Difference between revisions of "Os04g0286300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0286300| Description = EGF-like calcium-binding domain containing protein| Version = NM_001058911.2 GI:297602370 GeneID:4335383| Length = 5...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0286300|
 
GeneName = Os04g0286300|

Revision as of 19:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0286300

Description

EGF-like calcium-binding domain containing protein

Version

NM_001058911.2 GI:297602370 GeneID:4335383

Length

5208 bp

Definition

Oryza sativa Japonica Group Os04g0286300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:12412568..12417775

Sequence Coding Region

12414843..12414918,12416132..12416284,12416360..12417600

Expression

GEO Profiles:Os04g0286300

Genome Context

<gbrowseImage1> name=NC_008397:12412568..12417775 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:12412568..12417775 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttatgttggataccaagtgcaaatgcatggatggttttcatggaaatccatacgtcgttaatggttgtgaagatattgacgagtgcaagaaaacacctggcatctgcaaaggcatatgccacaatgacattgggagttaccattgcatggagtgcccagacaaaacagagtatgatgtgacagctatgcagtgtgtctcaagaaaaaaacaaaatcttctgataggtattgtaattggacttagtgttggattcaccgttctactctttgtattgggtgggatgcttcttcttcgtagatggaaaagggacattcaaagacaactacgaagaaattactttcgaaaaaatcaaggtcttctattagaacaactgatatcatctgacgaaaatgcgagcgacaagacaaaaattttctccttggaagagcttgaaaaggcgacaaataattttgaccccacacgtatcctcggacgtggagggcatggcatggtatacaaaggaatcttatctgatcaacgtgtggtagccataaaaaagtcaaagataattaagcaagatgaaattgataattttatcaatgaggttgccatcctctctcaaataaatcatcgtaatattgtaaggctttttggatgttgtcttgaaactgaggtcccactacttgtttatgactttattccaaatggttcattatttggaattctccatgctgatgcacgtagtagttttcggttatcttgggatgactgcttaagaattgccactgaggcagcaggagcactctgttatcttcattcagcagcttcagtatcagtctttcatcgtgatgtgaagtcagctaacatacttttagatgcaaactgcacagccaaagtttcagattttggtgcttcgagattggttcccattaatgaaacccatgttgttacaaatgtacaaggcacctttggctacttagatccagaatactaccacaccgggcaattgaatgagaaaagcgacgtctacagctttggagttgtacttattgagctactacttaggaaggaacctatttttacaagtgaaacaggtatgaagcaaaacttgtcgaactattttctttgggaaaaaaaggtgaagctaattagggatatagtggctgatcaagttcttgaggaagcaaccgaggaagaaattaacaatgttgcctctcttgcggaagattgcttgagtctacgacgggatgaaagacctactatgaagcaagttgagttggcactacagtttttgctaaacaaaaggttgaattcataccgcactgttgaagcaaacaaggaagagatggatccctttattatgacaaaagttcaacatagcactgagaattcaaatgttgaatttctgagcaataaagcaactatatcgtcctatcagcctggcttggagcacgagtttatgtcatctgccactataccacgctag</cdnaseq>

Protein Sequence

<aaseq>MLMLDTKCKCMDGFHGNPYVVNGCEDIDECKKTPGICKGICHND IGSYHCMECPDKTEYDVTAMQCVSRKKQNLLIGIVIGLSVGFTVLLFVLGGMLLLRRW KRDIQRQLRRNYFRKNQGLLLEQLISSDENASDKTKIFSLEELEKATNNFDPTRILGR GGHGMVYKGILSDQRVVAIKKSKIIKQDEIDNFINEVAILSQINHRNIVRLFGCCLET EVPLLVYDFIPNGSLFGILHADARSSFRLSWDDCLRIATEAAGALCYLHSAASVSVFH RDVKSANILLDANCTAKVSDFGASRLVPINETHVVTNVQGTFGYLDPEYYHTGQLNEK SDVYSFGVVLIELLLRKEPIFTSETGMKQNLSNYFLWEKKVKLIRDIVADQVLEEATE EEINNVASLAEDCLSLRRDERPTMKQVELALQFLLNKRLNSYRTVEANKEEMDPFIMT KVQHSTENSNVEFLSNKATISSYQPGLEHEFMSSATIPR</aaseq>

