Difference between revisions of "Os04g0345400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0345400| Description = Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein| Version = NM_001059045.1 GI...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0345400|
 
GeneName = Os04g0345400|

Revision as of 19:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0345400

Description

Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein

Version

NM_001059045.1 GI:115457819 GeneID:4335529

Length

3259 bp

Definition

Oryza sativa Japonica Group Os04g0345400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16442608..16445866

Sequence Coding Region

16442626..16442869,16443358..16443736,16443973..16444191,16444289..16444424,16444947..16445192
,16445478..16445768

Expression

GEO Profiles:Os04g0345400

Genome Context

<gbrowseImage1> name=NC_008397:16442608..16445866 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16442608..16445866 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcagagagccaagaggctcaagatgaaggtccgcacactattctggacttccaatgatgtggttgtaaggatgaacttagtggatgcagtccaacgtctaggaattggtcacctcttcaaagatgagataaggcgcacactaaatgatatacaccaaagtgaatttactagctctagcctccatgaggttgctcttcggtttcgcttgcttagggagcacggcttatgggtatctccagttacattcaacaaattcaaaggtgacgatgggaggttcatgaatggaatagctgatgaaccaaggggtttattaagtttatacaatgcagcttacctccttgttcatgatgagccagaactcgaagaggcaatctctttttctaggtaccatctaaaatcaatgatgcagggcaataacctcaaacaccctttatctgaccaagtcaagcgtgcccttaacacaccattaccaaggacatccaaaagaacagagacattgcattatctttcggagtatggacaagaggaagggcatatgtcaattcttttggatcttgcaaaggtggaatttaaccttctgcagggggtccacttgaaggagctcaaagctatttctgagtggtggagagaccttaatgaacatgtggagctaagttatcttagggatcgtgtggtggagagctatacatgttcacacatgttgttctatgaagaaggcttagcattcacacggataacttttaccaagataattgtactaattattatgatggatgatacatatgattcccatgctaccatccaggaatgcaggaagctaaatgaagccatacaaagatggaatgagagtgccgtctctgtcctaccagagtacctaaaaaatttttaccataaattgttgaataattttaaggagtttgagaatcaagtggtggttagtgagaagtaccgggttgctcatgctaaaaaagagtttcaaatactgtcccattattttctccaggaagctgaatggtcacataataattacaagccaagttttgaagagcagttggctttatctacaaagacttcaacggtgcaactattatgtgtgtctactacggtcggccggggtgatgcaataacaaatgaagcattcatgtgggcagctagcagtactaccgtgacatcatgtgcaaagataatgcgtttcatgaatgacattgcttcatttgagcgtgggaagaacaaaggggaaattgcgagcaccgttgagtgctacatgaatgagcacaacatcataagtgaggtggcctttgccaaactcgattcactggtagaagatgaatggagaaccatcaaccaagcccgttgtgaacatcatcagctactcccggtagtgcaacgagttgtgaacttggctatttgtataatgttcttttatgacaagagaaaggatgcgtacacattctccacacatctacaagagattgttaggaatcttttcatcaatcccattaccatgtag</cdnaseq>

Protein Sequence

<aaseq>MRQRAKRLKMKVRTLFWTSNDVVVRMNLVDAVQRLGIGHLFKDE IRRTLNDIHQSEFTSSSLHEVALRFRLLREHGLWVSPVTFNKFKGDDGRFMNGIADEP RGLLSLYNAAYLLVHDEPELEEAISFSRYHLKSMMQGNNLKHPLSDQVKRALNTPLPR TSKRTETLHYLSEYGQEEGHMSILLDLAKVEFNLLQGVHLKELKAISEWWRDLNEHVE LSYLRDRVVESYTCSHMLFYEEGLAFTRITFTKIIVLIIMMDDTYDSHATIQECRKLN EAIQRWNESAVSVLPEYLKNFYHKLLNNFKEFENQVVVSEKYRVAHAKKEFQILSHYF LQEAEWSHNNYKPSFEEQLALSTKTSTVQLLCVSTTVGRGDAITNEAFMWAASSTTVT SCAKIMRFMNDIASFERGKNKGEIASTVECYMNEHNIISEVAFAKLDSLVEDEWRTIN QARCEHHQLLPVVQRVVNLAICIMFFYDKRKDAYTFSTHLQEIVRNLFINPITM</aaseq>

