Difference between revisions of "Os09g0563800"

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(Created page with "{{JaponicaGene| GeneName = Os09g0563800| Description = Conserved hypothetical protein| Version = NM_001070476.1 GI:115480694 GeneID:4347865| Length = 8891 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0563800|
 
GeneName = Os09g0563800|

Revision as of 21:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0563800

Description

Conserved hypothetical protein

Version

NM_001070476.1 GI:115480694 GeneID:4347865

Length

8891 bp

Definition

Oryza sativa Japonica Group Os09g0563800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23237120..23246010

Sequence Coding Region

23237397..23237444,23237800..23237917,23238002..23238057,23238129..23238224,23240374..23240674
,23240763..23240833,23242375..23242503,23242601..23242795,23242951..23243117
,23243210..23243306,23245570..23245575

Expression

GEO Profiles:Os09g0563800

Genome Context

<gbrowseImage1> name=NC_008402:23237120..23246010 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23237120..23246010 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatcggtgtgatgtatccagggatgtcattccctttgttagtgaacaaagaaaagatagggatcttcaaggttctaggaactctgcctatgactacaggacaaattacctcagggaccaagatcatgatttggaaaggtagtgatgagaaaactgttggagagaccctgtacccaccaatcttacatccagtcattgcaactcctctgcaaatgaaaatggtggatgaccccgctctttctaatgtggttggcagagccagtaagatgattggtaatttcatgagttactatactcacctcccacatgaggccacaaagggcaaaatgacatttctcttacatggtccatgtgataaaaaagctgtggttgaagggataggaaggacccttggtcttcctgttgcgagcgtggatgcttcgtcactcatcaaggacttcccttctgactctgtctcacagatcaacacctgcatacagagacctgaatcacgtgatggtccacttctgatcttccttgaccggtttgatgagttggtccctcacaacagatgtggttcaacagttatgactgacataacaaccacccagcttaaattgctgcttgatgatccttgggtgattttcgggcatcgtattactattctggtagtatctgtgaggtggataaacctgatatgcccgactattctctcaagaatcaggacacgattttattgtggaaatgatgagaaagagggggattgggatggtgttggaatgtctcttctaaagttattggaaacaaacaagtcgattgatccaaattcacgctgggttgtgacaaatgccattctgtatgggaacacctcgctcagtaagagtgatgtcaccaaactctttgcagcaacacagtcattcgattccatagtcattgatgcaatgcaagtgctgaaggattttaaaaatactgggtcaaaggcggtgtctgacctgttcctgagagctacagcgagaagaccctgcattatactgattcaacaattagatgctatcaacaacgaaacattaatctccctgatcttacacgagatgaacaacatggatagagatctacatgtgtttgcttccacgaggtggtggcaactcatacaccatatgtttttggagtcacgcctgttcacgaggagagttttttgtggcgtggattcaaaaaaagatgaatgcgattttgtgggccaagctttatttgagatacaacagaggatgggaacagcatcagataagagcacctcctcttaa</cdnaseq>

Protein Sequence

<aaseq>MVIGVMYPGMSFPLLVNKEKIGIFKVLGTLPMTTGQITSGTKIM IWKGSDEKTVGETLYPPILHPVIATPLQMKMVDDPALSNVVGRASKMIGNFMSYYTHL PHEATKGKMTFLLHGPCDKKAVVEGIGRTLGLPVASVDASSLIKDFPSDSVSQINTCI QRPESRDGPLLIFLDRFDELVPHNRCGSTVMTDITTTQLKLLLDDPWVIFGHRITILV VSVRWINLICPTILSRIRTRFYCGNDEKEGDWDGVGMSLLKLLETNKSIDPNSRWVVT NAILYGNTSLSKSDVTKLFAATQSFDSIVIDAMQVLKDFKNTGSKAVSDLFLRATARR PCIILIQQLDAINNETLISLILHEMNNMDRDLHVFASTRWWQLIHHMFLESRLFTRRV FCGVDSKKDECDFVGQALFEIQQRMGTASDKSTSS</aaseq>

