Difference between revisions of "Os04g0321700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0321700| Description = Similar to Serine carboxypeptidase I precursor (EC 3.4.16.5) (Carboxypeptidase C)| Version = NM_001058999.1 GI:115457...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0321700|
 
GeneName = Os04g0321700|

Revision as of 19:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0321700

Description

Similar to Serine carboxypeptidase I precursor (EC 3.4.16.5) (Carboxypeptidase C)

Version

NM_001058999.1 GI:115457727 GeneID:4335479

Length

4984 bp

Definition

Oryza sativa Japonica Group Os04g0321700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14863415..14868398

Sequence Coding Region

14863581..14863664,14863920..14863965,14864207..14864320,14864913..14865037,14865143..14865208
,14865386..14865625,14865713..14865793,14865991..14866092,14866192..14866229
,14866310..14866412,14866493..14866615,14867757..14867833,14867944..14868089
,14868168..14868337

Expression

GEO Profiles:Os04g0321700

Genome Context

<gbrowseImage1> name=NC_008397:14863415..14868398 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:14863415..14868398 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcgcaccgccgccgccgccgccgccgcgccgccgccgctgctgctgctctccgccgcagccgccatcgccatcgccatcgccgtcgccgtcgcggcccccgacggccacctagtcgccagcctcccgggcttccatggcgccttcccctccaagcactactccgggtacgtgacggtggacgaggggagcgggaggcggctgttctactacctggtgacgtcggagcgcgacgcggcggccgaccccgtcgtgctctggctcaacggcggcccgggatgctccagcctcgacggcttcgtctacgagaacggccccttcaatttcgagcgtggcagcgatccgggtggcctcccaaatctggagctcaacccctacagctggtccaaggtttccaacgtggtgtacctcgactcccctgctggtgttgggatgtcgtactcgttgaataaatcagattacacgacaggtgacctaaaaacagcggctgatgcacacaccttccttctgaagtggtttgagttataccctgagttccagtcaaatccgttctacatgtcgggagagtcatttgcagggatctacattccaacactagctgatgaagttgtaaaagggatagaaaaggatctgaagccaagaatcaattttaagggatatctaattggcaatggagcaactgatcaggactatgatttcaattcgtttgtgccgtttgcacatgggatgggtctcatctcaaccgaattgtttgaggatgcaagtactgcatgccatggtacattttggggcaaagttaataatctgtgccaagaaaagatagacagagtgcattgggaactcaaggacctgaacaagtacaacatccttgctccctgctaccatcaccctgaaattcaagaattagagttcaagaacagcagcttgccatcaagttttagaaagctaggtgagacagagaagcgatttccagtgagaaagcgaatggctggccgctcttggcctctccgtgctcctgtgactcgtggacgcatgacgatgtggcctgaacttggtggtagatcactcccctgcacgagcgacgaacttgctaatgcatggctggatgatgaagatgtaagagctgccattcacgcggaaccgaaaagcttaattgggtcatgggaactgtatactgcaagaatagagtactaccatgatactggagacagcatggtgaagtaccacaagaagttcacagccatgggatatcgcgcacttatttacagtggagatcatgatctctgtattccctatgtcggaacggaagcatgggttagatccatgggataccgagtaattgatcattggcgaccatggtactttggagggcaagtcgctggatatacacaaggttatgaacacaatctcactttcctcaccataaagggagctggacacactgtcccggagtacaagcccaaggagacgcttgcgttctatagccactggttgtccgggaagaagatttga</cdnaseq>

Protein Sequence

<aaseq>MPRTAAAAAAAPPPLLLLSAAAAIAIAIAVAVAAPDGHLVASLP GFHGAFPSKHYSGYVTVDEGSGRRLFYYLVTSERDAAADPVVLWLNGGPGCSSLDGFV YENGPFNFERGSDPGGLPNLELNPYSWSKVSNVVYLDSPAGVGMSYSLNKSDYTTGDL KTAADAHTFLLKWFELYPEFQSNPFYMSGESFAGIYIPTLADEVVKGIEKDLKPRINF KGYLIGNGATDQDYDFNSFVPFAHGMGLISTELFEDASTACHGTFWGKVNNLCQEKID RVHWELKDLNKYNILAPCYHHPEIQELEFKNSSLPSSFRKLGETEKRFPVRKRMAGRS WPLRAPVTRGRMTMWPELGGRSLPCTSDELANAWLDDEDVRAAIHAEPKSLIGSWELY TARIEYYHDTGDSMVKYHKKFTAMGYRALIYSGDHDLCIPYVGTEAWVRSMGYRVIDH WRPWYFGGQVAGYTQGYEHNLTFLTIKGAGHTVPEYKPKETLAFYSHWLSGKKI</aaseq>

