Difference between revisions of "Os04g0121100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0121100| Description = Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein| Version = NM_001058606.1 GI:115456941 G...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0121100|
 
GeneName = Os04g0121100|

Revision as of 19:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0121100

Description

Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein

Version

NM_001058606.1 GI:115456941 GeneID:4334975

Length

5969 bp

Definition

Oryza sativa Japonica Group Os04g0121100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1241288..1247256

Sequence Coding Region

1241288..1241368,1242874..1242904,1243046..1243659,1243773..1243843,1244280..1244525
,1245314..1245440,1246040..1246232,1246703..1247256

Expression

GEO Profiles:Os04g0121100

Genome Context

<gbrowseImage1> name=NC_008397:1241288..1247256 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1241288..1247256 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttgcggtcgccgccaccactgccagatcaactgggacaaccgccgccctcaccggttccgcccgccagggccaccccaaatggactcaactgtagagacagtggtggtatcacgcctgagtcaccaagcttcgctgatgatggatatggtccccctccatccaaatggaaaggaatttgccaagtcggtccctcgttcgaagccaaaagttgcaaccgaaaacttatcggtgcacggtggtatatcgatgacgatactctaagcagcatgagcaagaatgaaattctatctcctagggacgtggaaggccacggcacgcacacggcctcgacagccggtggcaacatcgtccacaatgctagcattcttggtctagctactggaacagttcggggtggcgcgccccgtgcacgagtagccatgtacaagatttgttggtccggcagcggctgctccgctgccgtccagttgaaagccttggacgatgctgtctacgatggcgtcgatgtgttatcactttctcttggtagtccattggaagatctaggcaccttgcacgtcgttgccaaaggaatcccagttgtatactctgctgggaacgatggacccgttgctcagacagtggagaactcatcaccatggctgttaacggttgctgcagccaccatggatcgatccttccctgtggttatcaccttgggcgataatcataagtttgtggcacaatcctttgtcctttcacggcaaacgacaagtcagttcagtgagatacaagttttcgagcgtgacgactgcaatgccgacaatatcaacagcacagtgaaggggaagacggtcttctgcttcgggacaaagttggatccggagccagacatcaacagcatcatcaaggtgacgggtgagaaaggaggaacaggggtgatcatgccaaagtacaacaccgacacgctactgcaggacggccccctcactttgcctattccctttgtcgtagttgactacgagatcgcctacaggatataccagtactacaccaatgaaaatgatggcaccgcaaaagtgaagatatcattaacccaaacaacgattggaaaagtaactgcccctaaagtagcagctttctcatcgagggggcccagttctatctatcctggggttatcaagcctgatattgctgccgtaggtgttacgattttagcggctgccccaaagaatgttattgatttaggtatcccataccatttcgagtctggaacatcgatggcttgcccccatgtgagtggtatcgttgctatactcaaatcactgcatcctgaatggtcacctgctgccctcaaatccgcaatcatgactacagcacttacctatgacaacgatgggatgccgatacaagctaatggaagagttcaaaagattgcggatccttttgattatggagcagggtttattaatccgaatatggcagctgatccagggctcatctacgacatctctgcatccgattatctcaagttcttcaattgcatgggaggactaggctcaggggacaactgcaccacagtgaaaggatcacttgctgacctaaacctcccgtccatctccatccccaacctcaagacaatccaagtcgcgacacgcaccgtcactaacgttggccaggccaatgccgtgtacaaggcattcctccaaccccccgtcggcatcgagatggctgttgagccgccaatgttggtgttctctaaggatagaaaggtgcagagcttcaaggtgacctttaaagtgacgaggaggccaattcagggagactataggtttggaagcttggcttggcacgatggtggtaaccattgggttcggatccccattgcagttcgcatcgtgattgaagagatctactcaaagatctcctaa</cdnaseq>

Protein Sequence

<aaseq>MELRSPPPLPDQLGQPPPSPVPPARATPNGLNCRDSGGITPESP SFADDGYGPPPSKWKGICQVGPSFEAKSCNRKLIGARWYIDDDTLSSMSKNEILSPRD VEGHGTHTASTAGGNIVHNASILGLATGTVRGGAPRARVAMYKICWSGSGCSAAVQLK ALDDAVYDGVDVLSLSLGSPLEDLGTLHVVAKGIPVVYSAGNDGPVAQTVENSSPWLL TVAAATMDRSFPVVITLGDNHKFVAQSFVLSRQTTSQFSEIQVFERDDCNADNINSTV KGKTVFCFGTKLDPEPDINSIIKVTGEKGGTGVIMPKYNTDTLLQDGPLTLPIPFVVV DYEIAYRIYQYYTNENDGTAKVKISLTQTTIGKVTAPKVAAFSSRGPSSIYPGVIKPD IAAVGVTILAAAPKNVIDLGIPYHFESGTSMACPHVSGIVAILKSLHPEWSPAALKSA IMTTALTYDNDGMPIQANGRVQKIADPFDYGAGFINPNMAADPGLIYDISASDYLKFF NCMGGLGSGDNCTTVKGSLADLNLPSISIPNLKTIQVATRTVTNVGQANAVYKAFLQP PVGIEMAVEPPMLVFSKDRKVQSFKVTFKVTRRPIQGDYRFGSLAWHDGGNHWVRIPI AVRIVIEEIYSKIS</aaseq>

