Difference between revisions of "Os05g0589600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0589600| Description = Similar to Nuclear RNA binding protein B (Fragment)| Version = NM_001063018.1 GI:115465766 GeneID:4339782| Length = ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0589600|
 
GeneName = Os05g0589600|

Revision as of 20:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0589600

Description

Similar to Nuclear RNA binding protein B (Fragment)

Version

NM_001063018.1 GI:115465766 GeneID:4339782

Length

3216 bp

Definition

Oryza sativa Japonica Group Os05g0589600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29437558..29440773

Sequence Coding Region

29437780..29437957,29438111..29438522,29438628..29438772,29439849..29440007,29440088..29440147
,29440254..29440451

Expression

GEO Profiles:Os05g0589600

Genome Context

<gbrowseImage1> name=NC_008398:29437558..29440773 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29437558..29440773 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtccaagaaccagttcgatctcctcgtcgacgtcgacaacgatgacccctcccacctcatcgccgccgccgagaagaaggctgcggcggcggccgcgtcgcccaagctcgcctcatcgccggcgcccgctccggccaagctgcccaccaagcccgcgccacccgcgcaagccgtaagggaagcgaggaactacggtgctccacgcgatggggctggccgtggtggcccagggcgtggaagaggcggcggccgaggaggcaggggcggtccgaggcgagatttcggtgagggtgatgccaacggctttgagggtggctatggtggtggtggtgggtttggtgatggtggattggctcgcggtgaagacggtgaggggagacaggcagagaggggccgtgggccacgccagccctaccgtggaggtggtcgccgcggtggctatagtgatgggcagagtggagacgactatggacgtccgcgcagggcgtatgagcgccacagcggcactggccgtggctatgagttgaagcgtgaggggtctggccgcggcaattggggaactgtcaccgatgaaggccttgcacaggaagttgcggaggctgttaacactgaggaggctcctgcaactgcagaggatgagaagaaacctgaagatgtgccacagtctgaggtcgacaaggacaaggagagtccagagaatgaagaagaagaaaaagaacctgaggataaggagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagctttgcttgcactgaaggctgaggagaggaaagttgaagtcgacaaggagttgcaggccatgcaacagctctctgtcaaaaaggctaatgaggaagtgtttatcaagctgggctctgacaaggacttgaaaaagaaagaaaaggatgaaaaggatgaacgtaccaagaagtccctgagcatcaatgaattcttgaagccggctgaaggagagaggtactacaaccctggccgtggtcgtggccgtggcaggggtcgtggtgatcgtgggggtttctatggtggttacaatggcaacggtggtcgcagacaggctgccgctccggtgatcgaagatcaggcccagttcccctcgctaggtgggaaatga</cdnaseq>

Protein Sequence

<aaseq>MGSKNQFDLLVDVDNDDPSHLIAAAEKKAAAAAASPKLASSPAP APAKLPTKPAPPAQAVREARNYGAPRDGAGRGGPGRGRGGGRGGRGGPRRDFGEGDAN GFEGGYGGGGGFGDGGLARGEDGEGRQAERGRGPRQPYRGGGRRGGYSDGQSGDDYGR PRRAYERHSGTGRGYELKREGSGRGNWGTVTDEGLAQEVAEAVNTEEAPATAEDEKKP EDVPQSEVDKDKESPENEEEEKEPEDKEMTLEEYEKVLEEKRKALLALKAEERKVEVD KELQAMQQLSVKKANEEVFIKLGSDKDLKKKEKDEKDERTKKSLSINEFLKPAEGERY YNPGRGRGRGRGRGDRGGFYGGYNGNGGRRQAAAPVIEDQAQFPSLGGK</aaseq>

