Difference between revisions of "Os04g0195000"
(Created page with "{{JaponicaGene|
GeneName = Os04g0195000|
Description = Similar to Vacuolar assembly protein VPS41 homolog|
Version = NM_001058748.1 GI:115457225 GeneID:4335134|
Length = 7...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0195000| | GeneName = Os04g0195000| | ||
Revision as of 19:49, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0195000 |
|---|---|
| Description |
Similar to Vacuolar assembly protein VPS41 homolog |
| Version |
NM_001058748.1 GI:115457225 GeneID:4335134 |
| Length |
7264 bp |
| Definition |
Oryza sativa Japonica Group Os04g0195000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:6504008..6511271 |
| Sequence Coding Region |
6504127..6504414,6504955..6505227,6505310..6505489,6505977..6506237,6506712..6506844 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:6504008..6511271 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:6504008..6511271 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtccacggcggcgcggcgcggccacccgccgccgcacgagaacggcgtgggcgggcacgccgacgacgagccagacgaggacggcgaggaggaggaggaggagggggagggggaggtggaggatgatgaggaggaggagccgcggctcaagtaccagcggctgggcgggagcgtccccgcgatcgtctccaccgacgccgccgcggccatcgccgtcgccgaccgcatggtcgcgctcggcacgcacaacggcaccctccacatcctcgacttccagggtaatcaggtaaaggaaattgctgctcacacagcaactatcaacgacatcagttttgatgcagacggtgaatatataggaagctgctctgatgatgggactgtagtaataagcagcctcttcactgatgaaaaactgaagtttgagtaccatcgacccatgaaagcaattgccttagaccctaattattacaacaactatagaaggttcgctacagggggtttagcaggtcaagtacttgtgctgacaaaaaagtcgtggggaggtggctaccataaaaaggttctgcgtgatggcgaaggaccaatccattctatgaaatggaggacagacctccttgcctgggctaacgatgcaggggtaaaagtgcatgatatgaagacagacaaaggaatcgcgtttatagagaggccaaaaggaattcctcggccagagtttttacttcctcagttggtctggcaggatgataccatcttagttattggatggggaacaagtgtcaagattgcagcaattcgaacagattcatctcaaggactcaatggcatacagaggagtatcactgcaagtaatgagaagtacgtggatattgtgggttcgttccaaacaggctatcacatatccgggattgctccatttggtgatcttttagttgtgcttgcatatattccagaggaggaagacagagaaaacagttttagcaattctgttccttcacgtcagggaactgcccagcgtccagaaatacatcttgtatcatggaaaaatgatgaacttaccacagatgctcttcctattcatggttatgagcattataaggcaaaggattatgctcttgctcatgctcctttctcaggaagcagcaatgcaggtggacagtgggctgctggtgatgaacctttatattacattgtatctcctaaagatatagtggtcgcaaagccaagagatgctgaagaccatatttcttggcttcttcaacatggttggcatgaaaaggcattggctgcagttgaagcaggacaaggacgaaccgagcttcttgatgaggtgggttcgagataccttgatcatttgataattgaaagaaaatatgctgaagctgcacgcctctgtccaaaattgttgcgaggatctccttcagcatgggagaggtgggtctttcactttgcccatcttcgccaacttgctgtattagttccttacatacctacagagaatcctcagctgagtgatacagcttacgaggttgctcttgtagctttaactaccaatccttcttttcatgaacttctcttgacaactgtaaaaaaatggccacctacattatactccgcttcacctgtcatatctgcaattgagccacagctaaattcctcttcaatgactgattcattaaaagaggctttagctgaattgtatgtcatcaacagtcaatatgacaaggccctttctctgtatgctgaactcttgaagccagaagtattcgaatttattgagaagcacaacttgcatgatgccattcatgacaaggttgtcaatcttatgatattggatagtaaaagaactgtaaacctattgatccagcatcgtgatacgatccccccgaatgaagttgtaggacagttgttgcatgctagtaaaagttgtgacaaaagacatttgttgcatctgtatttacatgctctgtttgagacagacatgaatgctggaaaagactatcatgacatgcaggtggagctttatgcagagtatgagccaaggatgctaatacccttcctccgtaccagtcagcattacaggcttgacaaggcatatgaaatctttgcacaaaaagagcttgtacgggagcaagtttttgtgcttggtcgtatgggaaatgcaaaggaagctctctctacaattataaacaaattggaagatattcaggaggccgttgaatttgtgatggagcaacacgatgatgagttatgggaggaattgataagacagtgcctccaaaaacctgagatggttggaatgctgttggaacatactgttggcaatcttgatcctttgtacattgttagtttggttcctgatgggctagaaataccaaggttgcgggatcgccttgtgaaaattgtgacagactatcgaacagaaacttcattaagacatgggtgcaatgatatacttaaggctgattgcgtaaaccttttggtaaaatattatcacgaggctcggcgtggagtctacatggctagtatggacgaggaggtgacaggaactagggttgctgaaggatcttcacgagcaaacgagagatcatcaagtttacgagctttagagatcaaatccagaacaaggtgtggtgctcggtgttgcttgtgctttgatcctttgtcgattcaggacatctctgtcatcgtgttctactgctgccacgcatatcacacgtcttgcctcgaaggcgggttggacttgatgaaatcgaacagtagtactcaggacagcgacgaggatgatgaaggtaccccatcaggcgagtctcgaatgcgctgtgtattgtgtactacagctgctgcataa</cdnaseq> |
| Protein Sequence |
<aaseq>MSTAARRGHPPPHENGVGGHADDEPDEDGEEEEEEGEGEVEDDE EEEPRLKYQRLGGSVPAIVSTDAAAAIAVADRMVALGTHNGTLHILDFQGNQVKEIAA HTATINDISFDADGEYIGSCSDDGTVVISSLFTDEKLKFEYHRPMKAIALDPNYYNNY RRFATGGLAGQVLVLTKKSWGGGYHKKVLRDGEGPIHSMKWRTDLLAWANDAGVKVHD MKTDKGIAFIERPKGIPRPEFLLPQLVWQDDTILVIGWGTSVKIAAIRTDSSQGLNGI QRSITASNEKYVDIVGSFQTGYHISGIAPFGDLLVVLAYIPEEEDRENSFSNSVPSRQ GTAQRPEIHLVSWKNDELTTDALPIHGYEHYKAKDYALAHAPFSGSSNAGGQWAAGDE PLYYIVSPKDIVVAKPRDAEDHISWLLQHGWHEKALAAVEAGQGRTELLDEVGSRYLD HLIIERKYAEAARLCPKLLRGSPSAWERWVFHFAHLRQLAVLVPYIPTENPQLSDTAY EVALVALTTNPSFHELLLTTVKKWPPTLYSASPVISAIEPQLNSSSMTDSLKEALAEL YVINSQYDKALSLYAELLKPEVFEFIEKHNLHDAIHDKVVNLMILDSKRTVNLLIQHR DTIPPNEVVGQLLHASKSCDKRHLLHLYLHALFETDMNAGKDYHDMQVELYAEYEPRM LIPFLRTSQHYRLDKAYEIFAQKELVREQVFVLGRMGNAKEALSTIINKLEDIQEAVE FVMEQHDDELWEELIRQCLQKPEMVGMLLEHTVGNLDPLYIVSLVPDGLEIPRLRDRL VKIVTDYRTETSLRHGCNDILKADCVNLLVKYYHEARRGVYMASMDEEVTGTRVAEGS SRANERSSSLRALEIKSRTRCGARCCLCFDPLSIQDISVIVFYCCHAYHTSCLEGGLD LMKSNSSTQDSDEDDEGTPSGESRMRCVLCTTAAA</aaseq> |
| Gene Sequence |
