Difference between revisions of "Os04g0179700"
(Created page with "{{JaponicaGene|
GeneName = Os04g0179700|
Description = Syn-pimara-7,15-diene synthase|
Version = NM_001058710.1 GI:115457149 GeneID:4335094|
Length = 5677 bp|
Definition ...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0179700| | GeneName = Os04g0179700| | ||
Revision as of 19:48, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0179700 |
|---|---|
| Description |
Syn-pimara-7,15-diene synthase |
| Version |
NM_001058710.1 GI:115457149 GeneID:4335094 |
| Length |
5677 bp |
| Definition |
Oryza sativa Japonica Group Os04g0179700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:5420726..5426402 |
| Sequence Coding Region |
5420892..5421197,5421512..5421757,5421980..5422121,5422216..5422431,5422519..5422614 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:5420726..5426402 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:5420726..5426402 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgagtcctatggaagctgtagcccgttccagcctcgtgctcgcacctcgccggcggcgagccctcggcctcctcccggcggcggcggcggccgccccattcgtgctagattgtcgccggcggcataacggaggaatgcgtcgtcctcatgtcagcttcgcctgctcggccgagctcgacaccggtcgccggcagcttccttccacggggactcgagcggtgatgtcgtcctgtcccggatatgttgaggggaggatggtaggagaaaatacaagtcagataaacatgggatgggaggctagaatacttaggcacttggagaacccggagttcttaccatcttcatatgacatagcatgggtggctatggtgccattgccgggcactgatcatcttcaagctccatgcttccctgaatgtgtggaatggatactacaaaaccaacacagtaatgggtcgtggggtgtcaatgaatttgactcatcagccagcaaggatattctcctatccactttggcatgtattattgcacttgagaaatggaatgtcggttcggagcaaataaggagaggattacattttatcgcaaagaatttctccattgttattgatgaccagattgctgcacctataggcttcaacctcacattccctgctatggttaaccttgccattaagatgggtttggaatttcctgccagtgaaattagtattgatcagattcttcacctccgtgatatggaattgaaaagactggctggtgacgaatctttggggaaagaggcatatttcgcctatattgctgaaggtctagaagaaagcatggtggattggagtgaagttatgaagttccaggggaagaatggatcattgttcaactccccggctgcaactgctgctgcattagtccacagatacgatgataaagccctgggatacctatattctgttgtcaataaatttggaggtgaagtaccaaccgtgtatccgctaaatatattttctcagctttcaatggtggatactctcgtcaatattggaatatctcggcacttttctagtgatataaagcgcattttggataagacatacattttatggtcacagagagatgaggaagtaatgctggatttaccaacatgcgcaatggcatttcgccttttgcgtatgaacggatatggtgtttcctcagatgacttgtcccatgttgctgaagcctcaactttccataactcagttgaaggatacttagatgatacaaaatccttattagaattgtacaaagcttcaaaagtcagtttatcagaaaatgagccaatcctagagaaaatgggttgctggtcaggtagcttattgaaagaaaaattgtgctccgatgacatccgaggaacaccaatccttcgagaggtagaatatgctctcaaatttccattttatgccacgctggaacctctagaccacaagtggaacattgaaaattttgatgccagggcttatcagaagataaagaccaaaaacatgccgtgccatgtcaatgaagatctcttggctttggctgctgaagatttcagcttttgtcagtcaacttaccaaaatgaaatccagcaccttgaaagttgggagaaagaaaataagctggaccagctcgaatttacgcggaagaatctaataaacagctatctctctgctgctgccaccataagcccttatgaattgtctgatgctcgcattgcgtgtgcaaaatctattgcgctcacacttgttgccgatgactttttcgatgtcggaagttccaaagaagaacaagaaaatctcatatccttagtcgagaagtgggatcagtatcacaaagttgagttctactctgagaatgtaaaagcagtatttttcgctctatattctacggttaaccagcttggagcaatggcttccgcagtacagaaccgcgacgttacaaaatacaatgttgaatcgtggttggattatttgaggtctttagcgacagatgcagaatggcaacggagcaaatatgtgccaacaatggaggaatacatgaaaaattcaattgtgacattcgcattgggaccaactatactcatagcactgtatttcatgggacaaaatctctgggaggacatcgtgaaaaatgcagagtatgatgagttgtttagactaatgaacacatgtggtcgtctccagaatgatattcaaagctttgagagggaatgcaaggatggcaaactgaacagtgtgtcactgcttgttcttgacagcaaagatgtcatgtcagtagaagaggctaaagaggcgataaacgagtctatatcatcatgtagaagagagttgctacggttggttgttagagaagacggtgtcattcctaaatcatgcaaggagatgttctggaatctttacaagacaagccatgtgttctactctcaggccgatggattttcctcgccgaaggaaatgatgggtgctatgaatggagtaatctttgagccactgaaaactagaggcaactag</cdnaseq> |
| Protein Sequence |
<aaseq>MASPMEAVARSSLVLAPRRRRALGLLPAAAAAAPFVLDCRRRHN GGMRRPHVSFACSAELDTGRRQLPSTGTRAVMSSCPGYVEGRMVGENTSQINMGWEAR ILRHLENPEFLPSSYDIAWVAMVPLPGTDHLQAPCFPECVEWILQNQHSNGSWGVNEF DSSASKDILLSTLACIIALEKWNVGSEQIRRGLHFIAKNFSIVIDDQIAAPIGFNLTF PAMVNLAIKMGLEFPASEISIDQILHLRDMELKRLAGDESLGKEAYFAYIAEGLEESM VDWSEVMKFQGKNGSLFNSPAATAAALVHRYDDKALGYLYSVVNKFGGEVPTVYPLNI FSQLSMVDTLVNIGISRHFSSDIKRILDKTYILWSQRDEEVMLDLPTCAMAFRLLRMN GYGVSSDDLSHVAEASTFHNSVEGYLDDTKSLLELYKASKVSLSENEPILEKMGCWSG SLLKEKLCSDDIRGTPILREVEYALKFPFYATLEPLDHKWNIENFDARAYQKIKTKNM PCHVNEDLLALAAEDFSFCQSTYQNEIQHLESWEKENKLDQLEFTRKNLINSYLSAAA TISPYELSDARIACAKSIALTLVADDFFDVGSSKEEQENLISLVEKWDQYHKVEFYSE NVKAVFFALYSTVNQLGAMASAVQNRDVTKYNVESWLDYLRSLATDAEWQRSKYVPTM EEYMKNSIVTFALGPTILIALYFMGQNLWEDIVKNAEYDELFRLMNTCGRLQNDIQSF ERECKDGKLNSVSLLVLDSKDVMSVEEAKEAINESISSCRRELLRLVVREDGVIPKSC KEMFWNLYKTSHVFYSQADGFSSPKEMMGAMNGVIFEPLKTRGN</aaseq> |
| Gene Sequence |
<dnaseqindica>5206..5511#4646..4891#4282..4423#3972..4187#3789..3884#3600..3712#3306..3520#3123..3220#2930..3050#2625..2845#2060..2240#1677..1959#1470..1519#60..300#attgttagttagatcaggttaattattaacatcacccatttcaatccaacctcgtgccaatggcgagtcctatggaagctgtagcccgttccagcctcgtgctcgcacctcgccggcggcgagccctcggcctcctcccggcggcggcggcggccgccccattcgtgctagattgtcgccggcggcataacggaggaatgcgtcgtcctcatgtcagcttcgcctgctcggccgagctcgacaccggtcgccggcagcttccttccacggggactcgagcggtgatgtcgtcctgtcccggtatatgagatcaaactccctcctggcttaccttggtttgttggatggagtcatggagtcatggggtcctatttagcgcgcgggtctagattcttgaatcacgttgtcttaattttatatgttcaattatatatggcggatctagatatttgttcaaaaatagactcggtgaaaggaaccaccccaacttttagtttgctttgttttgttttctcgatttatatccaaacgttattatacttgtataagtcataatttctactctatagatgccaaaatatagtaatttcttgggtttaattttatcccaaatataataacttaaatactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctatctagattcattaatatcactatgaatatgggaaatgctataatgacttacattgtgaaacggaggaagtatgtaatagacgtctttttaacactgaacaacacataccatccttgacttttattatcaagccaactataacctggggtcccgcacatcgagaaggtaaacaagtatttttacctatccttaatagtcatgtcaaggattaaaaatgttatattttaggacaaaagaagtatttttctactaataagacattacacaaagcataatttctttaacttgctccattaaaaaaaacataagggtgagttgtcgatttattgataaagtgttcaaaatgttgactgatgtataagaaaaaaccattcactttaattgaatacatagccacaataaattattaattattgtactttaggcatcaactagaagcacgtgatgaatttcccaactatgagttgggtttcttctagcctgaaccttcatagcttttggtcccacaatattttgatggctatatatattttaataaaaattaaaatttcttacagtctatgagtagtatgggtacaaagaagatagacggtggttaattacccggtggaccaatacctaaaattctcgttttctgaaagttactttttcaatgaaatgaaatttactgttgtacagttaatatgggtgctgaatatttgtggtttaagagtagtgccatactgatcattgtaacataaatcttcatctgttgaaacaggatatgttgaggggaggatggtaggagaaaatacaagtcagataaacatggtatggtgtacggacatcacatatatcgaactttcctttctgatataattggatggagcttatttaaaagaaaggccgcaataaattttattatctaaagaaaagtgtttgagcatcaaatcttaatcaaaccccttcaccattttacacaaattagggatgggaggctagaatacttaggcacttggagaacccggagttcttaccatcttcatatgacatagcatgggtggctatggtgccattgccgggcactgatcatcttcaagctccatgcttccctgaatgtgtggaatggatactacaaaaccaacacagtaatgggtcgtggggtgtcaatgaatttgactcatcagccagcaaggatattctcctatccactttggcatgtattattgcacttgagaaatggaatgtcggttcggagcaaataaggagaggtatagacatcaatttagttaccttccaataatttgtttcaatgtcttatatgctttcgagatttgaatgataatgaaaaataattaattatgtttgcaggattacattttatcgcaaagaatttctccattgttattgatgaccagattgctgcacctataggcttcaacctcacattccctgctatggttaaccttgccattaagatgggtttggaatttcctgccagtgaaattagtattgatcagattcttcacctccgtgatatggaattgaaaaggtaagttaatgaaaaaaaatgttgtcaaaatagattagtgttgtacccgaaaaaagagcaacttttgtgagtaatgttataattttaaaataaatttttccaatatggaattatgattataagaaaagcttatatatgtttcagttgaaatattattataaaaggcatgcaaatgttttccttgtgacaaaaaatagtatctggttatgtatctatgtcaagctgctgcgtggagtcatattttgtatataaacctatttaattatcatggttatgacttctagcatgttactttacggttattttttttaaaaaccaatggatatagcaataagaatattttcattattattattgagtcgtaatacttttacaattaattagactggctggtgacgaatctttggggaaagaggcatatttcgcctatattgctgaaggtctagaagaaagcatggtggattggagtgaagttatgaagttccaggggaagaatggatcattgttcaactccccggctgcaactgctgctgcattagtccacagatacgatgataaagccctgggatacctatattctgttgtcaataaatttggaggtgaaggtaagaattgtttttccttgtgaaagatgtatacgtgtgtagactatattgccaaatacttaatatggtattgtacccttgcagtaccaaccgtgtatccgctaaatatattttctcagctttcaatggtggatactctcgtcaatattggaatatctcggcacttttctagtgatataaagcgcattttggataagacatacatgtaagaaccatgtctaatcaaaggccttttaagaaccatgactaatcttgacattatctattttgcatgcagtttatggtcacagagagatgaggaagtaatgctggatttaccaacatgcgcaatggcatttcgccttttgcgtatgaacggatatggtgtttcctcaggtattttaataccaaaaagtttcttttcttagcaacactattctcttttgtcttgatctaatttgttgtaagtgatctcacacagatgacttgtcccatgttgctgaagcctcaactttccataactcagttgaaggatacttagatgatacaaaatccttattagaattgtacaaagcttcaaaagtcagtttatcagaaaatgagccaatcctagagaaaatgggttgctggtcaggtagcttattgaaagaaaaattgtgctccgatgacatccgaggaacaccaatccttcgagaggtgagtgcatgaaacttaaaatccccacttcagttggtctttaagtttacatacaattcagttatttttctaatttcaggtagaatatgctctcaaatttccattttatgccacgctggaacctctagaccacaagtggaacattgaaaattttgatgccagggcttatcagaagataaagaccaaaaacatgtaagcatcatatttctgaaaaaaattacgcatggaatcgtgtcaatacatgagctaatatacttttctgaaccaggccgtgccatgtcaatgaagatctcttggctttggctgctgaagatttcagcttttgtcagtcaacttaccaaaatgaaatccagcaccttgaaaggtatttcactggtatactctaggtctctagctcacttgtcttcttaacttccacccttacagtgccagcaaaattttcttttgacagttgggagaaagaaaataagctggaccagctcgaatttacgcggaagaatctaataaacagctatctctctgctgctgccaccataagcccttatgaattgtctgatgctcgcattgcgtgtgcaaaatctattgcgctcacacttgttgccgatgactttttcgatgtcggaagttccaaagaagaacaagaaaatctcatatccttagtcgagaagtatggttcttgaactttattctttcaaaggtagtattgtttgttatgctttattaatgagttatcgttcctgcttttctaatggttgtcataggtgggatcagtatcacaaagttgagttctactctgagaatgtaaaagcagtatttttcgctctatattctacggttaaccagcttggagcaatggcttccgcagtacagaaccgcgacgttacaaaatacaatgttgaatcggtgagtttcatgtgtgatcctctaattacgaatttcataacttttaagtaatagaggcttttagtgaactcaaccaattacatcaaggtgatacaattttgccgagaacacttccggtctctgtataaccaagatgcacatagtcgtatgaaattcatattggcttgaaaacaacaatgtagataagtatgttgacattacaatatatacatgaatttgcagtggttggattatttgaggtctttagcgacagatgcagaatggcaacggagcaaatatgtgccaacaatggaggaatacatgaaaaattcaattgtgacattcgcattgggaccaactatactcatagcactgtatttcatgggacaaaatctctgggaggacatcgtgaaaaatgcagagtatgatgagttgtttagactaatgaacacatgtggtcgtctccagaatgatattcaaagctttgaggtattttaattacttcgcttctaataaattattcgtactttctatattatatattataatatgatctcaatttgccttgaatcaaagtagaacacgaaattagtttcatatattaaatccaccattaaatataattttatagtatatttgttttgcgttacaaatgttgcttcatttttcaattacgattgaaaaagtttaacttagtacaaacaaaaaaagtcttaatatataacgtatggatcagttactactccggccatacaaattaagtttatgattgggtaattctgacaactgatatgctgttgcagagggaatgcaaggatggcaaactgaacagtgtgtcactgcttgttcttgacagcaaagatgtcatgtcagtagaagaggctaaagaggcgataaacgagtctatatcatcatgtagaagagagttgctacggttggttgttagagaagacggtgtcattcctaaatcatgcaaggagatgttctggaatctttacaagacaagccatgtgttctactctcaggccgatggattttcctcgccgaaggaaatgatgggtgctatgaatggagtaatctttgagccactgaaaactagaggcaactagtccatcttaatttggctgagaaatttttaaaaaaaaggttttcctacggtatcgcgagacatccgctttgtaactctaaggtagctgccggtcttatagccaggcgagagttgtaatatgaacctttttcttcttaatacaatgatatacaagccttttacgtatt</dnaseqindica> 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| External Link(s) |