Gene Sequence

<dnaseqindica>223..400#554..965#1071..1215#2292..2450#2531..2590#2697..2894#agtgtatgaccgtactgtatagcagagcagcagcctccgggcagacgagagccaaaggctttgctcttggcggctagggttttgtgtgccaaaccctaatccccttccttgcatcaatctcatggcggcgatttcgtcggggatggtggcttgaaaggtctgtgtgttcttgtttgggattgaggaatagagaggagctaagtggtgtggcggcgcggagaaatggggtccaagaaccagttcgatctcctcgtcgacgtcgacaacgatgacccctcccacctcatcgccgccgccgagaagaaggctgcggcggcggccgcgtcgcccaagctcgcctcatcgccggcgcccgctccggccaagctgcccaccaagcccgcgccacccgcgcaagccggtgagtatgacacgcttctcacttctcagtgctctctattcgattcgattaccgtacgcatattgatggagaaattaccggattgttggatccatggctgtttttccgttaggcgcaaagatttgatttgattttttatgtatatatctacagtaagggaagcgaggaactacggtgctccacgcgatggggctggccgtggtggcccagggcgtggaagaggcggcggccgaggaggcaggggcggtccgaggcgagatttcggtgagggtgatgccaacggctttgagggtggctatggtggtggtggtgggtttggtgatggtggattggctcgcggtgaagacggtgaggggagacaggcagagaggggccgtgggccacgccagccctaccgtggaggtggtcgccgcggtggctatagtgatgggcagagtggagacgactatggacgtccgcgcagggcgtatgagcgccacagcggcactggccgtggctatgagttgaagcgtgaggggtctggccgcggcaattggggaactgtcaccgatgaaggccttgcacagttaagattggtcctttgcaatttggtttgcgattgttggcttattttgtagatgtgattgattgatccgacgattgaatataactcttctatatggttgattagggaagttgcggaggctgttaacactgaggaggctcctgcaactgcagaggatgagaagaaacctgaagatgtgccacagtctgaggtcgacaaggacaaggagagtccagagaatgaagaagaagaaaaagaacctgaggataaggtatatttctgatctgtgctttaataccttaatgcatgtgtgcacatttggtactgtttaggaggtgatgataactctttctgggcatagggcatggtaaacatacagttttgggtattacattctggtgcctttgaatggtcaaacatgtggatgcattttaagcacaacgggtacatatagttttggtttttgatttcgtcagaaactagctacaggtcattcatttagtgtgggaaaacatgtcatctgtactattctaagcaatgtagttcaatcattcaactggtttacatgtgggttaaatttgcctttttgagaactgcattatgttctccagtttttgcaggctcttcttgctttcagttttgtgcttttgctcatttctagccaatgcaatataattatgtcagaatgtatcgcgttactgcttagttaatttgcttttgatactcatgttacaaaatagccaggacttcggtaagatgatgtttaagttgactgatgggaaggttttatatattctgtgagtagtctgccacactcaaaactggtggatgacttgtgcccgctttaaatacagaaatataaagtttgcaattttgcttgcatcagttggaactagaagctgctgtatatattgattttctgcataattcaatatcattacctgaagtttctgttgtttaattttttttccttctgtattgaatgctatctcctatctgctatgtagtagatcttttgggtatccataatattatttgggcctttcccgttcttttctccatggtgaacgttcagctatggcaccttccatttgttgatcaaattctcttggtcattcaggcgttcttgtgttggttctagtacatgtttggatattcctattatccctactgtcctaacggttgcctgttatatagcatgtgtttgctcattctggtgtttctactgtctcatttctctgcctattaaagggttttctaagtaattgcttgaagttagcactccgtgcgattcaagtagcaattcgtttgatagtgaaataacaattttctaccaccatttcacaggagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagctttgcttgcactgaaggctgaggagaggaaagttgaagtcgacaaggagttgcaggccatgcaacagctctctgtcaaaaaggctaatgaggaagtgtttatcaagctggtaagttgtatgcttggtgttatgtcctctgaacatgtttcagtacatgtctatttccgctcaacttttattattatcagggctctgacaaggacttgaaaaagaaagaaaaggatgaaaaggatgaacgtaccaagaaggtatttcatttttttggctcattaatcataagcctacactggctgttctggctcacaatattgacttgtctttgtccttctcctgtttggtccattcttggtgaagtccctgagcatcaatgaattcttgaagccggctgaaggagagaggtactacaaccctggccgtggtcgtggccgtggcaggggtcgtggtgatcgtgggggtttctatggtggttacaatggcaacggtggtcgcagacaggctgccgctccggtgatcgaagatcaggcccagttcccctcgctaggtgggaaatgaaacgaacgctcggatctagcggctcggttgtcttgttggttcacctgaaaactgtgtcgtcgtcgagttgagtactgtgttgttatgtcgcccctcccagataggagtgttgtgtttatcgcctgtctgtatccccgtgcatatccgaggtgcacccatccatcaccattgctgtgtttgtcagacatagtagctcatgtgctgcttctattttccgacaggagtggacagtgtatgccatgtttctgatgagtagtcgtgtgtgcgttggttcagagattttgctcagctgagaatggatcccatggtttattaaagaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0589600, RefSeq:Os05g0589600