Gene Sequence

<dnaseqindica>2276..2351#3565..3717#3793..5033#aggatagtctgaccaccaacagaaaggaaaagaacatgaatctcctctgtgcaatagcaatactcccggtgattcttgtggccttactagatactataccgctggcaagtgcatcgtctctgatgaatcacagccagccatccatggcaacgctcgcgagctgccccaagagttgtgggcagatgagcatccactaccccttcggaatcggagcaggctgcttccgtcagcctgacttcaacctcatctgcgacaactccactcagcccccaaagctcctcttgcatgacggcgtaaccgagatcatcggggatacagattccagttttgacatggacgtgggctcaacggagtcaatcgatgtcaacatttcctccaccatccctatgctatctagcatctctcattacaactattcttggaatctcagttctttttctatcgaatatgttattctgaacattactgggtgcaacttcgacacatatatcattaaccccgacaccgatattcgcacaaggatctgcaggaacagttgccccaaggaagaaatcacagaagcagtggctcgacaaagctgtaatggtactggatgctgcacatatgatatttacggtgttgctaacttgcagctcagtttcgtccgtggggatgaaggtttacttggagggaactctagtcgaaactccttatggaacataatcaacataagaagctggtacgcctatgtcacgtggagcataatcgatcaaccgacatgtgctagtgcaaaggataaccgaacggattacgcatgtgtgagcgccaacagtacatgcatagacagcttcaattctatggaatatcttggctacctttgttattgcagcagtggtttcataggcaatccttacgtacttcatggatgcacacgtgacgaaggtgcttttttacatacacatgacaacttgcagttaatctgtttggtttgcaaagcttgcaaatttgatttctggtttattttctatgtatcccactacttattttttctgtctatcaactccaaagtactattttgtgataacttatctcgattctcaacggacaaaacagagcagtgtagccttaattttagtagctaccaaatcaatcatgtattatgagaacataatttggagtatgatgtagagggtcctctttaagaggaaatactaaactattttcccttttgatgcataagagtgatggttttattttccattttttttatcatatcgaaaatcttgtaatgaaaaatacacgatgtttcataatattgcacgtgcacatagattcttttacttggataatattatacatactaaatcttctagtattagacgacatgtgttagttgttttaaaattaatttcaacagtgtagcatcattaaaagattgtgcaggaaattaactcgcatcaattttacagaatgaataagatatttttagataaaattgtttacgtttccatctagagaacgaataggtgtcttcagttaatatgtaactttcatatatactagctttttaagttatcattaatggtataaaagatgtttgtttttagtaactatgaagattttgcttaggttctttgttctaaaaaataatttgagcaagcatgaaagtttattaatcgttgtagctaaaagtcaatagcattacatcaactatcattaattttgacatggatattgtactcctgagtcctgagaagcccttaatttggagctcaaattttcgttgtagtctactagcttatcctggcactgcaatagttcagtcatggtttacagtactaactactaaaaattactagtagtgaagttcataaactttgttcactgaaatcaggatattatccagttcaacaaaaggcaaactgctcccgacggtgtgggaatatcagtgttccatttccttttgggctagaggaaggctgcgctgcaagaaaactatttcaactcaattgcacaaatgtgacatcttctacactccaatttgaccgcggtcatgttgtgacagacatagattttgcagaaggggttgttggcatcaaacttgcctcatatttcgaagagcaggagttcagtatgtatagatcaggagaacctgacctatatgcaagttttggagaagcagtgatctctgtgcattgggctgctgctaatctaacatgtcaagaggcccagaagaaccactctcgatatgcatgtgtcagtgcaaacagcacatgtttaggtgtcgactctacttatgcttatgttggataccaagtgcaaatgcatggatggttttcatggaaatccatacgtcgttaatggttgtgaaggtatcccgctctcctttcccttgttttttcatcatccccaattgtttttcatccactcccaagagtatttggtctaagttacctttacatattctagtagtgtattttattaggggactgtctatagatcatttgacaaaaaccctcttagaaatcttgcaaattttagaccatccgattgctttaagattcgtgcaggcaaccaaaccctaaaacaccaccccctatcccgattcctcctcacgccgccgctctccctagcgcgagcgcgccaccctagcgcgcgccgcctccgccgcagccccagcgtgccgccgcccggctggccggaaggtgtgaacagcgccggcaaggcctcctggccggcctcctccccctccccctcccccctcgcctcccctcctcaggccatagaaggcgagatagatcgcccgccccattgtcttcctcatctccggtgactcctcgccgccggatccaccacagtcggccaccacaagacacaaactcgctatgcccccgccaccaacaccggccaaccgccctcctccatccccgcggctccggtgctgccgccgacgcctcgccgcccgcccgtttcgtcgcccaccgccgggccgccgcctcccacgaccatccctctaagcccggcgacctcccctttctccccaccatcccacccctcccaccccaccccaccccaggaccctaatccattggccttcgccggagtttgggttgttgccggcgccggagaagaagaggagttcgtcggagttagagaagaagcagctggagcacgaatcacgaagcacatctagtgaaccaaaatttgtaacatttggaggtaggttttatgtcgactgaagtttagcaattccgatttattaatggattgagttacacaatgcggagtgagatgcataatcctagaaaatagtgaggctcctcaaacctcgcatcaatttatgttgtggtaggcaaaggttaccgttttatttttctttttgcaacaagcaacaaactttttcttctctaaaattcgaaatgtagacaatctaatgggccaaagtttctcataattgttattgggagcaagactaccaatgataataccgtttgaattttactattatgaccatcacctctatgtttgtaattttattcacgtttcaaacatagcatttcaatttgatgaagttccttattgcagatattgacgagtgcaagaaaacacctggcatctgcaaaggcatatgccacaatgacattgggagttaccattgcatggagtgcccagacaaaacagagtatgatgtgacagctatgcagtgtgtctcaagaaaaaaacaaaatcttctgataggtatgttctcaatggttttccacttctcaaactacattaaaacaaaacactgattcggtgataaaatccttttaggtattgtaattggacttagtgttggattcaccgttctactctttgtattgggtgggatgcttcttcttcgtagatggaaaagggacattcaaagacaactacgaagaaattactttcgaaaaaatcaaggtcttctattagaacaactgatatcatctgacgaaaatgcgagcgacaagacaaaaattttctccttggaagagcttgaaaaggcgacaaataattttgaccccacacgtatcctcggacgtggagggcatggcatggtatacaaaggaatcttatctgatcaacgtgtggtagccataaaaaagtcaaagataattaagcaagatgaaattgataattttatcaatgaggttgccatcctctctcaaataaatcatcgtaatattgtaaggctttttggatgttgtcttgaaactgaggtcccactacttgtttatgactttattccaaatggttcattatttggaattctccatgctgatgcacgtagtagttttcggttatcttgggatgactgcttaagaattgccactgaggcagcaggagcactctgttatcttcattcagcagcttcagtatcagtctttcatcgtgatgtgaagtcagctaacatacttttagatgcaaactgcacagccaaagtttcagattttggtgcttcgagattggttcccattaatgaaacccatgttgttacaaatgtacaaggcacctttggctacttagatccagaatactaccacaccgggcaattgaatgagaaaagcgacgtctacagctttggagttgtacttattgagctactacttaggaaggaacctatttttacaagtgaaacaggtatgaagcaaaacttgtcgaactattttctttgggaaaaaaaggtgaagctaattagggatatagtggctgatcaagttcttgaggaagcaaccgaggaagaaattaacaatgttgcctctcttgcggaagattgcttgagtctacgacgggatgaaagacctactatgaagcaagttgagttggcactacagtttttgctaaacaaaaggttgaattcataccgcactgttgaagcaaacaaggaagagatggatccctttattatgacaaaagttcaacatagcactgagaattcaaatgttgaatttctgagcaataaagcaactatatcgtcctatcagcctggcttggagcacgagtttatgtcatctgccactataccacgctagaatttattcagtttccagttctgtgctaggccatgatgcctgttgtttctcttgacaatgtgagataatgtaccttcaatatactgcacgttttaatttgaagtacacttgtaataaggcaaaatactgtgtaaaaaattatttaattttataaagttattccggtggaatggac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0286300, RefSeq:Os04g0286300