<dnaseqindica>120..407#948..1220#1303..1482#1970..2230#2705..2837#2938..3028#3455..3557#4091..4194#4343..4436#4519..4674#4758..4820#4922..4987#5204..5404#5533..5610#5699..5818#5916..5996#6082..6167#6454..6535#6627..7016#aggcttcgcttccgtctcgcccaaatcggcgcaccaccaccgccccgccgtccacgaatcgaactgaccggagagatctcgcgatcccctccccaccccttcctgcgccggtggcgaccatgtccacggcggcgcggcgcggccacccgccgccgcacgagaacggcgtgggcgggcacgccgacgacgagccagacgaggacggcgaggaggaggaggaggagggggagggggaggtggaggatgatgaggaggaggagccgcggctcaagtaccagcggctgggcgggagcgtccccgcgatcgtctccaccgacgccgccgcggccatcgccgtcgccgaccgcatggtcgcgctcggcacgcacaacggcaccctccacatcctcgacttccagggtaatcaggtatcgtacccacctctttcccttcacgcatagctcgtagggcggtcgcttgctttgtgggattgggatttctggtaggataccgtggaattggatcgtctcgtctctgcgacctgtagcattggtctactgaattcgatttggttgtagaaaactgttaacctattgtttgtggaagagacgtcacaaaggtgaaattctgtttggggacacctgaaatatagattttgcagagaatatatattttaaggattgtgctagactgaggaatatggttcagtgtaaaatgttttcacgttgttggaggggattacctctggtgacctaaaaaatctaggaggactaggattgtctgctaaatatcggatataaccaagctgaggtggctgtgcatttaacaacattgacacagaaatttcaataaatggagattgcccatagcttccttcggcctgaaatcatgtgatggagcactatcagtaatgaccatggcctgcttagaaaataacattgtcatccattaattcaatacttttgcaggtaaaggaaattgctgctcacacagcaactatcaacgacatcagttttgatgcagacggtgaatatataggaagctgctctgatgatgggactgtagtaataagcagcctcttcactgatgaaaaactgaagtttgagtaccatcgacccatgaaagcaattgccttagaccctaattattacaacaactatagaaggttcgctacagggggtttagcaggtcaagtacttgtgctgacaaaaaagtcgtggggaggtggctaccataaaaaggtgcacttcttctcattgtcctacaagaaaatcaaattgatctggtgatttcaaatggttgtgtgagtctccttacatacaggttctgcgtgatggcgaaggaccaatccattctatgaaatggaggacagacctccttgcctgggctaacgatgcaggggtaaaagtgcatgatatgaagacagacaaaggaatcgcgtttatagagaggccaaaaggaattcctcggccagagtttttacttcctcagttggtctggcaggtaatacacatttatttatgcgaacactatacttttttataccaagtatggctcatttggaacatttcaatttggtcgacattaaaaatatgcacagttagggatcattttttttttcctttcagcaaatagttagtagaatacaaaggatattacagaaaagaaacatcatttcattctggcaaacatataccaaaagaatatatggtgcagcaggaaaaagtttcttgtacattgaaagctttaggattgattttttttcttccaatctagtttagtcagatataaggaactaatggttttaaacctaaaggaaaaggtatacgatagacatgttttcattgttagtcattcctgggagcattatatgtgttttatttgctgagaagtaagtttatagtcactttgctgttaatatatctgattcttttgggttctcattttcaatgaaattgtacatggcatactgactggtttgcatattcaggatgataccatcttagttattggatggggaacaagtgtcaagattgcagcaattcgaacagattcatctcaaggactcaatggcatacagaggagtatcactgcaagtaatgagaagtacgtggatattgtgggttcgttccaaacaggctatcacatatccgggattgctccatttggtgatcttttagttgtgcttgcatatattccagaggaggaagacagagaaaacagttttagcaattctgttccttcacgtcaggtaatcatgatggcttgtcctttgcactgcactctgtaaatctatttttctcctttattgtgtcatgacccgaggtcatgacaggataaacaccgccgggaagatagccgggcggcgtcatctcctggagaagggatgtagatttaggctagggagaagaacattattgggagagagagattagactaactgatattcattgcttaacttgagatgaatacaatccatcccttatatagagatgatatgacttgacccttaagaaactaactcaaactaactctatctaatcctatcctatctcctaaccaactgctacagtactcgtggtactgtttatccgctaggacttggcctcgtgggcctcggcctctctgcccaacgcctatgacatattgtgcaccagattccttttcttatgaagtgatgctgttcccacatttacctttttcgttatgtttaaacactttgtagggaactgcccagcgtccagaaatacatcttgtatcatggaaaaatgatgaacttaccacagatgctcttcctattcatggttatgagcattataaggcaaaggattatgctcttgctcatgctcctttctcaggtttaatgaaatgtgctttaacagtgaatgaacttctcttttcttcttcactgaaacttttctaatgaaggaattttattgttatatttttaccacccaggaagcagcaatgcaggtggacagtgggctgctggtgatgaacctttatattacattgtatctcctaaagatatagtggtcgcaaagccaaggtttgtaatgttgcaaaacaaaggattatattagcttctaagttctgcaattgcaaatgaaagaaggcaataattgattgagcaaaacttctctttttgaaaatgtgatcttccttcgtcatattttctctgattgtaatcttgaagaactccattagtccttcaattttctgcattatttaattgtgatacacatgtaagcttggctacttgcagtagatcacttcagttgcatatctgattctgtggcatttaattttcttctaactacaagtagcatacgtagaacaatactaagctagtttcttctgataatttccagcctatttgtgtttctgagctttctataaggacatggcaaaatttcatttcagaaaatgttgtatctttatatttctactgatataatatgtgctttcaaattagagatgctgaagaccatatttcttggcttcttcaacatggttggcatgaaaaggcattggctgcagttgaagcaggacaaggacgaaccgagcttcttgatgaggtaaagtagaaacagtttgagtttgaacagtaaatgaataatggtatgcattatctgcttgatgatgaggatgctacccttattgtttaggaaccttcaagtagacacctttaaggtccattatggcaactgaggtccccatccccttctatagttttgttggcgattatcacgttcacaatattgagcattttagctgaaaacaatgggacctgtatcatgtaccaataggtgtttatatttaagctggctcgtctttagactattgttgtcatgagttaaggtggtcctaacaatgtgaacaacaaatacattctgaaattctatgcatattttagaagtttgcttcctatcttatatatattatgctggtctgatgcatattttagaagttgacagcacttcaacaacataacccagtcagtatcttatgagcccatttttttaggaaggacgacctcagctattaagaaatctaaccacataatagctaggaacattattgaaattttgttcatgccatcttatgtcaggtgggttcgagataccttgatcatttgataattgaaagaaaatatgctgaagctgcacgcctctgtccaaaattgttgcgaggatctccttcagcatgggagaggtgagaaaaaaagaagtgttgatatacattgtatccttcatcatacgatctggaacaaacacaggagcattatgagattttgatgtgcattgtttgttttagttgatcactagtatatctactgaccataactttttttgtgccacaggtgggtctttcactttgcccatcttcgccaacttgctgtattagttccttacatacctacagagaatcctcagctgagtgatacagcttacgaggtgccattacttctttctattttgcttgcttgctctttacaacacctctgattctaatactaattctaattggtttatgtaggttgctcttgtagctttaactaccaatccttcttttcatgaacttctcttgacaactgtaaaaaaatggccacctacattatactccgcttcacctgtcatatctgcaattgagccacagctaaattcctcttcaatgactgattcattaaaagaggtatggaaacattttcttaatggatgtaagacttacacagtatttttgagctctttgacatcttggttctgtttgccatgtaggctttagctgaattgtatgtcatcaacagtcaatatgacaaggccctttctctgtatgctgaagtaagtattacctaacttgtagttaaaaggttcacattgcattaaattaatagaattttgttttattacctgtattgttgacccaacctcatttcattcagctcttgaagccagaagtattcgaatttattgagaagcacaacttgcatgatgccattcatgacaaggtatggttaaaattcccaaatgtaggataaaactgatctcacttgactttttttttcaagtttgcatttgtgaattgtcaagtgtcatggtagcaattgtctaataatggtacttacatatggttacaatgtagttgaacatgataatatattttagacagagacaggcttcaataacctccatatattcacttatgggccttgcgtatttcgcaggttgtcaatcttatgatattggatagtaaaagaactgtaaacctattgatccagcatcgtgatacgatccccccgaatgaagttgtaggacagttgttgcatgctagtaaaagttgtgacaaaagacatttgttgcatctgtatttacatgctctgtttgagacagacatgaatgctggaaaagactatcatgacatgcaggtatgctgattcttctgtgaacaagcagtctttatcatactgttcacctcctgcccatttgccctatttctgtagctctagtttttgtattagtataacagctaaccacattacactttgtgttgtaggtggagctttatgcagagtatgagccaaggatgctaatacccttcctccgtaccagtcagcattacaggcttgacaaggtcataaactcataattctcaaaagagaaaaaaaaagcattcattatcttgagaaggatgagtaatgaatgacatgtggttatttcaggcatatgaaatctttgcacaaaaagagcttgtacgggagcaagtttttgtgcttggtcgtatgggaaatgcaaaggaagctctctctacaattataaacaaattggaagatattcaggaggtcctaatgtggttatgatcattttgttaaaaatttggggctagactagcaattctagactgtggttggattgcaataacagtaaccttggatgcaggccgttgaatttgtgatggagcaacacgatgatgagttatgggaggaattgataagacagtgcctccaaaaacctgagatggtaattgagctgtgtattctgttcaatactcttgacactgatgttccttctgtttattcattgcatttttgtaaccgttgagcaggttggaatgctgttggaacatactgttggcaatcttgatcctttgtacattgttagtttggttcctgatgggctagaaataccaaggtaaatgtgccaaaatttgtttcgttcaaagataatgagaacctacccccaaaaaaaaaaacatcacatatacaccttacgaaacgaatttctatcatcagatgatcagaaattcagaatccaccaattacttatatacaaattattagctatgaccatcactcagtttattataataattatagggctatattgacactgtagaatagagatgctacaactttatttaatccaatccttctcttccctggttcaagtgttcattgaaatattacgcttttgataggttgcgggatcgccttgtgaaaattgtgacagactatcgaacagaaacttcattaagacatgggtgcaatgatatacttaaggttaatattcaagaaaaagatatacttaaggttagttgtctatttattaccccacatctatcttgacgtttgatgaccctgccatgtacaggctgattgcgtaaaccttttggtaaaatattatcacgaggctcggcgtggagtctacatggctagtatggacgaggaggtgacaggaactagggttgctgaaggatcttcacgagcaaacgagagatcatcaagtttacgagctttagagatcaaatccagaacaaggtgtggtgctcggtgttgcttgtgctttgatcctttgtcgattcaggacatctctgtcatcgtgttctactgctgccacgcatatcacacgtcttgcctcgaaggcgggttggacttgatgaaatcgaacagtagtactcaggacagcgacgaggatgatgaaggtaccccatcaggcgagtctcgaatgcgctgtgtattgtgtactacagctgctgcataataacttatttcgtaacgagtagtccatatccatgtgttgtgttgtaagtttgagccttgtaattagcgtgttattctggcgtgataaatatgtacaataggttaattctttggggggaagccatatcctcagcaagaggagttttgtgtagatttgacagatatgttgattacttgagcaaagttgtacggcatttttcttaatgccacgagtgccagaccatcggaagttcattccgattcttatcc</dnaseqindica> |
| External Link(s) |
