Difference between revisions of "Os04g0275100"

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(Created page with "{{JaponicaGene| GeneName = Os04g0275100| Description = EGF domain containing protein| Version = NM_001058887.1 GI:115457503 GeneID:4335352| Length = 5307 bp| Definition =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0275100|
 
GeneName = Os04g0275100|

Revision as of 19:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0275100

Description

EGF domain containing protein

Version

NM_001058887.1 GI:115457503 GeneID:4335352

Length

5307 bp

Definition

Oryza sativa Japonica Group Os04g0275100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:11616161..11621467

Sequence Coding Region

11616485..11617671,11617759..11617920,11620490..11621462

Expression

GEO Profiles:Os04g0275100

Genome Context

<gbrowseImage1> name=NC_008397:11616161..11621467 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:11616161..11621467 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatccacacgaaaacggctctgctatgcctcctaggcgccgtagcaactacggcatggctctccttcgccgtcgcgcaaccacagccgccgccggcctgccggagaagatgcggcgacgtcgacatcccttacccgttcggcctcaacggcgatgcccccggctgcgccctgggccacggcacctacggcttcaacatcagctgcaacgacaccggcaacggcgtgtacaagcccttcatctgggacgtcgagctgctcggcgtcttgctgccggaaggccaggccaggatcctgatgagcatctcctcctactgctacaacccggccaccggcgccatggacggtcccgaaaacaacacctgggcgctcgacttcacctcgtcgccgtacaggttctcccacaccggcaacgtgttcaccgccatcgggtgccgcacgctcgcctacatcggcggcgacaacgtggacgccgacgtcggcagcctgaccaccgggtgcgtggccacgtgccggctgcaggccggcaacctcaccgtcaccgacgacgacgtcggcgcctgctccggcatcggatgctgccggacgtccatccccgtggggctccagtactactacgtctggttcgacgaccgcttcaacacgacggccatccacaacgtgagccgctgcagctacgcggcgctcatggagaagtcgtcggcgtcgtggttcaggttcaccccggcgtacgtcacctcgtcggcgttcaacgacaccttcaacgggcaggtccccttgctgcttgattgggccatcggaaacgagacctgcgagcaggcgaggcgagcgagtcccgagtcctatgcgtgcaggagcagaaacagtgagtgctttgactcgccaagcgggctaggctacatctgcaattgttccaagggattccgtggaaatccttacctgcacccagaagatcccagcagttgccaagatattgatgagtgcacggatcagaacatgaataacaattgccacgggatttgtcgtaatactcttggtgggttcgaatgtatttgtcctgcgggtacccgaggcaatgcctcagttggacagtgtcagaaagtgctaacacatggagtactgttggctataggaatttgttcctcaacggttgttggccttctaattttccttggcatagaatggatcaagtataaacgtcgattggttagacaagatctcatgaataaaagggatgcatattttcgtcaacatggaggccaattattacttgatatgatgaaattagagaatcaagtttcatttaagttgtatgacagagaagaaattgagttagcaacaaacaacttcagggagagcgcaatcctcggtcagggcggtcagggtactgtttacaaaggttttgatctagatccagaaaacaatcctgtggcaataaagagatgcaagggaatcgatgcgaataggaggatggaattcggacaagagttgctcatactctcccgagtgagacatgagtacattgtcaaacttcttggttgttgtctgcagtttgaagttcctgttctagtatatgaatttgtgccgaataagaccctacactatttgattcatggccaaagcgatgcatccactagaacactagatatccgactggaaatcgctgcccagtctgctgaagcacttgcatacctacattcacttgatcatcctatttttcatggggatgtgaaatctgccaacatacttattggtgacaaatttactgcaaaagtttctgattttgggtgctcaatatttagggcagcggctgatgaaaatattaatgtagtgaagggaacaattggttatctagatccagaatacctcatgacgttccagttgactgataagagtgatgtctacagctttggcattcttcttctagagctcttgacacgtaggaagcctctatccaatgaggtgagcctcgcctctctcttccaagatgctatgaagaagggaaacattgatcatcacatagataaagaaatactacatgaggataacatggaactgctatacgaattcgcatgtctagcaagccagtgcttagttatggacagtgagaacaggccagcaatgagccatgtggcagacatacttcggcaattggcagatacggcgtcacaacaacacactggcacacttcagggtattcgctcactcagattattgggaaactcaagtggtagcatctcagagccgtgttattctcctgttaaaacaatggagtatgacagcaggaagacatctatgggcattgaatttgcaagataa</cdnaseq>

