Difference between revisions of "Os04g0373400"

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(Created page with "{{JaponicaGene| GeneName = Os04g0373400| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001059108.2 GI:297602569 GeneID:4335602| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0373400|
 
GeneName = Os04g0373400|

Revision as of 19:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0373400

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001059108.2 GI:297602569 GeneID:4335602

Length

3803 bp

Definition

Oryza sativa Japonica Group Os04g0373400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18233933..18237735

Sequence Coding Region

18234041..18234301,18234787..18235335

Expression

GEO Profiles:Os04g0373400

Genome Context

<gbrowseImage1> name=NC_008397:18233933..18237735 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18233933..18237735 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccaccaagcatggaggagcctcttcttggaggcggcaatggcgaggagaagaaaggagggagctcgaggctagcggtggtggccgaggtgaggaagcagctgtacctcgccgggccgctcatcgccgggtggctgctgcagaacgtggtgcagatgatctccgtcatgttcgtcggccacctcggcgagctcgagctctccagcgcctccatcgccacctccttcgccggcgtcaccggcttcagcctcctggctggcatggcgagcagcctggacacgctgtgcgggcaggcgttcggggcgaagcagcaccggctcgtgggcgtgtacaagcagcgcgccatggtggtgctcggcctcgccagcgtgtgcgtcgccgcggtctgggcctacaccggcgagctcctcctgctgttcgggcaggacccggagatcgcggcggcggcggggagctacatccggtggatgatcccggcgctgctggcgtacgggcccctgcagtgccacgtccggttcctgcagacgcagaacgccgtgatgccggtgatgctcagctccggcgccgccgcggcgtgccacctgccggtgtgctggctgctggtgtacggcgccgggctcggcagcaagggcgccgcgctcgccaacgccgtcgcctacctcgccaacgccgccgccctggccgcctacgtcaggctgtcgccagcgtgccggagcacgtggacggggttctcgtcggaggcgttccacgacttggtcggcttcatgaggctcgctgttccttctgctctcatggtctggtaa</cdnaseq>

Protein Sequence

<aaseq>MAAPPSMEEPLLGGGNGEEKKGGSSRLAVVAEVRKQLYLAGPLI AGWLLQNVVQMISVMFVGHLGELELSSASIATSFAGVTGFSLLAGMASSLDTLCGQAF GAKQHRLVGVYKQRAMVVLGLASVCVAAVWAYTGELLLLFGQDPEIAAAAGSYIRWMI PALLAYGPLQCHVRFLQTQNAVMPVMLSSGAAAACHLPVCWLLVYGAGLGSKGAALAN AVAYLANAAALAAYVRLSPACRSTWTGFSSEAFHDLVGFMRLAVPSALMVW</aaseq>