Gene Sequence

<dnaseqindica>1..81#1587..1617#1759..2372#2486..2556#2993..3238#4027..4153#4753..4945#5416..5969#atggagttgcggtcgccgccaccactgccagatcaactgggacaaccgccgccctcaccggttccgcccgccagggccaccgtgagtgttgtcgccaaaatcggcccccgccgatgagcgccgttgtcggcgctgaatccacctgcgaccgccatcgcaaccgtcatcgccgaagccgtgtccgctggcgaccgcctccaccgctactagaaccacccgcgaccgctaccaccctcactggatccactcgcatgagatggcatcgttgctaagcactgccctaccggatccaccccctagtagcatcgttgccgccggatctccccaccgaatctgggagcactgccgccgtcgcttgatcctctcgcgctagccactgccgtcgcctgctcctcttgcgtggaagagaatcggagggggatttgaggagatgaggaaaaaattcactggaagggaagggaaggggtagttgaggagtagtacaaatgttttatttaggtgggacccactctaatgccttctttgtcacacatacactgcagtaggtgctattatataaaggctggtcccacatgggccaaccatatgatacaagtgggtcttatacattgctcatgtcctaagactagagaatgagtggatgttattgtttttaagatagatcgaatgagtcctagttttgagttatctatttttataaatacctttaatcttagatctaatagaaaatactttgggtgttgtattttctacttaaactacttaaattatttcaaattgttctaatttaagtgcatgttattaatcagaaggtttaaaaatctatttgatttgttcttaaaaatgcatggatcggtgaacatagtagctagcccgtagaatatatatgacccaacgtaatgaatctctttagtaatatagttaatttggatcttaaatttaaaattttattatagtaaataatctaatggtgtgcaccaatacaaaaaaatagctaaatgattcagacaatatagttgtttaaaatgtgttatcataaaatattttttccatctaactaaaagaggaaaataggagagaaaggaagtaggtggggaggtacatactggatgggagggggtgggatatgcaggacttttttttgtttttatccttttcatttgataaataaatctaatgatagaaaataatgggtccaccttatattagtgaaaatcgactagattttttgtttattctcagaaattttgttatttttataatttattagaaatgtggtggtgtagaagcatttgtaggagtgtaattaggtggtggcttgagagcgttaatatgatgtttaatggatttttagtacataatagatagatgcaagctacttatgactgaagggagtaataatgtagaggttggatggtggagttgtcggttcctgactccattcatcttaaatactaactatttagtactcacgttaagcaaacacaaatggttcctagtattgttacagacgttagtatatttattcacaatccatatgtactagtttatatcgtgtgtctgtcatttgtattacgcttctgcagccaaatggactcaactgtagagacagtggtggtaaagtctattagtaattccccactctacatcatcactttaaccttacttttttgggttaactggttagcagaggtaaattaataatatgccttgtaaaataacatttagaatttcaatcaatatgctcttatcccgtaggtatcacgcctgagtcaccaagcttcgctgatgatggatatggtccccctccatccaaatggaaaggaatttgccaagtcggtccctcgttcgaagccaaaagttgcaaccgaaaacttatcggtgcacggtggtatatcgatgacgatactctaagcagcatgagcaagaatgaaattctatctcctagggacgtggaaggccacggcacgcacacggcctcgacagccggtggcaacatcgtccacaatgctagcattcttggtctagctactggaacagttcggggtggcgcgccccgtgcacgagtagccatgtacaagatttgttggtccggcagcggctgctccgctgccgtccagttgaaagccttggacgatgctgtctacgatggcgtcgatgtgttatcactttctcttggtagtccattggaagatctaggcaccttgcacgtcgttgccaaaggaatcccagttgtatactctgctgggaacgatggacccgttgctcagacagtggagaactcatcaccatggctgttaacggttgctgcagccaccatggatcgatccttccctgtggttatcaccttgggcgataatcataagtttgtggtatatatatattatgtgcagttcattcattctgacttaaattggatatatatcccagatgtgtgaacttaatgatctaatcaattttcactaatgtgtggtgattcttgcaggcacaatcctttgtcctttcacggcaaacgacaagtcagttcagtgagatacaagttttcgagcgtgacgagtaagtgtagtaaatcaaataactaaaatctaaagctagtaaggtaattaaaataagtgctagcgagctacctagcaccaactgatcagtatcatgtacaacggtgtctaataacgggctctcttcgttgtcatgcaagtaaatttgatgacgtggaagaaagagagggaaggaatgagaaacatcgttgctacgcatgacaatggctcagagtcgactcttagcatttattaacggaaaatttgttgcatgagagtgaagaaaaggaaagaagtataattaaaaatatatttagtgcattaatgatttagaaatctcattgtctctactattgtagaaggatagtctctagtgacattaattaacatagagagctcatattagactctacttttgtacatgtcctcataagtggtcatctgttcctgccctgcagctgcaatgccgacaatatcaacagcacagtgaaggggaagacggtcttctgcttcgggacaaagttggatccggagccagacatcaacagcatcatcaaggtgacgggtgagaaaggaggaacaggggtgatcatgccaaagtacaacaccgacacgctactgcaggacggccccctcactttgcctattccctttgtcgtagttgactacgagatcgcctacaggatataccagtactacaccaagtaggtggtaacttaattagagaaagaattaaactacatatatactgaatatatttttggatcattagattgattataccacattcttcttgagaaaatatactccatgccatcaagtttgcgctagttcaataatttacctttgactttctcttttttataatgtaccattgaactcatcaattccttctacaatatgccattggatcatttactttttcaaaaattaccccaaatacccttacgtataagaaacaattgattgactggatagaagttttaaaaagatatgaaattctttgtgtagtctccttacatgatatataagcagatttttttacattaaaaacaccaaacaaaaaatattctatgtaggatgtagcatataagttatattttataaaaactatagtgcaagaatcttggaatttatgtacaatttttttatgttgtgtaaggaggctaaaaaaatttgaaattttctaaatcttctaaatgattaatcaattgcaatcttatatatttgtattggcatttttgaaaaaagaacacttggcccaattgtatattgtagaattatggctaaactcaatggtatataatagaaagatacaatattaatgacatatcattgaaccgatgcaagcttaatggcataaagttgactttccttcttctaactatttagtttaggttgtgcacttgaataattaattgcctttacttctagccatgcactgattagcaatcattcttcttttttgtcaacaaatacaatacaataacagtgaaaatgatggcaccgcaaaagtgaagatatcattaacccaaacaacgattggaaaagtaactgcccctaaagtagcagctttctcatcgagggggcccagttctatctatcctggggttatcaaggtaaaattagttacagtatgtactgataattaatgaaggttcatatacagaattgcctgtactcaaggcaatcgacaaatactttatcacaacatctacgttcatattagggctcaataatgcatatttgtttttcttgaatctgaaaattaattaatatttgtcggaatcatatatattacgttcatttatagctcagtatatatagctaaaggcttcgacggacatgctaaagagagcagtcaaaacaatacaaatgtgtgcaaaattaagttgctgacaacataggcacataactttgctgatcaacatagttttctaaattctaacatcattatcttggaaaggctggctgctgcaagatcactatttgtagttcagctcaattaattaagacagaaataatgtaaaagtaagccagttttatttctcttaccagctaatattcgctaggaataaataactgtaggtatatatccaaatcagaactatcataattgttattaagaacaagttgattatgttattgtttgaactgttttcccattgctcacaatattctgtaatcataacatggatgacgttctctcaaattgcagcctgatattgctgccgtaggtgttacgattttagcggctgccccaaagaatgttattgatttaggtatcccataccatttcgagtctggaacatcgatggcttgcccccatgtgagtggtatcgttgctatactcaaatcactgcatcctgaatggtcacctgctgccctcaaatccgcaatcatgactacaggtaactatttttcttttcataaacaacagatttagtttggagaacacaacttaattttgcgctaatacttcatcattttaaatggaccttatttatttttggcggggaggagaactttgattggtcaatacccaaaagaatagtacattcaaactgcattaattgttgaatagtctcacattagttattgaaggacaagggacctaatatataagtggggagcccctcacctcattggctagtttttggtgaaaaggtctctctacgatccaacattaacttcattatcaatgaacttaaatgaccaaaccagagcaatatgttgctatcccagagcaaccagcacatgctaacggggtcaatactacattttgttttctgaaccgttagccttcttgcaagcaaatatatgcatttgatgtacagattgagttcgtaacgttctggtcattatatttcttcacatccagcacttacctatgacaacgatgggatgccgatacaagctaatggaagagttcaaaagattgcggatccttttgattatggagcagggtttattaatccgaatatggcagctgatccagggctcatctacgacatctctgcatccgattatctcaagttcttcaattgcatgggaggactaggctcaggggacaactgcaccacagtgaaaggatcacttgctgacctaaacctcccgtccatctccatccccaacctcaagacaatccaagtcgcgacacgcaccgtcactaacgttggccaggccaatgccgtgtacaaggcattcctccaaccccccgtcggcatcgagatggctgttgagccgccaatgttggtgttctctaaggatagaaaggtgcagagcttcaaggtgacctttaaagtgacgaggaggccaattcagggagactataggtttggaagcttggcttggcacgatggtggtaaccattgggttcggatccccattgcagttcgcatcgtgattgaagagatctactcaaagatctcctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0121100, RefSeq:Os04g0121100