Gene Sequence

<dnaseqindica>4735..4818#4434..4479#4079..4192#3362..3486#3191..3256#2774..3013#2606..2686#2307..2408#2170..2207#1987..2089#1784..1906#566..642#310..455#62..231#aacctccaacaaagagaaaacaaggacccatcgtcgcctcgcctaatcatcatcctttccgatgcctcgcaccgccgccgccgccgccgccgcgccgccgccgctgctgctgctctccgccgcagccgccatcgccatcgccatcgccgtcgccgtcgcggcccccgacggccacctagtcgccagcctcccgggcttccatggcgccttcccctccaagcactactccgggtgcgtctcgtgtcgcgcgccgccgctcttctcttctcttatcatctgaccgacgacgcgccgtggtgttcgtcgcaggtacgtgacggtggacgaggggagcgggaggcggctgttctactacctggtgacgtcggagcgcgacgcggcggccgaccccgtcgtgctctggctcaacggcggcccgggatgctccagcctcgacggcttcgtctacgagaacggtgcgctccaatctccttgttcaccatcgatttaatcgccattgattaggattcaagtgctccattccattccatccaatccattggattaatttgcatattcagcgcaggccccttcaatttcgagcgtggcagcgatccgggtggcctcccaaatctggagctcaacccctacagctggtccaaggtgatagctctgcactgctctgctccttaatctctgtttctgaaacctcttctccgtaatccccgggggattaggtgtgcacctttgtggtctttgtgctaatttttagtaccttttactctttacaaagataaaacaactagtagtaactgatctagtttcttcagatgctttgttccgctatttgtgtcacaattagttgtcacgtagcaggggtgtttatttttgcatatttcataggatgtctcatgtgtctggttgttgtcactgagctttggtgtgctaagcttaagaaaagaagaaattaggtagctgagagcatcaccgacagaatgtgtatagtcctgagaaaactcctctctccaaaagaaagcctaaatttaattgagtgaagtattccaaaaactaaaaaactaagagtgggctcttatgttaaactaccaaccgaagtatttatttttgcacagaccccgcacaccaaaaaaaaaagatcgctcctacacgtgcgcgatctccctcctcgcgcacaaagagaaaacctcgcgggaaagagagattagggttggaggtgcggtgtcgctctccctcaaatgaagagagcgaaggatgcggggatggggtttccaacaaattaggatcaggataggttatctgttagaggcattttttttaccaaaacccaaaaaattaggattagggatagaataagggcattgttgatgatgctattggcattgttgatgatgctattggaggttgattttcaacgcattaagtattactccctccgtccaaaaaaactcaacctagtaataggatgggacacatcctagtacgtccagattcgttgtactaggatgtgtcccatcctagtatgaggttgggtttttttggacggagggagtaactattataaacttaaaaaatgatttatttgatatttttaactaacttctatatataatcttttttttgcaaaaagcgcaccatttaacagtttgaaaaccgttttaacagaaaatgagatggagttgaagaaaagagcagtacctaagtcactcttaacgttctatcaactcttttttggctcaaaaaatatctatacaacatcaagtgagtgattaaatatggcactaaataggtttccaacgtggtgtacctcgactcccctgctggtgttgggatgtcgtactcgttgaataaatcagattacacgacaggtgacctaaaaacagcggctgatgcacacaccttccttctgaaggtacctactccctactgtggttgcaataatatcaatatcacttcggaaaatttttatgttgattctatgcattgttgcagtggtttgagttataccctgagttccagtcaaatccgttctacatgtcgggagagtcatttgcagggatctacattccaacactagctgatgaagttgtaaaaggttgagtttgtcagtaaaaaatatatatagaaactattattatcaaaagtttcctacttatgttgtttatgtcctgacagggatagaaaaggatctgaagccaagaatcaattttaaggtcctcccattttcatttgtcgggagatgacgtcatacaacaactctacatgcatgcgaaaattgtctttgggctcacaatttaaaggttatttttcagggatatctaattggcaatggagcaactgatcaggactatgatttcaattcgtttgtgccgtttgcacatgggatgggtctcatctcaaccgaattgtttgaggtcaagaaatcaatgcctccgctcttgtgctctttcacctcaaaacagtaaaagaatctgtctaaatacttctgtctaaaagaatatgttaaacgagggttgtgctcactggtaatgtcagaggagatagacaacacagaaaaaaatctgatgaaagttaacaaagctaaaaaatgatttgagttgctttcttgcaggatgcaagtactgcatgccatggtacattttggggcaaagttaataatctgtgccaagaaaagatagacagagtgcattgggtaacttccctgtgccagcacatgtaaacaaaacaatgtagcacaatcctacaaatttggtaaacgctccattactggcaactgcaggaactcaaggacctgaacaagtacaacatccttgctccctgctaccatcaccctgaaattcaagaattagagttcaagaacagcagcttgccatcaagttttagaaagctaggtgagacagagaagcgatttccagtgagaaagcgaatggctggccgctcttggcctctccgtgctcctgtgactcgtggacgcatgacgatgtggcctgaacttggtggtagatcactcccctgcacggtgtgtaaattggagtggtagtttaatatgtctcaaatttcatcattttgattttgtagatcaaacatttagctgtgtttcgttccaaattattagaattcgggtgcctaatttcgtcaacagataaaacattttgtttcatgtgtttaacaaatcaacatttccatgtacttgtagagcgacgaacttgctaatgcatggctggatgatgaagatgtaagagctgccattcacgcggaaccggtatgatagacgaggaaccaaaggtttcattttgaatttatcttaaaatttacacctcactttcttctctttgtggggaactaccttgttaaaatggcacatcagaaaagcttaattgggtcatgggaactgtatactgcaagaatagagtactaccatgatactggagacagcatggtgaagtaccacaagaagttcacagccatgggatatcgcgcacttatttacaggtatgcaacagaccattaagattgtaatttgaaaattgagtgatttaaagtgctaaattcctataaaaaaagctacacattaaattaaattaaattcctattaataaccttggtgcagaatgccagaatttttagctacaaataacaaatagtactacaattattgctcatttggattgaaaataattggagtaccaagttgggttgtttggaatccaacttatatgggttagggattatcaacggtttctgaaccttgcttcagcctaagaggcccagggtttcctaaaccgctcgggccggggttaccgcgctccgacggtaagtaaggttaccgcgcggtaaccgtgaaaaaccgtacaaaaccgtgcaaaatttatcaaaaattcaaattattttttaaatttatttgaatttaaggaggttaccgcggtatttatattaccgtaccccgcggtaagcccaataaccgcggtaaccgcgcggttaccgtcggtttgggaaaccctgaagaggcctaaaattcaaatttgtgcttgtctttgaaaaaaataaaatgagaaccaactactgatcattctgttttttgtagtggagatcatgatctctgtattccctatgtcggaacggaagcatgggttagatccatgggataccgagtaattgatcattggcgaccatggtactttggagggcaagtcgctgggtatgttctcatcctttcttcataggaatcatcagttcttcatataccttttcaggagttatgtcacatctagatattagctcagttcagcttaactcatacttttctacctagaattttagaagtatatgtgcagattgtagataagacttctgtttacatttttttacttgaggaagcaagaaattaagagagaatgtcttgacaagttttcctcactagagcgatattgccattgcagatatacacaaggttatgaacacaatctcactttcctcaccataaaggtaagtgaccagatttcttttccagtagataagctgcatgttctgtaccaaaaggatgttgctcactcaacatgtgtttttttttttttctttagcaaacactggacggttttcagtcatgcattagcaagttcaggctaaaccacaactgtctaaacaaacaatccattggaatgaacacatctattttcgcttgtggttagcttttgaagctgtactatttgatgatgttaacaacatgtgccgacgtttcagggagctggacacactgtcccggagtacaagcccaaggagacgcttgcgttctatagccactggttgtccgggaagaagatttgacatcaagatcaactcgtcgtaacagttttgagcctccgaatgaaaaaaaaaagttgtaatctgtaatctcaacaggcagacaagtgcatttgtccgtaatctgcatctagggatgtgagcagtcccagtactacccccataaaaaccttcctgataatttatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0321700, RefSeq:Os04g0321700