Difference between revisions of "Os04g0183100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0183100| Description = Conserved hypothetical protein| Version = NM_001058720.1 GI:115457169 GeneID:4335104| Length = 10652 bp| Definition...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0183100|
 
GeneName = Os04g0183100|

Revision as of 19:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0183100

Description

Conserved hypothetical protein

Version

NM_001058720.1 GI:115457169 GeneID:4335104

Length

10652 bp

Definition

Oryza sativa Japonica Group Os04g0183100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5648225..5658876

Sequence Coding Region

5648612..5648635,5650213..5650424,5650828..5650950,5651243..5651297,5652068..5652217
,5652379..5652453,5652525..5652584,5654254..5654311,5656188..5656294
,5656740..5656814,5656903..5657095,5658660..5658745

Expression

GEO Profiles:Os04g0183100

Genome Context

<gbrowseImage1> name=NC_008397:5648225..5658876 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5648225..5658876 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggtcctcctccgcaccagccgtcctcctccggagatgtcgaggtcgccgtagagagcggctccggggcctcgtcctcaaggaacaaactgctgagtatggtgaaaaaacattcagatttgatcggctggacagttattgatgctgaagctgatgcatcagacgtggaaatggatgataaattctggcatgaaatacttgatcttttcttcgtgcatggtagggtttcaaaggggagggaagaggatgaccttgtcttctttgttaataatatgaaattgaacgggtacaggtccagtgataacatggaaaatccacctcccttttttgtgcgaagatgggctcctaagcttgaaaagatcaccaatataaatttagctgatgtcaattgggaacgttcattctatttgaatttaattgctcacacgtcatactctgttacagttgcaatatgcagtatcatggatctttgcaaccgtgcagagaaaagcaaaccattatcaccagtttataaggtcacaaaaactgtgtatgcatccccgagccgcgtaaattttcatcttgatcgaaggaaggcagtagaaacggtacctgcataccccaatatttgtttctcaattgatgacttcgatgatacctttgatgcagttcaggttttatcagaccctgaacattgctactgtgttattctcaatgcacatgatggggcagcatttcctgaaaacactgaatcgaaaaatcctagctcaaatgtgctatctggggtaaacactgggagcaaacaagaaaaaccaccaaagagaactctcttttcaggctacgtcagctaccaaaacgttcgagaagcttatgatgctggcagatcaaaatttgagagcttattctcactcgggcatgaccgcactaaacttgataaactttatatgaggggccctgaaggacgtggagaagttgaagtagctgtttctggaatagcagatcagagccatgagagatcaaagaaagatccaggaaatagctttcgggcccttgtccatagtgcagcatctactgcatcaaaactagcaaagcatgcctacgaggctgcatctaccaacaaacgctttgatgatgagcttctgcctctaaaatgttgcttgatgtcagtatctcttccttgggactacattgcacatgacctgctgcacaaggaaacacctccgttggacctatga</cdnaseq>

Protein Sequence

<aaseq>MAGPPPHQPSSSGDVEVAVESGSGASSSRNKLLSMVKKHSDLIG WTVIDAEADASDVEMDDKFWHEILDLFFVHGRVSKGREEDDLVFFVNNMKLNGYRSSD NMENPPPFFVRRWAPKLEKITNINLADVNWERSFYLNLIAHTSYSVTVAICSIMDLCN RAEKSKPLSPVYKVTKTVYASPSRVNFHLDRRKAVETVPAYPNICFSIDDFDDTFDAV QVLSDPEHCYCVILNAHDGAAFPENTESKNPSSNVLSGVNTGSKQEKPPKRTLFSGYV SYQNVREAYDAGRSKFESLFSLGHDRTKLDKLYMRGPEGRGEVEVAVSGIADQSHERS KKDPGNSFRALVHSAASTASKLAKHAYEAASTNKRFDDELLPLKCCLMSVSLPWDYIA HDLLHKETPPLDL</aaseq>

