEVMKKVGLSPARYRDVVRMTR PTYSLHARNRVTQEELINEVTDDDAIGVDTSSHNTLLRLAIDDLLDSLKPKESVVIRQ RFGLDGRGKRTLSEIAGNLNISREMVRKYELKALMKLKHPTRVEYLRRYM</aaseq>

Gene Sequence

<dnaseqindica>1..372#477..764#866..1012#1098..1334#1420..1683#1768..1962#atggcgtccactgtgacgacgccgagccggccggtatccgccgggtgccaccggcgctcgccgcggcggtcagcgcccgtcgtgctctccctcggcggcgggccgcggcggcgcacgccgtcgtccaccagctgctcggcgctcgcgtcgccggcgaagcagggcacggccaagctccctccgccgcagccgacggcgtcgaggaccgcggcggccgacgcggagcgggagcgggagcggacggactacaacgaggtggccgccgcgctggagagcatctacaagctgagccccgccgtggtcgaggagaaggacgccgacgaggaggacgagaagagcaaacagaccaagcggaagagaaaaggcagagtggtgagcatcctagctagtcttcttctaaatcaaatcgaaagaatggattctcgcttgctagctagatcgatcttgatcgtgcatgcgtatgggtgtcatcgaaggggaggagccggaacgcgacggtgacggtgaggagcagccggaggaggaggcggggacagaggatggacctggggaagagggtggagatgaggaggagggaggaagaagagggcggcggcggcgccggcaaggtggaagacgaggagcgggggttcgaggagatgctgctccgggagcacgccgtgtccaccgacatgggcagcctcgactggaagcggatgaagatccctcccgtgctcacctccgcccagagcatccgcctcttcaggatcatgcagcccatgaaggtaattgccaattgccttgatgattctaactgttttagctagtttgattagttggagaaattgactaattaggatccggttgatggatcaacatatttcaggcgatcatggaaatgaaggagaacctggagaacgaagtgcagagcgagccaaacgacgcacagctcgccgaggccatgaacatgtccgttcttcagatgaggcgccatctcgaggtcggccgagctgccaggaacaagctcatcaaggtactcagttactcactaaactagtgtcactactgtcacgtacgcaatcagtagagactgatcatgaataatataataatggcagcataatctccggctggtgctgtacacgatcaacaagtactacccggacatgtccaacgacgagaggttcgacgacatctgccaggcgggcgccaacggcttgatcacggcgatcgaccggttcgagcccaagcgcggcttccgcatctccacctacgccctcttctggatccgccactccatcgtccgcgccatcaccctctccaacttcacccgcttccccttcgccatggaatccgtacgtactcctcctccttcttcttcttcagctcgatctcgtcttgtccaatcttcagattggctgattgattgattgggtgcaggagaggcaggagatccacagggctcgggaggagctggcgttcgagctggggagggcgccgacggaggaggaggtgatgaagaaggtggggctgtctccggcgaggtaccgcgacgtggtgcggatgacgaggcccacctactccctccacgcgcgtaacagggtcacccaggaggagctcatcaacgaggtcaccgacgacgacgccatcggcgtcgacaccagcagccacaacaccctcctccgcctcgccatcgacgacctcgtaagttgtaaatgaacagaacaattctgttcttgaatttcctttgaaatgtgattcgaatcgaatgtatgtataaatgtgcagctggattcgctgaagcccaaggagagcgtggtgatccggcagaggttcgggctggacgggagggggaagcggacgctgagcgagatcgccggaaacctcaacatctcgagggagatggtgcgcaagtacgagctcaaggcgctcatgaagctcaagcaccccacgcgagtggaatacctgcgcagatacatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0586600, RefSeq:Os05g0586600