Difference between revisions of "Os04g0352400"

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(Created page with "{{JaponicaGene| GeneName = Os04g0352400| Description = Peptidylprolyl isomerase, FKBP-type domain containing protein| Version = NM_001059070.2 GI:297602522 GeneID:4335556| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0352400|
 
GeneName = Os04g0352400|

Revision as of 19:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0352400

Description

Peptidylprolyl isomerase, FKBP-type domain containing protein

Version

NM_001059070.2 GI:297602522 GeneID:4335556

Length

4124 bp

Definition

Oryza sativa Japonica Group Os04g0352400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16834826..16838949

Sequence Coding Region

16835200..16835253,16835351..16835471,16835554..16835681,16836263..16836409,16836488..16836613
,16836701..16836966,16837065..16837259,16837383..16837463,16837562..16837636
,16838076..16838336,16838439..16838525,16838650..16838866

Expression

GEO Profiles:Os04g0352400

Genome Context

<gbrowseImage1> name=NC_008397:16834826..16838949 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16834826..16838949 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgacgcgtacgacgacctcccaatggccggcgcggaggaggaggtggacgacgtgatgaaggacgagctcgacgaggagggggactcctcctcccccgtggcaatgaaggtcggggaggagaaggagatcgggaagcaggggctcaggaagaggctcctcaaggaaggggaaggatgggatcgccccgaatccggcgacgaggtccaagttcactacaccggcactctcctcgacggaaccaagttcgattccagccgcgatcgtggaacccccttcaaattcagcctcggccaaggggaggtgatcaaggggtgggatgagggtatcaagacgatgaagaagggggagcaggcggtgttcaccgttccgccggagctcgcctacggcgaggccggctcgccgccggcgatcccgcccaacgccacgctgcggttcgacgtcgagctgctctcctgggccagcgtcaaggacatctgcaaggacggcggaatcttcaagaaggtgctcgccgagggacacaagtgggagaatcccaaggacctcgacgaggtgctcgtcaagtacgaagcgaggctcgaagacggaactgtggtatcgaaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaaggctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgctaccctgtacgtcgatcttgagttgctctcctggaagacggtcactctgatcggcgacgataagcgcatcctgaagaaagtcctcaaggaaggggagggctatgagcgccctaacgatggagcagtagttagagtgagatttatcggcaagttggaggacggcactgtgttttccaagaaagggcatgatggtgatgagccatttgagttcaggacagatgaggagcaagtcatcgaagggctggacagaactgtggtcaccatgaagaaaggagaggttgcattggtgagattaccacctcaacatgctttcggatccactgagactaagcaggatcttgctgttgttcctgcaaactccacagtctggtatgaagttgagcttgtctcattcgagaaggagaaagaatcatgggatttgaaggacaatgctgagaagattgaagcagctgccaagaagaaagatgaagggaatgtgtggttcaagatgggcaagtatgctaaggcctccaagagatacgaaaaggctgcgaagtacatcgagtatgacagctccttcactgatgatgagaagaagcaatcgaaagcactcaaggttagttgcaagctcaacaatgctgcttgcaaactgaagctgaaggaatacagggaagcagagaagctctgcaccaaggttttggaactggagagcacaaatgtaaaggccttgtacagaaggacgcaggcatacattgagcttgctgatctggaactagcagagttggatgtcaagaaagcactggagattgatcctgacaacagggatgtgaagatggtgtataagacattgaaggagaagatcaaggagtacaacaagagagacgccaagttctacggcaacatgttcgcgaaatggaggaagctggaacacatggagaacaagaaggtgcctgggaagcaggaggcacagcctatggccattgacagtgccgcttga</cdnaseq>