Gene Sequence

<dnaseqindica>10242..10265#8453..8664#7927..8049#7580..7634#6660..6809#6424..6498#6293..6352#4566..4623#2583..2689#2063..2137#1782..1974#132..217#ggctttgcccgtaataaacccattcaacacccaaacgccaccgagagtcgccggcggcggccgcatccggccatccaccgccgatcgccgccgcccttctctcccgttccttcttcctctccgctctctcgatggctggtcctcctccgcaccagccgtcctcctccggagatgtcgaggtcgccgtagagagcggctccggggcctcgtcctcaaggtacggcacgcacctatatccccttcctccaatccctaaattgggaaccacaactgatcctcccgaggagtggaggacccgccatggctcatacctcgcatccacgccgcgggaggtgccctggacgcccacccctcggctgcccggccgccgccgaggatgatttttctcctcttttttttttaattatttttcacttctgtgagctttgggcagcccttccatgttgcaaaagttgtgaaattcctagcttggcagttgcacatatcgatttcaatcgaggctgcctatacatcatgtgacatattttttggcctcctatcatacagatttcttacccttcagatcaacatctaatggatgacattaatatacacaaacaaaatacaaaaaacaaacaaacgggtcacgtggacaaatctaaagctcacgtgggctcaaatgggctcaagtagatttcaaacttacatcgtaaatacactaaaattacatatgtaattttcagacttacatcgtaaatacactaaaattacctatgtaattaatatgtaattatagtgtaagtacgatgtaattagtacgtgtggggatcataaacaaattaactttggaaaacacgtacggctagtttaacaccagggaacagtaacgtggacctagttaattagcagctagatgcaagcacggatctcacaaaccatcctacggctaaaaaaccgaatgattgaaggctcataaatctgtcaaacgatggttagcgattccgatttcaattacctaaagtaatgttttgaaatctagcacaagttattgctcattgatgctcaatgcattcgagtgaaattacatttactgagaccttagagctatctatgataccattttatatcgtaacaccgctctttagtctttacgatggaaccaagattgccattcaaccttgttaacctgtgttcatattgggagtttttcttttctttgagcagtggtcctcttgttgctattttaagatgatctcatgtaaagattgaatttctttgttgaatggcttcttttcagcctctccttattttctaggtttagcagtgatgtgattagatcatgggggacccaggacaaaataaacaatagtttcagcttcggaagtcttgtctctgctgactatcgatcattcatctcacttcagttgtcattttcactagaactaaagctatctcaacaagcaaagcaccctcctttgatttgcagctccgtctgcatgcttaaccttaacccttgctgatgtcctctatgcttgaagagcgctcttgatcccattgctaaggaaaacatgaccaaaatgatcattcttgtgacttccgctgaaaaaaaaaggacaacatcataccccactgtaacacataccacccaatgatgctggtcagagctaagttatctccctagtggtaatgcattggaaataggaagagatttgattttgttctatttaagcatatcttcatcttctgcgaaaacttatatcctttaaccagtgctcaactttctgtcctgtacttttttttaggaacaaactgctgagtatggtgaaaaaacattcagatttgatcggctggacagttattgatgctgaagctgatgcatcagacgtggaaatggatgataaattctggcatgaaatacttgatcttttcttcgtgcatggtagggtttcaaaggggagggaagaggatgaccttgtcttctttgttaataatatggtacatttcaatctattgattccccttatttagcttgacggtgtggtcttgtatgctaactgaagctcaatattctatgttggtgcagaaattgaacgggtacaggtccagtgataacatggaaaatccacctcccttttttgtgcgaagatgggctcctaaggtaattaagctagactatttgtttaacttgatcaataaatgcatgtgtcccttttggtagaaggaaaatttcaagacttctttctattttggaatttctctgtaatttactgttgagttattctgtttgaaactgtatcaagatgaactacatcatcatgtattgtcaaccataacatattttttcattcatgtttctttccaataatatttatcattcattgcacatttacacttgcaccagcaagtcttatactgcatttctttagcatgtacttgattgtctgccacaatttgacagacttaaatttggtaaatttactttcataagctagtgtttggttcataacatactttctagagcatgagctcaacaatttcttatactacatttatacatactgtcttgattttctatttggcctcttttgttttatgtggagcagcttgaaaagatcaccaatataaatttagctgatgtcaattgggaacgttcattctatttgaatttaattgctcacacgtcatactctgttacagttgcaatatgcaggtaatgtttctgcaacaaatctctcaagatatcctgcatgttttgtatttagtatttaggcaaattttgctacaggacatcgtgacttcgcggttttagccataggacactgcacgaaatggcttttgggggaatacactctataaacgtggtaatttgccagcagacaccgtacccattaaaataatagttttcgtttgaaggagagaaaaaccgcatgagatgtcagaaatacccctggacccacatgtcagctctcccatctctcttgtctctctgtctcctccatcgatgtctcctccatcgatgccacagatgggtttgccggcgatgcggacaaggtggcgccacgggacggctcaccggtggtagctggcgacgcgcttcgccgacctgaccaacaacgtgttccgtgcgcctacctcggcaccacgcccgccggcaggggacgccacgtcggggaggcgtactgccacgactgtgtccagtgtccgcgcatgccgcggcccaagatcctaaacgcgttcgacatcattgcatcgtcgccgagcttcgacctgtccgggctgttccaggagcgcggcgagaggatgcgcttcgtgtccggcgcgtcggtggccgacatcatcgccaagctagaggagatcgccggcatggtgagcttcatggcgcggaccaaggactgccaggtgagcatcgaggcgacgcagaacgggcagaagggcgcgctcgccatctccgccaaggtgttcgagctcacgtgggagctcgtcatggtccaggtgtccatggtccgcctatgagctgttaattttggaggtctgtttgattatccatcttcttgccacgagagaaaaacatctatagcgaatctcgattaatttgccagcatcgaggaggcggcggtgctcggatgtccggcagtcgcgcgcgccctgaaccagtggcggcgctagctgtccggcggtcggaggcggcggggtagggcgcgcatccggagccacctgcggcgctcggatgtccggcgggcgcacgtgaggaggcggcaagcagctttggcgggaggtggtggcggcgggctagagcgcgaggaatcgatgagtggtggcggactggcgcagggaagcgtgggaaggaagggggggatagagagaagagagatgggagagctgacatgtgggtccaagggtattcttgacatttcgcgctatttttctctctccttccagcgaaagttattattttaatgggtgcagtgtcccttggcaaattaccacatttatagagtgtattaccccaaaagtcattccgtgcggtgtcctagagctaaaatcgtgaagtcacgatgtcttgtagcaaaatttacctagtatttatcttgaatgattggcattcagttatttatgttaacaaggaaaagtttatttggtgatctagtgatgcacatcctttctaatgtgcaacttaatggttctaaacttctaatctgtcagtaaaaaagttgcctgtatattctcttaaattcttatccttcctttgctcaaatgtgacactgttgccacatgttgtctgtactagttttatgcttctattttctgtttcttccccgctctagcagttgtgaactggatctaggttaccttctaacttacagaactagtcagatatctttcgttattaatttatactggcatcattgtgtgtgtgggtgtttggggcggggggggggggggggggtactcacaaatatttggagtgcaacaatatccattgtcacacaaactgagacctctgattgtgtcatatgttcctccttagttgatatatatagcaaattattattcaacaattgtgtttcttatgatctactgtacagtatcatggatctttgcaaccgtgcagagaaaagcaaaccattatcaccagtttataaggtaatgtacaagtaagcattctgtgccacttactcgtgatgtttaatgttgagctttgtttcatgactacttatatattcattgtttcagaacattccataattttatccacagttttaaaccaggccagtgagtgaactggctatttcttggttcactagtcaggtttttctgtaggaacacagtctgatgaaggtaacattaaattgtcttgagaaaatcctttaaaagattaacagctattcgagttgtttgccaactaatacctagtattgtttcttacgaacaatggtcctatccacttgattccttcctacattgaaagacaaagatgctggttcaaatctgcatattgcaactcctttaaattttgtttcacctgttttggagctaaacagtccagaacacagacaatactggatcaggcttctgtgtgtttagaggattttaccatccttaagaggtgccaccaggtacaaggtaatgacgggtaccattcaaatctaaccattgatttgctgggaggatgatggccaaaagttaaaaatagcaatgctaggtatctatatccgtttctcacgacagacatgggaatgggatcagaggatcagggaggatgccttgcaaggggaatgcacatgatggcacccaatttgagtctgctgctttgatctgaacagagggaggaatctggatgaggaaaaataatgcgtaactcaaagaacaagactttctcatgaatcgatatcctattatttacagcagatccaagctctggatcttgtttttatagttcatcaatataaaactgccaattccactgtaatctggtattccagcatatagctatttacgtttggttcagcaaacccaacaacaaaattcatagcaacaaacaaaaaataaagaggaagagaggtcagtggggtctcagctcagtactgaaccagcggcgatgggagtggaccagggtggagggaggtccctgccgtcacctgcccccacgttccctgctctctcctcctagcgcatcagaaggtcgtcgagccggtccactgccacatctgccacgcaaaggtcatcgctgtcactgtctgctcatcgttctcgttgttaggccgcccatgaaatcgaggaagcctcccagctaccgccgccctcggccatatctggcacccctgacatcggcggcggccatgtctgtcccaaaggtgggcgatggtcggcaggagagggaagacggggagacagcgcatgagctgcagagccaaggaggtaatgtcgttggatggggagaaatagttgatgcgaaattaccatgttaccctcccaccattagaaatagattggtacctgctctcaataggccgtcgtggcgggcggtacaaaacctttccagccattagatggtgtgtatttgactgctaggattatggtacctcctgccctcaaggactgcagaaagcctcgtgtgtgatcatttggctgggttttctttattcttccaagccttgggttgaaatgaacctgactctgaaagagttgttccattttatttaactcttaacttctgtatttcattgttgcaatgctatctaccctagctaaagtttaacatgttctcagtgttaagtaattccatctcaaactcattgtcttatcaaaacaggtcacaaaaactgtgtatgcatccccgagccgcgtaaattttcatcttgatcgaaggaaggtgattttttttctggccttttctgttaaaagagatggtttttctatatacattcttgtttctttgaacaggcagtagaaacggtacctgcataccccaatatttgtttctcaattgatgacttcgatgatacctttgatgcagttgtaagttcccatttaattccccctagtagaagagatagtgttcagcgttctaacaagtgttgtcatatggatgtatctttaatattgcattgttttcattgttttcatatatatactctataggaaaaccctaatgattaacgtggtcattcaaattttagcaggttttatcagaccctgaacattgctactgtgttattctcaatgcacatgatggggcagcatttcctgaaaacactgaatcgaaaaatcctagctcaaatgtgctatctggggtaaacactgggagcaaacaagaaaaaccaccaaaggttctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacatacgatgcaggtttctttgtagtaccattttcagatggaaagaacttcaaatcactttttttgttgtgagtagttctgcagttagaaatatatgttatcacatcttgcatttttttagataatgtcacataagatcagaagttttaatcagtttttaaaagagttatgcattgttaaacattaccgatctgcagtactttcttgtttccggtagtaattgagtgccaaatccatcatatctttaagactgtgatcattcatttaaaaccgatctactttaaaactgtgagcatttgttcaaacccataagagtcttgttaaacttcggttgttggcaactggtaatttattgtggtcacaaggacaacagtttcaggccccatattatcagtgccatagtaaagtagtattttcttggcacctcaaccttttctagttttatagatataataatattttatatgctttggagggcttgctcagtcgtgccttctcagttgtgcacatctttcactatgctcctaattattttaatataaatttagaactattgacaggttctctctgcctactggcatcactcttgttcaaagcatagttacgctttagaagatatctgcttctgcaacacaactttatgatgtataatgtcatacaatattaatgagtttctcacctacatagggcttctgtgattattattgcagagaactctcttttcaggctacgtcagctaccaaaacgttcgagaagcttatgatggttagtctttcgtccatctaagtatttccaaggaaactattgttcagttggtcttctgaagtatttgcttcctttcaactttatctgcacagaaactattgtcacatgattaatattcctgtcaacatatttcttcctccatagctaaatctaatagaatcatatgtttgatagtactggttttaactgcatcaaccctttgctcaactagtggatttcctgtttaaaaaaattgtaggtacctaacatttcattccttgtaggtttcacattttctgatatcctgttatagctggcagatcaaaatttgagagcttattctcactcgggcatgaccgcactaaacttgataaactttatatgaggggccctgaaggacgtggagaagttgaagtagctgtttctggaatagcaggtcagttatggttagtctgagagtcccaaatcatcagtgccataattatcatgctgtgacatgcaatcatgcattatctgtaatgagtagttctaatagaatggatttgggactcagttaaaataatgacacacatatattgctatggtaattggtaaactactgtcgtatctttatactgttgttgaaatgtttgtttctctacaagttatcactttttggtgcaatgctaggttatagtttgcattttgcattctataacaaatgtacaacattagaactacttccaaatatccttactgccccaccccagacatgcacattcactttttgggttactgtagctctagtgcaagttgttgatccatcaaactctcacacgggaatgattgtcttctaccagatcagagccatgagagatcaaagaaagatccaggaaatagctttcgggcccttgtccatagtgcagcatctactgcatcaaaactagcaaagcatgcctacgaggctgcatctaccaacaaacgctttgatgatgagcttctgcctctaaaatgttgcttgatgtcagtatctcttccttgggactacattgcacatgacctgctgcacaaggtaaaatccgtcactacttgtgaataataattattttgatgactaaaattgttaataactagttttcttttcctgcttttgttttcacaattatcaactattcgctgttgtcaaacaatatctttattctgtgtgagattgttgataactatttttgctttcttgcttttttttgtcacaattatcaagtattggctatcactactggagaactaatcttttgtcgtggtaccaaaaaacacaaatttctcagatctattaccaaccatactaaatatgttatttagtaccggttggtaacaccactagtactgtacaatcactaaacattgtttttagtcccggttcaacattgtcagaccgagtcagatccttagggattaaagatcaaccggtactaaggatcaacactttagtactgattgatgtcaccaaccgatactaaagattattttcaccttcctcgacttcctttacatttatttatttcatgtagatgcatcggccatgtaaacgaagtcgacgaaggtgaaaatggttaaataagcatttaataatttaaaacatcataattgtaaatatacattttcatgtattatcttttttaaaattctaaaaacattttcaatgaattcttcttatttctagtgattttaatgagttttaaatggacttaatcagagctatggttaattatatataaattctagaagttttataaaattgtaagtattttttttcatgtattatacttattttaactatttttagaagttttttaaaattctgagcatattttcaatatattcttatttctaactattttttaaaaaaaaatggacttagttttctgttcttattccttcattttctataattttcctttgttgtctttttttttaacattttcatccaatgtctctaaaattctaaagtactcttattttctctaaaagtttattctctcctctttttccacaactttttgtgagagaaatgtgtagaaacatagctagaaatgtaatatgttaaccatacatcaatagaggatgaaattgctaaccttttagatcctttcgattcgtgtaatatcaccaaatactttccaaaaaaatttggcagcacttctcttcctcctcttggcaacaatggttcgagctagaggaggaagaaggcatataaaagggaaatgagctttggtactggttggtaacaccaatcggtactacagatcaacataatctttagtagcagttggtaacatcaactggaacaagtattagtcacaccaatcgatactaaagatcctgaggggcggcttgacacggtttgacaatgttgaaccgggacttaaaaactatcttttattaccaaccggtactaaagattgtatagtaccgttggtgttaccaaccggtattaaaaaacatctttagtagtgatataactaaaatcactaaagattatagatccgagaaatttgtgtttttttaccacgaaagagatctgttctctagtggtgatatgtaacttatgatatgaaaaagttgaggttgacaggccatgccatgtaacaggaaacacctccgttggacctatgatccgcaacagtttcaaaccaatacgaattttgggaagaacagcatggttgagaagtggtactcatctactgggacatctcatggtcaacaatgagaatttgtttcaggatccttactgggctagccattggggcgagttgaaaggaagaggattgcttgtgttatgaatgttgagactgcgattccagttatgcaacacaaggaatgatcttacgtacatgattttggaaaagtttgtggttagcaagtcttgtgtgctcgatattgtgtaagatatgtgatgtacatgtgtactttaaatagactttgtatagtttttatgcgccgttgtacaatgttgaaagaagacgtgcaaagaaagcatattttaacttttttatcacgagg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0183100, RefSeq:Os04g0183100