Difference between revisions of "Os04g0286000"

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(Created page with "{{JaponicaGene| GeneName = Os04g0286000| Description = EGF domain containing protein| Version = NM_001186908.1 GI:297722946 GeneID:9268253| Length = 4682 bp| Definition =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0286000|
 
GeneName = Os04g0286000|

Revision as of 19:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0286000

Description

EGF domain containing protein

Version

NM_001186908.1 GI:297722946 GeneID:9268253

Length

4682 bp

Definition

Oryza sativa Japonica Group Os04g0286000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:12391575..12396256

Sequence Coding Region

12391575..12391768,12393047..12393693,12394345..12394881,12395313..12395465,12395541..12396256

Expression

GEO Profiles:Os04g0286000

Genome Context

<gbrowseImage1> name=NC_008397:12391575..12396256 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:12391575..12396256 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaacgctcgcgagctgccccaagagttgtgggcagatgagcatccactaccccttcggaatcggagcaggctgcttccggcagcctgacttcaacctcatctgcgacaactccactcagcccccaaagctcctcttgcatgatggcaccaccgaagtcgtcggagatgaagattcactacgccggaccaggtatcccgtcagaggtgtgaggatctggcgtagtgattccagtattggcatggacgtaggattatcggagtggatcgatatcaacatttctgccactatccctatggtacctggcgttgctgagtacaattattcatggaaccttagttctttcagtatctttgatgcttctctgaatattactggttgcgagttcgacacatatataatcaacaacaagagctatagtcccactacagcaatctgcaaaagtagctgccccaacaaagagatcactgaaacggtagctcgacaaagctgtaatggtactggatgctgcacaatttatgttggaatagatgttgctaacttgcatctccgtttcgtccgccatggcagagaaggttttcttggagtgaactctagtcgaagctccttatggaatagaattaacatagttagcagttatgccagcgttatgtgggggataaacaatcgaccgacgtgcgctagcgtaaaggatcagaaccaaacggattatgcatgtgcgagcgccaacagtcaatgcgtggacagcatctcatctaccgatcttggctaccgctgtgaatgcaacagtggttatatcggcaatccttatgtacttgatggctgcacacgtgacgaagtactaaatgtgtcaagcgctagtggtgaggtttatgaactttgttcgctgaaagcaggctatcacccagttcaacaaaaggcaaactgctcccgatggtgtgggaatatcagtgttccatttccttttggtctagaggaaggctgcactgcaagaaaattatttgaactcaattgcacaaatgtgacatcttctacgctccaatttaaccgcggtcatgttgtgacagacatagatctcgcagaaggggttgttggcatcaaacttattacctcatattacgtagagcaggtgtttaggatgtacatatcaggagaaccttacctatatgcaagtttcggagaagcagtgatctctgtgcattgggctgctgccaatctgacatgtcaagaggcccagaagaaccactctcgatatgcatgtgttagtgcaaacagcacatgtttaggtgtcaactctactgatggttatgttggatatcggtgcaaatgcatggatggttttcatggaaatccttatgatgctaatggttgtgaagatgttgacgagtgcaagaaaacaccaggcatcttcaaaggcatatgccacaataacattgggagttaccaatgcatggagtgcctagacaaaacagagtatgatgtgacagctatgcagtgtgtttcaagaaaaaaacaaaatcttctgataggtattgtaattggacttagtgttggattcaccattctactctttgtaatgagtgggatgcttcttcttcggagatggaaaagggacattcaaagacaattacgaagaaattactttcgaaaaaatcaaggtcttctattagaacaactaatatcatccgatgaaaatgcgagcgataagacaaaaattttctccttagaagagcttgaaaaggcgacaaataatttcgaccccacacgtatcctcggacgtggagggcatggcatggtatacaaaggaatcttatctgatcaacgtgtggttgccattaaaaagtcaaagataattaagcaagatgaaattgataattttatcaacgaggttgccatcctctctcaaataaatcatcgtaatatcgtaaggctctttggatgttgtcttgaaactgaggtcccactacttgtctatgacttcattccaaatggatcattatttggaactctccatgctgatgcaagtagtagttttcaattatcttgggatgactgcttaagaattgccactgaggcagcaggagcactctgttatcttcattcagcagcttcagtatcagtctttcatcgtgatgtgaagtcagctaacatacttttagatgcaaactgcatagccaaagtttcagattttggtgcttcgagattggttcccattaatgaaacccatgttgttacaaatgtataa</cdnaseq>