Gene Sequence

<dnaseqindica>19..262#751..1129#1366..1584#1682..1817#2340..2585#2871..3161#cagagatcagaggaatggatgaggcagagagccaagaggctcaagatgaaggtccgcacactattctggacttccaatgatgtggttgtaaggatgaacttagtggatgcagtccaacgtctaggaattggtcacctcttcaaagatgagataaggcgcacactaaatgatatacaccaaagtgaatttactagctctagcctccatgaggttgctcttcggtttcgcttgcttagggagcacggcttatgggtatctccaggtatctattgttctatagagtggacttaaactaatgttgatatagcttattactttttatgctcattatccatttggtaatgaaatttgaattgcatttaataattgttggtcggaaaattctatacagctttagagacaaactttattttttaactatacattaatagtgataacacatgtagaatctttaagtttctccacgtttgatttttctattgtcaacgaaaaaatcataataggttaaagctaaggctgtgtttagatccaaagtttggatccaaacttcagtacttttccatcacatcaacctgtcatacacacacaacttttcagtcacatcatctctaatttcaaccaaaatccaaactttgcgctggactaaacacagcctaagaaagaaattttggttcttctctgtacaagagaaggctagtcacagacacatctcaaactaattagttacaaattaaatattttgtcttgcagttacattcaacaaattcaaaggtgacgatgggaggttcatgaatggaatagctgatgaaccaaggggtttattaagtttatacaatgcagcttacctccttgttcatgatgagccagaactcgaagaggcaatctctttttctaggtaccatctaaaatcaatgatgcagggcaataacctcaaacaccctttatctgaccaagtcaagcgtgcccttaacacaccattaccaaggacatccaaaagaacagagacattgcattatctttcggagtatggacaagaggaagggcatatgtcaattcttttggatcttgcaaaggtggaatttaaccttctgcagggggtccacttgaaggagctcaaagctatttctgagtacgtgtgcctctttgatatataccaaactaacaacaaaagtactacaacagtatatattcatatcaatcttaatacagcttcatacactcatacatatatatgtaaatgatgtactaaacaaacatgtctgataaatgtacaatatccggaagagctctttgcaatattaattagtaccagtaataatcttaaatatactatctaagcatgcacctaaaatgcttttattttaggtggtggagagaccttaatgaacatgtggagctaagttatcttagggatcgtgtggtggagagctatacatgttcacacatgttgttctatgaagaaggcttagcattcacacggataacttttaccaagataattgtactaattattatgatggatgatacatatgattcccatgctaccatccaggaatgcaggaagctaaatgaagccatacaaaggttttgtctttgtcttagtgtatgctgacataaactaatttatatatacttgcctgactaattccgatgtaaagttaacaatttgcctgccttgcagatggaatgagagtgccgtctctgtcctaccagagtacctaaaaaatttttaccataaattgttgaataattttaaggagtttgagaatcaagtggtggttagtgagaagtaccgggttgctcatgctaaaaaagaggtacaacagcgatataactatgttgggactgattccttatttgtttatttgattttcagccaacttaggttttcaaatttgactattatgtttcataaatttccatcaatatgtgatgataaaattgtcatgactttcacagcaacaaatatgatggcataattttcatactagacttttttttcagtaatgatcaacattagttgacaacatgaattctatgaagtcaagtaaaaaaatagaggtggaaagcatcagtggtgttgtggtgaagttttggttgcatcattccacccaccagattgatggctcaactcttcataccaatgaatattatgcaaaagcgggtgctcttttcaaaagaattttatgatgctagggagtggtcactggtctcggtctctttgagtgcatgttgggttgaatatttgcgggtgtgtgagtgtggtttggaaaatcaaagcaacaatattaccatgttttgttaaccttttgttatgaatttctttttcttgggcacagtttcaaatactgtcccattattttctccaggaagctgaatggtcacataataattacaagccaagttttgaagagcagttggctttatctacaaagacttcaacggtgcaactattatgtgtgtctactacggtcggccggggtgatgcaataacaaatgaagcattcatgtgggcagctagcagtactaccgtgacatcatgtgcaaagataatgcgtttcatgaatgacattgcttcatttgaggtacaatttaattaattaaacttgttcttattaaatgtaatttttcaatgcccagaacaacattgttcctgagtggccacagtatttgttcaagctcatcattatagagaaacggtaaattttcacacaagtaaaagaaaaacatggtgctcaacatatgactatatgctactatccatgattcccttaacaactactctataacaatgtactttataactttttacattgttaaattatgggtggaaggtgagaaattataatttatctttgacattcatacagcgtgggaagaacaaaggggaaattgcgagcaccgttgagtgctacatgaatgagcacaacatcataagtgaggtggcctttgccaaactcgattcactggtagaagatgaatggagaaccatcaaccaagcccgttgtgaacatcatcagctactcccggtagtgcaacgagttgtgaacttggctatttgtataatgttcttttatgacaagagaaaggatgcgtacacattctccacacatctacaagagattgttaggaatcttttcatcaatcccattaccatgtagttccccttttagactgtattgtcaaatattatctatttttttttctttttacttttggagggatagatgaaacaaaatctatattgtatgattttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0345400, RefSeq:Os04g0345400