Difference between revisions of "Os05g0596600"
(Created page with "{{JaponicaGene|
GeneName = Os05g0596600|
Description = Similar to SMC5 protein|
Version = NM_001063056.1 GI:115465842 GeneID:4339821|
Length = 12526 bp|
Definition = Oryz...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0596600| | GeneName = Os05g0596600| | ||
Revision as of 20:16, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0596600 |
|---|---|
| Description |
Similar to SMC5 protein |
| Version |
NM_001063056.1 GI:115465842 GeneID:4339821 |
| Length |
12526 bp |
| Definition |
Oryza sativa Japonica Group Os05g0596600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29809830..29822355 |
| Sequence Coding Region |
29810154..29810206,29810627..29810730,29810813..29810884,29810993..29811081,29811156..29811204 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:29809830..29822355 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:29809830..29822355 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtaaatgtccaggataaggttcacgcttcgtacttggaaggccatgtcgcaagctatatatggaagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtggtccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttcccgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaaggaagagattacagacacgatgatgtttgagaagaagaggcaagaagaaacacggagacgtgttgatattaaaagaagaatgttggagactatatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtgcttcctcctgacgcccaagttgctgcctgatttggaatatagtgatgcatgcagcatcctaaatatcatgaatggcccatggattgagaagccagctaaagcctggagcaccggtgattgctggagaacagtaatgagcgtgagtgggcactga</cdnaseq> |
| Protein Sequence |
<aaseq>MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIE LCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVK RGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQV NNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVK QKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEK EKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKEL QLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLT EEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAE KINEAYNWVQDNRHMFRAEVYGPVLLEVNVQDKVHASYLEGHVASYIWKSFITQDASD RDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVL ISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNP SRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEI TDTMMFEKKRQEETRRRVDIKRRMLETIYKEEDMESSKRKFVDQAAKLNDQRYELVLK LKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQ EHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNV LLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNF QEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVS LQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSD ACSILNIMNGPWIEKPAKAWSTGDCWRTVMSVSGH</aaseq> |
| Gene Sequence |
<dnaseqindica>12150..12202#11626..11729#11472..11543#11275..11363#11152..11200#10078..10132#9889..9988#9714..9791#7647..7763#6630..6733#5882..5954#5470..5547#5236..5360#5110..5173#4867..5012#4606..4771#4403..4501#3827..3955#3376..3441#3147..3291#2951..3072#2613..2768#2422..2533#1415..1560#1199..1303#911..1060#675..748#396..549#43..309#aaccaacctactggaggaggagtactggagtagagagcgagcatggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccgtactctctcttctcctctcctctcctctcctctcctgtacgattgattccatgctactctaatactacataccaatgcactgcagattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggtacatgctctccttactcctcattacacaaaccgatgcttatttctttcactatcctttttattcagcaaatggattggatttgaggcgatgattcctgcatcactaacatttgtttcctgcaggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccaggtgcacctccagtccattttagattcagctcttttacatgatccattccttatcattttcctttgcatgccatgatattgtaatccagaggagccactcacttacccttttatcgtgaatctattcctgatttctgttgcttttgtgctcaactctgttcagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggtaaagctgaatcattcactattcactctttccttatgcttgcttggaccagtgaaagctattcccatttccttgcatatcttgtttagatgtcaaccctatggtatcgattcacgataaatttatctcgtttgttaggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggtttgcagtttcatttttttggtttggtaaattcccccttttgggttatgacatgaagggcataaaaagtattttagtgataattataacatcttgttggttttgtcttaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgagtatgtttcatgctcaactggcttcaatttttcattcatttataaactcatctctagaggtatctttgaactacgtgggctaggcatttgttctgatgttcttcgttatgaagatttcctttcaaagcccttcaatctgaatggatacattcacgtacagccaagaggacagttctattaacttccaaccttgattcagtagtacttctatgttttgattgacacacacttccctttaatttttcatatcaatttcctttttgtacttgagtaacactaattaaaacaagctagaacttgatttatacagaatatgttatcactatcacggttaatatgtaagcattttgtgaatccgatcacttcatataaaatgacaggattccttggtcatgcttgcaaccacatgctagtataagtttaactttatgttcctcatctccccttaacttttttcatattcaagtaacttgtgtaatcatattgtttggattcaacacaaatcgaatcccctctatttaatcattgtacattatcacattgtcaccttaaatgtaaaagggaaaaaagaagaaggaagaattagtatcaacctatactgggataggaatgctctctgattactcaagagagcaacagataactaaaaagagggagggagggaggcagggagaggtcaggatacatttttttgaattaccattggatatagtgtactgccagctttttgacattcttttcccagttctaaggaaaagtttctcttcacactttacctttatgtgactggcttaaatatcaaagtttgaagctttaagttctaatagaatacccccctcttgttactttccctatttgtagagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactggtataaactcttctttacctaaatgatatttctagtactatttcactgctgcaagtcattaacacgtcttctctatcagaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatggttggtttattcaccttattttccctagtttttgctgtcatttattttagataacgagcttttgctgtcatacatctttttttttgtttgcaattttgcatatgtagcatacaagtattgtgtacggtttatctgctctagtaattatttaagcccgttaataattttatgtttcttcacagattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggtactcgttttgtctattaatttctactttgtccaagacttgggtacctactagctagttattatttatcacaggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtttgtttacttgcatgttcaccaactattgtctgctttgctgatcatacaagtaatagtacatcttctttgtactgctgtcaggtaaatgtccaggataaggttcacgcttcgtacttggaaggccatgtcgcaagctatatatggaaggtatagatactacgatagcaccttatgttcctctctgctaattagtgtgatgcttatgttttactttattttagcatttccatgaaacaatggaaagccaagaggaacacacttaccagtggctgctggttctgttgtgcactgcacattgtgttttgtttttccttcacatagtcaatgtgctgttgcaaatttatcctccagttgctggacatggttagtgtccagtaggatggcatctcattaaaccatttctagacaaggtcccttatttattgtcatcattgacttggaaaccataaaacactaccatgccatcttattctttcctcctatggaagatactgcatctgtaattaactgccattttgcttttatgtggcagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggaggtcagcaggcattgtccaagcatttaatctaaaaaaaagcatttggcatttgggaacatagatatttttcttactccttttttggcctaagtttcacattaattgcaagttgtaagttctacattcacattaattgcacatcatttcatttcattaagaaggagaaaaacagttacaaaaaaaaacagaagttctacattgacattattccctcatcctattttctaacttgttgtgtatgaacacccccacacaaatcgtcttcttttttttggcctaagcacatattctcttgttttgtctaagcactcaatgtaggggcaccagagtcattctcttctggtgacttcatcaatcttaaagctttctcagtctttgttccctcttaaaaacatgaaagaatggtaagagcaataatttagattgagtgtgctgtttcttttgcagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcggtataactgtttatgtcgacttcattaatctataccaagctgaactgaccagaatcctcaatcgtgtttcctcttctgtttccccctctattatgcctatatagtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcattt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