Protein Sequence

<aaseq>MTIHTKTALLCLLGAVATTAWLSFAVAQPQPPPACRRRCGDVDI PYPFGLNGDAPGCALGHGTYGFNISCNDTGNGVYKPFIWDVELLGVLLPEGQARILMS ISSYCYNPATGAMDGPENNTWALDFTSSPYRFSHTGNVFTAIGCRTLAYIGGDNVDAD VGSLTTGCVATCRLQAGNLTVTDDDVGACSGIGCCRTSIPVGLQYYYVWFDDRFNTTA IHNVSRCSYAALMEKSSASWFRFTPAYVTSSAFNDTFNGQVPLLLDWAIGNETCEQAR RASPESYACRSRNSECFDSPSGLGYICNCSKGFRGNPYLHPEDPSSCQDIDECTDQNM NNNCHGICRNTLGGFECICPAGTRGNASVGQCQKVLTHGVLLAIGICSSTVVGLLIFL GIEWIKYKRRLVRQDLMNKRDAYFRQHGGQLLLDMMKLENQVSFKLYDREEIELATNN FRESAILGQGGQGTVYKGFDLDPENNPVAIKRCKGIDANRRMEFGQELLILSRVRHEY IVKLLGCCLQFEVPVLVYEFVPNKTLHYLIHGQSDASTRTLDIRLEIAAQSAEALAYL HSLDHPIFHGDVKSANILIGDKFTAKVSDFGCSIFRAAADENINVVKGTIGYLDPEYL MTFQLTDKSDVYSFGILLLELLTRRKPLSNEVSLASLFQDAMKKGNIDHHIDKEILHE DNMELLYEFACLASQCLVMDSENRPAMSHVADILRQLADTASQQHTGTLQGIRSLRLL GNSSGSISEPCYSPVKTMEYDSRKTSMGIEFAR</aaseq>