Gene Sequence

<dnaseqindica>109..369#855..1403#tcacaaccttcagtaagtagttcacctcatctgtaattgtaaacacactcatctttctgtttgaagttgagaagcagagcaagaagctaagcttgggggggcgtggccatggcggcgccaccaagcatggaggagcctcttcttggaggcggcaatggcgaggagaagaaaggagggagctcgaggctagcggtggtggccgaggtgaggaagcagctgtacctcgccgggccgctcatcgccgggtggctgctgcagaacgtggtgcagatgatctccgtcatgttcgtcggccacctcggcgagctcgagctctccagcgcctccatcgccacctccttcgccggcgtcaccggcttcagcctcctggtacacacaccagcccttcctcaaatatacggttcttcagaaagtaactcgagatatctaaactttacactaagttttttggagtatctgaagatatcaaattttatatttcaaaatttggtacttcttaataccttctataaaattacctaacatcgaaacctaatattcattcctgacatgatattgaattcgctccccatcttggtacgtgttcgatctgttcatcatccatggtatgatggcatgatatcttgagaaagtaccttgaagcacttaaattttacactaaaatttttatttcctcaatatacttaatacatggagttatcaaattttatattcgaaatcttctcgataccttgagctcaaagatgataaaattacccatccccaaaacctcatcttcattcccaacaacataatattgaatttcgttgacatcttggtacgtgttcgatccggttcatcgtcaattggtataggctggcatggcgagcagcctggacacgctgtgcgggcaggcgttcggggcgaagcagcaccggctcgtgggcgtgtacaagcagcgcgccatggtggtgctcggcctcgccagcgtgtgcgtcgccgcggtctgggcctacaccggcgagctcctcctgctgttcgggcaggacccggagatcgcggcggcggcggggagctacatccggtggatgatcccggcgctgctggcgtacgggcccctgcagtgccacgtccggttcctgcagacgcagaacgccgtgatgccggtgatgctcagctccggcgccgccgcggcgtgccacctgccggtgtgctggctgctggtgtacggcgccgggctcggcagcaagggcgccgcgctcgccaacgccgtcgcctacctcgccaacgccgccgccctggccgcctacgtcaggctgtcgccagcgtgccggagcacgtggacggggttctcgtcggaggcgttccacgacttggtcggcttcatgaggctcgctgttccttctgctctcatggtctggtaagtttcttttacttaaaaaaataaattttatagtactttttttttattacacgatagatgtacacgcgcacacaacactcaacacgcaacacacacacacaaaaggagagattcggaggtagagatgttcttcaaactatttttaagaaggaattgtaagcaggttgggggctaaacatgggacctcagaattgaaaccacacatcccttaccaattaccactgtattatcaagtgcatctctaagcacataacaccatactcacgaaattttatagtacttgagaaaatacctatggatatcaaaattttggactgaaaaatttagtaacaggagatatcaggttttataggagtattagaaaatatgatacattttggtaccttgttaagaacggtaaaattactctaagaaaactattgtgctagtcactctgagttcaggtaaatttcgttgtctcatgtcgaatttagctgaaatttgcatgttttgtagcttggagtggtggtcgtttgagctccttgtgctgctctccggactactcccaaatccgaagctggaagcatcagtattgtccatttggtgagtgatgttttcatgatttggtcacacattctgcatccagtttgcctcctctgatcgtgtaccactgaatttcctgcagcctgaactcgggttccttggcattcatgatccctttcggccttggttcagccataaggtcagatatattgatcaaatcaaacaccttatcataaacattgctttcaatttattgtttttcttttcatcaaaacaactgttcatgaacttttacaatgacaaattaacgacatcacaatgccctgttcttcgtgatctctctcagcacccgggtctcgaatgagctcggcgccggtcgacccgaggcggcccgtctggccagccgtgtggtgatggcgctgggtctcgtcgtcggcgtcgcgatcgggctcgccatgatcctggtgcgccatctatggggttacgcgtacagcaacgaggaggaggtggtccagtacgtcgcgaagatgatgcccattcttgccgtctcgttcctcttcgatgacctgcagtgtgttctgtcaggtcagatgatcgatgctcgatctcaaccaaaaaaattgaaaacaaaatgcatgtgattgagagactattgtctgagttttttcacgcgttaatcggttcttttcatatccatctatttatgattgatttgtatatatggttgttaacaaacatattatccccaagaaaatgactgacagtgagggattcttcaggtgttgcaagaggctgtgggtggcaaaagattggtgccattgttaaccttggagcgtactacctcgtcggaattccagcggcgctgtgtttcgccttcgtctaccatcttggtggcatggtaattctactgctcacataagagaaagcattacctcaattctgtcaacattttggttggctatttcttagatatgggacctggaatataagttttcatataatctttggccgtgtatattcacttatggatacagaggcttgattactatccattatctaaaagaaatcggtctctgttttgagcagaagaaattgacctctgaacaatatatatgcttccaaacttgcagggactgtggttagggataatgtgtgcactcatcgttcagatgctgttgcttctagccataacagtgtgcactaattgggagaaagaagtaagcaaaatcattcagaacttcttgcatgcgtcacatgtatactgttattttttctgtcagcttgtcattacggtttcttgatgatgtggcctgtttttgtcttgtgtctttccataggctctgaaggccaaggagagagttttcagttcgtccttgcccgcagacatgacatgataatacaatgtacacgatccaagaaccaagatgaagatcgatggacgattttgtttggcaatagtggccaagaaattctacgagacaatgggaaattacagcttgagaaattaagaccgtcatctctatgttttgatgacacaattaatagtcgccaaaacaaggaactatctgcaaggaagagttcagacagcgagaaatctgcttttggtggattttttgtcagacgaagaaataaaatgttatggactagagacgctgcattggatacaataatgaattgaaatgttcagttaactatatgtaatggatgttaggatttcgacaatgacactattttggctctactattgattagatgattaattatattgtaagtattatgtgacatgcgccattgagtcatgattcatgataccttttctcctaaacgaaatacatcttcttttgcttgtaaatatgcaaatataaagttttttttttct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0373400, RefSeq:Os04g0373400