Gene Sequence

<dnaseqindica>8567..8614#8094..8211#7954..8009#7787..7882#5337..5637#5178..5248#3508..3636#3216..3410#2894..3060#2705..2801#436..441#acccagcagcagccatcaggcctaccactaccacctcatcctttgattcctctccatctccagtactgcatgctgctgcatcctgcatcctcctccaatcttcctccgtccccttcaccgaggcatcagctagcattgacggatgagcggcgccgttggggagccaccgaacacgaagacgccgtcgacgagcaccccggcgccatggttagaggagagggggcagacaaggaagaggaggaggctccgcccacagagaagaagagcagactcctaccttctatctccaccgctgcgcctccatcctcatcacgcatcttcttgccatcccgtcgctcccaatctccaccgaggtaggtcaaggtggtgatagaagaaggacgccaccgagttcatggccaatctggaagagagttgcgcccttgcagcagtacgatggtggttggttctccgctggtatctacttagtacaatcaatgcagatctggatgaacttttctctgtgattaaactattattattatcttcaagtctcaatagatggtgattgctactgctaagctatacttcctttaagtttctatatcttcaagtctggaagtaaattatgttctttattactacatcacaggattggattttggggaaacaaatctgtactttacctattattatttgagagtagtaattttcttacttcgtgataccattattttcactatatatatttggttgaatgttggaaaaataaactctacagcataagagtgggatgtgcacaccatgattgttaaggatgtagctgattgcatccattcagagaacatattctgtttgtggattgactggattcagtcaagagggtaaaaaaataggctttgcatagtaagttttctggaccagtaaaagatggtaaccacagattttagtttataatgtgtaaccaatcttaaatttagaatttggtaaaaaaattactcagttatggaagatgtaacacatgatgtttgcttccatggaagttggagctacgtcattatctggacaaaaaaaaacaccgcaacaacaaagtgaattaacatcggacaaatttattaagattcaacgtatatcattatcttataaactgaaacaaattttgttaggtttcttacagcagttcttggaatacctgtataagatctgaggagtcacctgaatgttgttagatgatagtgtgcgtacctagtgctgtgtgtgcatgtcttttgtgtacttgaaaactataaaaagaaagtgagtaaatgaagtggtatagcatttcaaagaaaaatgatttcaacagttctttctaataagaattcccacagagttacttatatgtactaaaagtagtactatctgttgcttccagttttaatatcaataagttctgacttcttagcatagaagggcccaaacttcaacaaagatttgatttctttttcatgctttcctcctttgcttgtttgagctcagctatacatatcctacttcagcaaagatgtttgacatgtagagatatctaaaacatcaagtctaccaatagctggtacaaattaatatgcacgtgactaatgaacagtgcaagaaaaatatttctttgttatttttttttaactttatgatctatatctaaaagaactttttaatctatatgaatattcaagcgttttgttattgtagggttggaattgagtaagaataagtgaaaaccaccgttttgttattgtcctgctcaagagtaatggcaccatggagaaaggaaagccgattatgaattcctttgctcatttgttgttaaaatggttaaggcacaaatgcaccagaatgccttttatatgatatgctggcagctgaaaagcaatcagaagctcggcataccactttatatatgaaaccagaatatcacccaagtgatttagatattgtatcgaatatgtcgaatgttccaaaaatcgatcttcttttgtttttccatgatcagcagatgagaggataaactgttgagatgatccaagcatcaaattattactgtgagtacataatagaaataactcaagaacctgaagatctctagcaactatttaatgatgcatgttgtatttggttgccaattattgtatgtattgtattgtattgtgtatggttaacacgaagttttggaattaaagtatattaagagagagtatatatatcctttcaaatgtatgattggtgaataaattttgtataaaatcaaactaattacttaaaaaacatgtcaaatgtatgtgtgtgtgtgctataaagcgggcgtgccaacgaaaaataaaaggataatgggattatggagcggtgaaaaagacaagaggttgacaactcatgtagtggcaaagacagagacacatgacactaaccaaaaataagaggatgataaggggtcatgtagctgtgaaataggcaacaaagtaataacacatgtaacggtgaagaacacggtcagggtggaggaatggatggttgtgcatcagttattgatcgatcctagttctgttggctatagaaaactgaaaatcttggtaaactatggctcttctgtttagatgttgatagtttcaatgaaaacaccaagcagcaaccatgatagcatctgcagttttctgtagtccactaccactctcatatattttgcattttgttgtagatcggtgtgatgtatccagggatgtcattccctttgttagtgaacaaagaaaagatagggatcttcaaggttctaggaactctgcctatgactacaggttggacttattccagcatatatattttaaatctgttgagtgcatactgaaattattataaccaacggtgttttcttttcataaactcccaggacaaattacctcagggaccaagatcatgatttggaaaggtagtgatgagaaaactgttggagagaccctgtacccaccaatcttacatccagtcattgcaactcctctgcaaatgaaaatggtggatgaccccgctctttctaatgtggttggcagagccagtaaggtatggattgagttagttcttctagtggtatgtatgaattgagatagttctagtttgtctaaggatgagatagttctagtttgtctaaggcctttacttgactatatatcttgatctttttttgtttctcatgttgtatctttgttaatttgcagatgattggtaatttcatgagttactatactcacctcccacatgaggccacaaagggcaaaatgacatttctcttacatggtccatgtgataaaaaagctgtggttgaagggataggaaggacccttggtcttcctgttgcgagcgtggatgcttcgtcactcatcaaggacttcccttctgactctgtctcacaggtaagatatggcttaaggtatactttcacagttaatttttgtcattttatttgtttgtatttgatactattataattaactattgaatgaattgtagatcaacacctgcatacagagacctgaatcacgtgatggtccacttctgatcttccttgaccggtttgatgagttggtccctcacaacagatgtggttcaacagttatgactgacataacaaccacccaggtacttactaccagaatcagcctttcaattacctttagggaatcatgtttaactagccacgtagtcacgcgttgcgcgactttatatgcccgtatggacgacttgtatacttatgcctttttttttttttttttttgcggaatcataggacctgttaataacaatccaatgtttctcgctcaaggctcaaatactatgttcaagcgtaaatgtttaatattttacagtgcatatactaccttttctcttccaattacaaaactgaatattcattactctacagagtattaaacaacaacctgtcagtgattcttgccagttcattaagggggaaaaatgtttttgatcatgatgacatcaaggtgtttcagatgcattcatactcttgtattattatgaaatggaatttgtgcgaagtttctgttataactacagttgtaaacatatttaatgtgacctgttgaaatagttaaaatgttttacttctaaaaatcaaagagagtaattataattcttgaagaacctccatctaacaatgacagtacaaataaaattgtgttactaaggaaagcaaaatagccaataacctctagaaaatgatcacaaaacttcagctggcacactgtcttgagttatgcatatgcagtgatacagaacaggtacaatgcaaatacaattaatcgaagctaaccaccagaagtggaagccttgagcttgttcatattgatgaatctgtcatcagacttgtagcaggtgcgatgacagtacacgtagatacagtcaagtatgattgcacacgttgtatatttgtgctatctaatttatatacgatatttctggagtatgattgcacacgttgtatatttgtggtatctaatttatataagatatttctggactctgataaatgtgttctgaaccaaaataaaataggaccaccaataagataaacaattcaagtgtcaatagtttaaatgaatgtataaacatagtgcgaaccaaacataaatctggttattgagaatcagcagttttctcatttaaatgaatacaaatttacttaaatctggtaaatttttgtttaaagctccacctcgctattacctgaagaacagcttgtattaaagagtaccatttttttcaatgtcaatactgaaagcattaaaaaactttggtagttcttcatcttaaccatctaaaaatgaatggacagagcatatatataatagtagtacatttaaaccattttccatagaaattataaattcttatttactcattttacctttgttaaggccatgatgataagtctatattcagattaagtgcctttataggggttaaaagaaattcccaataaggtattccaacttttcatttgattctatctttgcatatgctcttttcagtataacgcttagagtgaaaatcggatggctcacaattttttgatgacgtggatatggtaacttcgcgtgaaagattagttctttcactactttagattcttagctcatacacacattttgttttgcatccagcttaaattgctgcttgatgatccttgggtgattttcgggcatcgtattactattctggtagtatctgtgaggttagtgtcaaattactttttaaaacattattttagatgcatggatttataaattattttgttctaataatattacatgactttcaaggtggataaacctgatatgcccgactattctctcaagaatcaggacacgattttattgtggaaatgatgagaaagagggggattgggatggtgttggaatgtctcttctaaagttattggaaacaaacaagtcgattgatccaaattcacgctgggttgtgacaaatgccattctgtatgggaacacctcgctcagtaagagtgatgtcaccaaactctttgcagcaacacagtcattcgattccatagtcattgatgcaatgcaagtgctgaaggattttaaaaatactgggtcaaaggcggtaagtgttgtttttaaatttattgattcaattttattgaatatgcggtatttcttaatttagttttattaaccatgcatctatatttgtgaaattgcacatttgtgtgactatgaccatcctttaatgaatgttgtgtaaaaagaatcttcatatcgaattctgcaagatggttttacacatcttccccgttattagtgaactttgtaatgtagaagcagagtaaaaatagcaagaacaactcgcttgacacctctgtctgcactggtcaagatcgatccagcaagtatttcttcttcttgctggattcgaaaatagaggttgtaactaacccatgcaaagtgtaaatgttagccaaaaaaagtaaatggcagcaagcatgcatgtactaattctgagatttacaggaagagggttactatgagaacaacctgctttctgaaagcaaataattagcttgctagaaaattaagtgttcgtaaatcatctaccttacttcatatttttgagatagttacacaaattcaacgtgctatttatctgagtgtataggtatagaagtggaagtgtgtataatcaagaggatttgtttaatattatttaagctgacttaaagattatttttacaatacaaagcaaatattaaatagattatgtgaaagctatgaagttgtggtgtaacgtatggagaatagaaacaaaatagtttggtctgatacaatagaagtagttgaaacagcgccccctcaggtcgacaggcacaggacgaggttggcgctgctgccgacggcgaaaaaacttggctttcacttcaatccaaccatcttcaccaggttgcctccgcaagcacacgttggaagagccggcgttcgacttggggaaagccaccggcgaccgcgaaaacaccggtgagtgcaccgccgaaaccaccgcagaggtccccggggaaggcgccgccgagataactggggatggcgttttggagacgtgagacaccgacgtcgatagaagagcctccttgtacgacgaggggctggggtcatcggacaaaggactcaacccacaccaacgctggtgctttgaacgaccaaccgaacggaacctggacgagggagaaactggcgctatgggagagcagggcaccggcctgaaggacgccggcgaggaggtggccgccggcgtggggctggtgggaggggaagcgccacggggagaggaagggacgggagaggagaggacagccattactttagatttacccaaatgcatgtaagttatttgaaggagagcaagtaaaagaggtggaagcattgctccagcagctggtacttcctccatctctctcactcctttcacctagctctgatactaattgttggtaggatcacttctgaacaacactcaatagtctagcggaaactgaaactgaaaatgagctgaaaatcttgcttaactcaagaggggtacatgtccttttataggatcttaagtcggtgctacattatgctacagtaactgacatactatttatcttgctgtttacagctaaagtaaaatctaaatttactactactaccatctgtaagcagctgtatattcttactagctatcctacctgtagcttattgactgcagcagcaaggattatgctaacaagcccatcacgctccttgataaaataagtctattggcctccctcatctcttttggctgagtcttttatggctggaataagtctattttgtatccctctgctctttgggtcgtgcctcaaatggctgaagtaagtctatgttggatccctcaactatttttgacagtgccgtgccgagctggcccgtgccaagggagcagcctaggcatggcccggctgtcgggctatgctggcaggggcccaacccagtcaggccgtgcctgtgccgggccgtcgggcctcgggtcatatggccaactataggaggaggtggtggttcgtgggcggcgaacggcgagattttctttctttttttagccccttgatttggagagtgagaacgtggcatgagtatcaactaatgaaaatatcgggcggtttaagattgcttgatgacatggacgtgtaattttgcaagagatgtttcacctttcacttatttagatttgtttttaggtgtctgacctgttcctgagagctacagcgagaagaccctgcattatactgattcaacaattagatgctatcaacaacgaaacattaatctccctggtaagaaagcttcacctatcaaattatttgtgttgtttagagacatcataatatgattttgtttctttcagatcttacacgagatgaacaacatggatagagatctacatgtgtttgcttccacgaggtatgtataaatctaaaaccgatcatcaacttctttgtgtttttatatagaatttatcagcttgatgtctttctttttaaaaaggtggtggcaactcatacaccatatgtttttggagtcacgcctgttcacgaggagagttttttgtggcgtggattcaaaaaaagatgaatgcgattttgtgggccaagctttatttgaggtattttcatactatgaatataagttactttgcatttcacttctaatctgattgttgctgaattatttacctgcatgtgaccttatggataacatggatctctagctccagctagagtagtcattttaagtttcagccttttattattctgctttacatctttgtaacattcataaattgttgggatgggagggtcagtagctgtttgcaataatgcattaagcaaaagttgagattaaacttacttcttttcaaaagggtttggtgtttgtgtatagtttgttgtttttgtaataagcatgctatgtgtctgccctggtcgaactgaactgaacctgggatttctgcatcacagatacaacagaggatgggaacagcatcagataagagcacctcctcttaaggcaaaggagggagaggagataagataactcaccattagcgagcttactgtattggttatgatgcactggtgaaattcgacgccattagcttttactgtatgtttatgatgggctggtaaaattcaattccgtaatcagtcatggtgagagttgtctggtaactgtgaggaaccttaattttgagcacttgtctgaatttttttttctttcgaggtaacagttcctaaaacttgtcaaactgctggcctgttggccatgcaaatactctattttgac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0563800, RefSeq:Os09g0563800