Gene Sequence

<dnaseqindica>3797..4983#3548..3709#6..978#gaataatgacgatccacacgaaaacggctctgctatgcctcctaggcgccgtagcaactacggcatggctctccttcgccgtcgcgcaaccacagccgccgccggcctgccggagaagatgcggcgacgtcgacatcccttacccgttcggcctcaacggcgatgcccccggctgcgccctgggccacggcacctacggcttcaacatcagctgcaacgacaccggcaacggcgtgtacaagcccttcatctgggacgtcgagctgctcggcgtcttgctgccggaaggccaggccaggatcctgatgagcatctcctcctactgctacaacccggccaccggcgccatggacggtcccgaaaacaacacctgggcgctcgacttcacctcgtcgccgtacaggttctcccacaccggcaacgtgttcaccgccatcgggtgccgcacgctcgcctacatcggcggcgacaacgtggacgccgacgtcggcagcctgaccaccgggtgcgtggccacgtgccggctgcaggccggcaacctcaccgtcaccgacgacgacgtcggcgcctgctccggcatcggatgctgccggacgtccatccccgtggggctccagtactactacgtctggttcgacgaccgcttcaacacgacggccatccacaacgtgagccgctgcagctacgcggcgctcatggagaagtcgtcggcgtcgtggttcaggttcaccccggcgtacgtcacctcgtcggcgttcaacgacaccttcaacgggcaggtccccttgctgcttgattgggccatcggaaacgagacctgcgagcaggcgaggcgagcgagtcccgagtcctatgcgtgcaggagcagaaacagtgagtgctttgactcgccaagcgggctaggctacatctgcaattgttccaagggattccgtggaaatccttacctgcacccagaagatcccagcagttgccaaggtgaatgttcccttttcttgattgaggaattaaaatagttgctgtgttagttagtttggacagtaacataggattaattaggtaataatcaaacaacaaacagagtattattaggttttaattgaggatcagagcaattaattaatttagacttatggtgtttcttatttgtagtatttgattttgttaaaaggacaccttagtattatggacgtgactacacagctagtggtaactagtttgtctaaaccagctaccagttcatctatgagagacattatcaacctatatttcaaatacaattttctattaaactactcatccgatttatgatccgattgcaccattatgtttgtaacaattaaatctttaaaacaagatcacacatgattatattttgataaaaaattataaattacttttataatatatctaaattactttcaaatttcactaaattacttcttatacatgtaaaagtaaattcaatgaagcctaaaagtaatttgcatatattatagaagtaacttataaccaaaagaaagtaactttaatgaatgtcttttttaattggatgtgactacacagctagtgatagctagtttgtactccatctagtatctcctttcaacttgaaaaatacgatagtatcttcttttctcattctatatgaaaaacaaaaatgaaagaaaaagacaatcaatgattaaacagatttatagagagctacttttgaaccatgcaaaagttacttccaattaacattgaaattacttttaaaaaatattaaacttatgtgtgttgatctgtgctgattaaatttaatttctagataaagtcatatttttatccctacgacgaatttacttctaatgtcgtgacaaaattacttccgttttgttttaagttacttttataatatatttaaattacttttagactctattaaatttacttttatatgtctaagaagtaatttagtcaactctaaaagtaacttatatatatgataaaagtaacttacatatataataaaagtaatttacaaatataaatattttttcatcgtaatataatcatgtaagatattgttgtgaagatttaattgtaacgaacacaatggtgtaatcagattgtagatcggataagtaatttgagagaaaactttgtttgaagaggaaaaggacgtacatgtatattaaaaaaaatgcatgcatgtattaccatgtaatagctggacttctccacgtttctctatgttggcgtcgctagttaaggcaaaattgagatacctctctaaatagattttacatagtattatttagctacacattgtagacgcacaatctatttgatttggttcaaattaaacggacctttcaaaaaaagttccattgtctcgttcacccaattagggcctatttagttagcgaaaagaaaatttgttggtgtcacatcggatatttgactggatatcggaaaaggtttcggacataaataaaaaaactaatttcataactcgcctggaaaccgcgagacaaatcttttgagcctaattaatccgttattaggatatgtgggttactgtagcacttatggataatcatagactaattaggctcaaaagattcgtctcgcgatttcccccctaattgtgcaattagtttttcttttaatcttatttaatggttcatgcatgtgtccaaagattcgatgtgatgtttttgggaaaaatttttgggaaactgaatcaggcattagtttggatctcttgtgaagagaatgtcgatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatctttgtttttagtagtactgcttcctcctactctaaagaagtgcagtttgaactagtcaaacacatattaagaaaaaggttaaaagactaatatacctttcactactgttgacagtacactaacttggacccgatgtcgcgcacaagtcgtattgttggaatcggctatatcggcttatttagctcgactcagactcagccgatcctaaccgtagccgatctgaactccagccgtctttgtttccgaacttgatctccgcctccaactccgctttgatcaaatcctctttcttgacatagatgctaccaaatttgtttgttaacaactactagataattatttttctataagaggacctatataagttgtaggcggaccataaatgatcgtgcctttaaaaatcgaggctcattttcatatgcggtctaaaaatctatttatgcagacagaccacggcatgaaaagatgagcatattttttcatgtggttctcttaagtggctaaaactacacttatttagggctacagggagtaactgctaccatgaaagtgttagtctatacatgtttgttttggtttctatatttgctatgatatatttttcacttaaactctctctctctctctgtttaatgactaattgtagatattgatgagtgcacggatcagaacatgaataacaattgccacgggatttgtcgtaatactcttggtgggttcgaatgtatttgtcctgcgggtacccgaggcaatgcctcagttggacagtgtcagaaagtgctaacacatggagtactgttggctataggtataaatgcattacaattatgttttgtgtgtttgtatatatatgaagatgcttacttaatttactaatttgatctaaaaaaatcaggaatttgttcctcaacggttgttggccttctaattttccttggcatagaatggatcaagtataaacgtcgattggttagacaagatctcatgaataaaagggatgcatattttcgtcaacatggaggccaattattacttgatatgatgaaattagagaatcaagtttcatttaagttgtatgacagagaagaaattgagttagcaacaaacaacttcagggagagcgcaatcctcggtcagggcggtcagggtactgtttacaaaggttttgatctagatccagaaaacaatcctgtggcaataaagagatgcaagggaatcgatgcgaataggaggatggaattcggacaagagttgctcatactctcccgagtgagacatgagtacattgtcaaacttcttggttgttgtctgcagtttgaagttcctgttctagtatatgaatttgtgccgaataagaccctacactatttgattcatggccaaagcgatgcatccactagaacactagatatccgactggaaatcgctgcccagtctgctgaagcacttgcatacctacattcacttgatcatcctatttttcatggggatgtgaaatctgccaacatacttattggtgacaaatttactgcaaaagtttctgattttgggtgctcaatatttagggcagcggctgatgaaaatattaatgtagtgaagggaacaattggttatctagatccagaatacctcatgacgttccagttgactgataagagtgatgtctacagctttggcattcttcttctagagctcttgacacgtaggaagcctctatccaatgaggtgagcctcgcctctctcttccaagatgctatgaagaagggaaacattgatcatcacatagataaagaaatactacatgaggataacatggaactgctatacgaattcgcatgtctagcaagccagtgcttagttatggacagtgagaacaggccagcaatgagccatgtggcagacatacttcggcaattggcagatacggcgtcacaacaacacactggcacacttcagggtattcgctcactcagattattgggaaactcaagtggtagcatctcagagccgtgttattctcctgttaaaacaatggagtatgacagcaggaagacatctatgggcattgaatttgcaagataagggcatctgccatgtataagcattaaacttagttgcacaagcctatagaaagtttttgtctgagctacatttggcttctatgtcgctctgagattgttcaacatggaaggaatgagaacgtaccaattcccatgatagcgtaatatggtgatccgaacatgtaaaggtggtaaaacatgctttggcatggaattgtcaacactttgctgactgtacatgctatggtccaaaaccgaaaaattccgattcatttgtgctaaaacagatatgtccggacctattttctatgcttaatatcctcttacattctatattttcctcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0275100, RefSeq:Os04g0275100