Protein Sequence

<aaseq>MATLASCPKSCGQMSIHYPFGIGAGCFRQPDFNLICDNSTQPPK LLLHDGTTEVVGDEDSLRRTRYPVRGVRIWRSDSSIGMDVGLSEWIDINISATIPMVP GVAEYNYSWNLSSFSIFDASLNITGCEFDTYIINNKSYSPTTAICKSSCPNKEITETV ARQSCNGTGCCTIYVGIDVANLHLRFVRHGREGFLGVNSSRSSLWNRINIVSSYASVM WGINNRPTCASVKDQNQTDYACASANSQCVDSISSTDLGYRCECNSGYIGNPYVLDGC TRDEVLNVSSASGEVYELCSLKAGYHPVQQKANCSRWCGNISVPFPFGLEEGCTARKL FELNCTNVTSSTLQFNRGHVVTDIDLAEGVVGIKLITSYYVEQVFRMYISGEPYLYAS FGEAVISVHWAAANLTCQEAQKNHSRYACVSANSTCLGVNSTDGYVGYRCKCMDGFHG NPYDANGCEDVDECKKTPGIFKGICHNNIGSYQCMECLDKTEYDVTAMQCVSRKKQNL LIGIVIGLSVGFTILLFVMSGMLLLRRWKRDIQRQLRRNYFRKNQGLLLEQLISSDEN ASDKTKIFSLEELEKATNNFDPTRILGRGGHGMVYKGILSDQRVVAIKKSKIIKQDEI DNFINEVAILSQINHRNIVRLFGCCLETEVPLLVYDFIPNGSLFGTLHADASSSFQLS WDDCLRIATEAAGALCYLHSAASVSVFHRDVKSANILLDANCIAKVSDFGASRLVPIN ETHVVTNV</aaseq>