Protein Sequence

<aaseq>MADDAYDDLPMAGAEEEVDDVMKDELDEEGDSSSPVAMKVGEEK EIGKQGLRKRLLKEGEGWDRPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQG EVIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVELLSWASVKD ICKDGGIFKKVLAEGHKWENPKDLDEVLVKYEARLEDGTVVSKSDGVEFAVKDGYFCP ALSKAVKTMKKGEKVLLTVKPQYGFGEQGKPASGAEAAVPPNATLYVDLELLSWKTVT LIGDDKRILKKVLKEGEGYERPNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTD EEQVIEGLDRTVVTMKKGEVALVRLPPQHAFGSTETKQDLAVVPANSTVWYEVELVSF EKEKESWDLKDNAEKIEAAAKKKDEGNVWFKMGKYAKASKRYEKAAKYIEYDSSFTDD EKKQSKALKVSCKLNNAACKLKLKEYREAEKLCTKVLELESTNVKALYRRTQAYIELA DLELAELDVKKALEIDPDNRDVKMVYKTLKEKIKEYNKRDAKFYGNMFAKWRKLEHME NKKVPGKQEAQPMAIDSAA</aaseq>

Gene Sequence

<dnaseqindica>3697..3750#3479..3599#3269..3396#2541..2687#2337..2462#1984..2249#1691..1885#1487..1567#1314..1388#614..874#425..511#84..300#cctcgcctcccttccctcgctcttcccaagtcacagctacgcacgcacgcacgcgcaccacgaaccagcacgcgcaccacccaatggcggacgacgcgtacgacgacctcccaatggccggcgcggaggaggaggtggacgacgtgatgaaggacgagctcgacgaggagggggactcctcctcccccgtggcaatgaaggtcggggaggagaaggagatcgggaagcaggggctcaggaagaggctcctcaaggaaggggaaggatgggatcgccccgaatccggcgacgaggtccaaggttagtaggcgcccaccatgcctgtgattcttcatcctcccgttgattcgaatcacacgaatccattcaagcacgcagagcgttgaataattcgaatttttttgtttgtttttgtttatttcagttcactacaccggcactctcctcgacggaaccaagttcgattccagccgcgatcgtggaacccccttcaaattcagcctcggccaaggtgcggatcggattcccagtttccccccacatttcgtcgcaatattcaccatagttgaattgaattgccgaatcgtactgaatttttttgaaaaatctgcaggggaggtgatcaaggggtgggatgagggtatcaagacgatgaagaagggggagcaggcggtgttcaccgttccgccggagctcgcctacggcgaggccggctcgccgccggcgatcccgcccaacgccacgctgcggttcgacgtcgagctgctctcctgggccagcgtcaaggacatctgcaaggacggcggaatcttcaagaaggtgctcgccgagggacacaagtgggagaatcccaaggacctcgacgaggtgctcggtacgtttcaaaattttgttcgaacgaaatctcaagtcgaaacgagaatcaggagaaaattttcaaatgagaagaccattttagcattattgtgatcattttaaattcagttcaacacagcaaatagtaacatatggggtatgatgaatttctatgaaattcaggaagatggcaagtttctgaaaatttcaaattggaagactattttagatttttgttcttctcattttaaagtccgtgaaacaaagtgagacagtaagataaggggcagaaggaatttctacaaaattaaagaaaaatataggcgaatttcgaaattgcatacactgattggtggtttggtaaattggtatccatcagtgaaaattctcttatactgaaatggttgctaaactttttttttgaaagaatggttgcaaaacttgttctctatttgcagtcaagtacgaagcgaggctcgaagacggaactgtggtatcgaaatctgacggtgttgagtttgctgtcaaagatggtttgtatcccctgcatcattgagcctctgcaattcagaatttaaccctgaaaaatgccatgtcactctccgatgaacataattctgtttatcttcaggctatttctgcccggcgctttcaaaggctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatgtgagtcaatcggagtcctcctttcaagagattttgcaactaatctatgtctttggtggtaatgttctgatgatcttggaaatggcattgttgagtgctgacatgcacttttctgatctgtagatggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgctaccctgtacgtcgatcttgagttgctctcctggaagacggtcactctgatcggcgacgataagcgcatcctgaagaaagtcctcaaggaaggggagggctatgagcgccctaacgatggagcagtagttagaggtgtgtgctgctgctgctaattcttgcatttgttatggttctattgtacctgcacacttgcaatgtgttcaagaacatggtttgttgtgcttttgcagtgagatttatcggcaagttggaggacggcactgtgttttccaagaaagggcatgatggtgatgagccatttgagttcaggacagatgaggagcaagtcatcgaagggctggacagaactgtggtcaccatgaagaaaggagaggttgcattggtgagattaccacctcaacatgctttcggatccactgagactaagcaggatcttgctgttgttcctgcaaactccacagtctggtatgaagttgagcttgtctcattcgagaaggtaatccatcaactcctcgttgtttgtttacctgtctcttgattttggttgagctgaaagtgattaaaaattctggatttcgctcaggagaaagaatcatgggatttgaaggacaatgctgagaagattgaagcagctgccaagaagaaagatgaagggaatgtgtggttcaagatgggcaagtatgctaaggcctccaagagatacgaaaaggtaaaaaattaaaatctgaacctaaaataaattctaaatttatttgcttaatacttcatattttttgctcttgattaggctgcgaagtacatcgagtatgacagctccttcactgatgatgagaagaagcaatcgaaagcactcaaggttagttgcaagctcaacaatgctgcttgcaaactgaagctgaaggaatacagggaagcagagaagctctgcaccaaggtactgtacgagttcttggtgtttgtcttgttaatgtagaggttcttaactgacaatgtaaaaacaagagtaaaatacaccagcggtccttaaacttgtcagcaggtttcacttaggtccacgaacttgtaaagcgcacatcaaggtccctaaacttggtttattgtatcattccggtccaaagccgtgtttgaccgtggtcttgtctacgtggcacgtcacgtggatgatgacatggatttttttttatattttttctcccttattctttctcttttctcttttatgaaaagacgatgacatggacgatgacgtgcatgaggcattttcatcttttcgacaaggaagaaagagaaaaaaagaaagaagaagggagaaaaaataaaaaaaatctatgtcatcgttcacttggcgtgcacgtaggcaagaccacggttaaacgcggctttggaccaggatgatacaataaaccaagtttagggcccttaatgtgcactttgcaagttcgtggacctaagtgaaacctgctgacaagtttaaggaccgctggtgtattttactcaaaaaacaatgctgtgcaggttttggaactggagagcacaaatgtaaaggccttgtacagaaggacgcaggcatacattgagcttgctgatctggaactagcagagttggatgtcaagaaagcactggagattgatcctgacaacaggtgaagctcaagttcatcagaacatgttaaataccaccatatctccataatttgtgactcactgttgctgttctcttctcagggatgtgaagatggtgtataagacattgaaggagaagatcaaggagtacaacaagagagacgccaagttctacggcaacatgttcgcgaaatggaggaagctggaacacatggagaacaaggtaggttaatctgccactattgagcgtcttccggccacacttacctcagctcagatgcgcttgtttctcaccattgttgcttgttgaactgctgcagaaggtgcctgggaagcaggaggcacagcctatggccattgacagtgccgcttgaggattagctctgctttcttttttctgaacctggttactgctagtactactgtctctactggttgtatgagtatgaaatatgaatggaaaatggtagttaatttgccctttgcttgatagttgcagtctttgcaactctgcacccatatgtgctcagctttgtacgagaagtggttgccgtcatttgaagatgtgatgctgtgattgtattgtggtgttagaagagcaaaaatgccataacgacactttggactgcgctactaatgttgttctttcttgtttctattgcaatatggtataacatctgtgccttgtacgcaggacgtatgtcccgacattgtttgtttgtttatgagaagattgtgagactgaact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0352400, RefSeq:Os04g0352400