Gene Sequence

<dnaseqindica>1..194#1473..2119#2771..3307#3739..3891#3967..4682#atggcaacgctcgcgagctgccccaagagttgtgggcagatgagcatccactaccccttcggaatcggagcaggctgcttccggcagcctgacttcaacctcatctgcgacaactccactcagcccccaaagctcctcttgcatgatggcaccaccgaagtcgtcggagatgaagattcactacgccggaccaggtcatctctgacgggcccaaaccctcacctttgacgggtttggtcttggtcagtgattagtggtcactgatgacaaaatcacctgtgacggatgaaacacccgtcacagataacccatctctgaccggtatataagtcatctctgatgggttaaaacttgtcacccgtcacagatgagtcatcagtgacgtgtcgtaactacctgaccgtcactgatgactcatctctgacgggttgtaacttacgacccgtcactgatgacaaagtaagaaatacaatttttgaattttaaacgcaacaaaaaaacctcaaaaaaatattttgaattttactagccatcctatacatggttacatatcactacctacaaattcacaatttttcacgcaatataacttgtagcgattcgaactcaagacctcaacctccatatagagctcccttaccaactcacctactcaacacatattgactactaacccaatgttattattttgtctatgcttatctgaatcatttaacatatatttaacaccctaaatgacttcaaatgaaaatattatcaactaaatagttatagatctcatcgtgttttataacttttacatagaaaatatcttcatccgatgttgtttgaagaattcaaaatttcatttttcaaaatatatctcactttataacatgtaaattttgtgaaatgaaaatattttcaattataatgttgtagatctgattgagttctatgactttgatacggggcatgtatccatccatgtcatttgaaaaaaaactcaaaattttgtttttaaaagtagatctgatcacttgtaatgcatgttcggggatgtaaacgatctctaatagaaatgttgttagttataaagttgtggatatcattgagagctacaacttttatataggacatgtttcaatccgaggttttttgcaaaatttaaaaatttgaatccgagttttgcttccaacccgtcactggtatccgctcacctgtgacgggccagaaatgaaagccgtcacaggtgcggcccatcacctctgacggcttctaatgtatcggcccatcacaggtgaggggataccagtgacgggttggaagcaaaactcgtcgctggtatacctctgacgggttttcctttcggcccgtcacaggtgaggggatacctgtgacggtccgcggccggatggctcaccggtgacgttatcccgtctgacccgtcagaggtaatggtcactagtgaccaaatcgtttgcccgtcacaggtatcccgtcagaggtgtgaggatctggcgtagtgattccagtattggcatggacgtaggattatcggagtggatcgatatcaacatttctgccactatccctatggtacctggcgttgctgagtacaattattcatggaaccttagttctttcagtatctttgatgcttctctgaatattactggttgcgagttcgacacatatataatcaacaacaagagctatagtcccactacagcaatctgcaaaagtagctgccccaacaaagagatcactgaaacggtagctcgacaaagctgtaatggtactggatgctgcacaatttatgttggaatagatgttgctaacttgcatctccgtttcgtccgccatggcagagaaggttttcttggagtgaactctagtcgaagctccttatggaatagaattaacatagttagcagttatgccagcgttatgtgggggataaacaatcgaccgacgtgcgctagcgtaaaggatcagaaccaaacggattatgcatgtgcgagcgccaacagtcaatgcgtggacagcatctcatctaccgatcttggctaccgctgtgaatgcaacagtggttatatcggcaatccttatgtacttgatggctgcacacgtgacgaaggtgatttatatatatatactccaccagtacgtctgcaataagtctgttttgccttccgatgattgttgcaaatttgatgctgatctattttctacgtacctctcctatttactctttatgtatttcaattgggaaagtgaattcatccctcgaggggatatccctcgttttgtgcatgtcacctaaatagttataaaaaaatatgaaaaaaattgacaacatagattaatatgaaatatatcactcgacaaacatgcaagtttaatttcaacttctacaagttgtaacaaaaataacaaatatagttgcgaatgtgcgataactattttcagtttaatttgttatttttgttgcaacttatagaagttgaatttggtcttgcatgtttgtggagtgatatattttatattaatctatgttgtcaatttttttcaaattttttgataactatttagatgacatgcaaataacgagggggtgtcccctcgagggatgaaaatccacatccatttcaattccaaagcattagtattgtatgataatttatctgaacgaacaaaactttgtgaggcttggcatttcattcaagtccactagctttctgttttacttgagtagttgcatcatattgtttatgctaactattaaaagtactaaatgtgtcaagcgctagtggtgaggtttatgaactttgttcgctgaaagcaggctatcacccagttcaacaaaaggcaaactgctcccgatggtgtgggaatatcagtgttccatttccttttggtctagaggaaggctgcactgcaagaaaattatttgaactcaattgcacaaatgtgacatcttctacgctccaatttaaccgcggtcatgttgtgacagacatagatctcgcagaaggggttgttggcatcaaacttattacctcatattacgtagagcaggtgtttaggatgtacatatcaggagaaccttacctatatgcaagtttcggagaagcagtgatctctgtgcattgggctgctgccaatctgacatgtcaagaggcccagaagaaccactctcgatatgcatgtgttagtgcaaacagcacatgtttaggtgtcaactctactgatggttatgttggatatcggtgcaaatgcatggatggttttcatggaaatccttatgatgctaatggttgtgaaggtatgctactctgctttgccatgttttttgtcatccccaagtgtttttcaaccactccctagagtatttggtctaaggtttctttacatattctagtagtgcattttttattaatggattgagttgcacaatgcggagtgagatgcataatcctagaaaatagtgaggctcctcaaacctcgcttgaatttatgttgtggtgggcaaaggttacccttttttttttgcaacaagcaacaaacttttttttctctaaaatttgcaatgtagacaatctaatgggtgcaaagtttctcataattgttattgggagcaagactaccaatgataataccgtttgaattttactattatgaccatcacctctatgtttgtaattttattcacgtttcaaacattgcatttcaatttgatgaagttccttattccagatgttgacgagtgcaagaaaacaccaggcatcttcaaaggcatatgccacaataacattgggagttaccaatgcatggagtgcctagacaaaacagagtatgatgtgacagctatgcagtgtgtttcaagaaaaaaacaaaatcttctgataggtatgttctcaattgttttccacttctcaaactacgtgaaaacaaaacactaattcggcgataaaatccctttaggtattgtaattggacttagtgttggattcaccattctactctttgtaatgagtgggatgcttcttcttcggagatggaaaagggacattcaaagacaattacgaagaaattactttcgaaaaaatcaaggtcttctattagaacaactaatatcatccgatgaaaatgcgagcgataagacaaaaattttctccttagaagagcttgaaaaggcgacaaataatttcgaccccacacgtatcctcggacgtggagggcatggcatggtatacaaaggaatcttatctgatcaacgtgtggttgccattaaaaagtcaaagataattaagcaagatgaaattgataattttatcaacgaggttgccatcctctctcaaataaatcatcgtaatatcgtaaggctctttggatgttgtcttgaaactgaggtcccactacttgtctatgacttcattccaaatggatcattatttggaactctccatgctgatgcaagtagtagttttcaattatcttgggatgactgcttaagaattgccactgaggcagcaggagcactctgttatcttcattcagcagcttcagtatcagtctttcatcgtgatgtgaagtcagctaacatacttttagatgcaaactgcatagccaaagtttcagattttggtgcttcgagattggttcccattaatgaaacccatgttgttacaaatgtataa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0286000, RefSeq:Os04g0286000