Difference between revisions of "Os04g0405100"

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(Created page with "{{JaponicaGene| GeneName = Os04g0405100| Description = Sterile alpha motif SAM domain containing protein| Version = NM_001059243.1 GI:115458215 GeneID:4335748| Length = 25...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0405100|
 
GeneName = Os04g0405100|

Revision as of 19:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0405100

Description

Sterile alpha motif SAM domain containing protein

Version

NM_001059243.1 GI:115458215 GeneID:4335748

Length

2522 bp

Definition

Oryza sativa Japonica Group Os04g0405100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20121353..20123874

Sequence Coding Region

20121353..20121462,20121562..20121650,20121816..20121964,20122217..20122358,20122946..20123061
,20123557..20123874

Expression

GEO Profiles:Os04g0405100

Genome Context

<gbrowseImage1> name=NC_008397:20121353..20123874 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20121353..20123874 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagggatggggcagcagaagaggcggccgctggtggtgatggcgtcggcgcaggcggcggcgcggggtggggccaacccgctcgcggagctgaccgaccgcgtcaagaccctggaggccggcctgcgggcgtggctggcgaagcagcccacgcacgtcgaggccgccgtcgccaccgccgtcggggccgtgcagggcggcgccctcggcgggctgatgggcacgctcgcgccggacggcgggtcgccgttccccgtgccgcagccgccgcccggggccgaccccaacgccctcgcctccttcaagcaggcgcaggctttggcaggtggaccactggtgcaagcccgaaactttgccgtcatgactggtgctaatgcaggaatatcttgtgttatgagaaggataagaggagtggaggatgtccagggcagtgctcatttcgatagcatggcagcagcgtttggttctggcgctttattctccattgtgagtggaatggggtctccaaatccagttgctaatgcaattacaactggtgtagcttttgcagtatttcaaggtggttttttcatgattggtcagaaattttcgcagccaccgagtgaagatatatactattcccgtgggagaaatatgttgaaacaattagggcttcagaactatgagaagaatttcaagaagggtcttcttactgatcaaacattgcccctactcaatgacagtgcacttagagatgtgaagatcccccctggtcccagacttctcatccttgatcacattcaaaggtttggaacagctgtacaaatttctgcctgttggcaccagcttttcctcaagttgcataaaatcgtgttcttggaagtacaatctagctatttcaaggatgagctctttaggcagaagtgtgattggaaaagatag</cdnaseq>

Protein Sequence

<aaseq>MEGMGQQKRRPLVVMASAQAAARGGANPLAELTDRVKTLEAGLR AWLAKQPTHVEAAVATAVGAVQGGALGGLMGTLAPDGGSPFPVPQPPPGADPNALASF KQAQALAGGPLVQARNFAVMTGANAGISCVMRRIRGVEDVQGSAHFDSMAAAFGSGAL FSIVSGMGSPNPVANAITTGVAFAVFQGGFFMIGQKFSQPPSEDIYYSRGRNMLKQLG LQNYEKNFKKGLLTDQTLPLLNDSALRDVKIPPGPRLLILDHIQRFGTAVQISACWHQ LFLKLHKIVFLEVQSSYFKDELFRQKCDWKR</aaseq>

Gene Sequence

<dnaseqindica>2413..2522#2225..2313#1911..2059#1517..1658#814..929#1..318#atggaagggatggggcagcagaagaggcggccgctggtggtgatggcgtcggcgcaggcggcggcgcggggtggggccaacccgctcgcggagctgaccgaccgcgtcaagaccctggaggccggcctgcgggcgtggctggcgaagcagcccacgcacgtcgaggccgccgtcgccaccgccgtcggggccgtgcagggcggcgccctcggcgggctgatgggcacgctcgcgccggacggcgggtcgccgttccccgtgccgcagccgccgcccggggccgaccccaacgccctcgcctccttcaagcaggcgcaggtctcgtcttcttcctatactatacatctcgtagttatacagtatactcaataataataggaataataggggcgcagtaaacaaatttaatatttcttggatgcttgttgaggattatagtagaatataaagcgaccaaacatttcttgataaagcaccgacggtaactggttatctggtatgcatcgacaatgtcggggttcttttgttcaaatttgagaataatgatgcaattcccgaaggaagcaaactttattaaagaaaaggaagatgggtgctttttgtatgcatgtggtagcattttaagaaagcaaacactctgctttgatttgttttactggtgcaatagtctttattgttcctcaagattgtctgtgtagagctaaaaggtcgcactatatcagtatccttgatgtaaagaactgcaaaggaaccattctgtgttctcctctaagcaatcagaataacgggatcttttttttgtgtgtatttcaggctttggcaggtggaccactggtgcaagcccgaaactttgccgtcatgactggtgctaatgcaggaatatcttgtgttatgagaaggataagaggagtggaggatgtccagggcaggtgagggttcacaagttctattttactgtcatgtaaatactcgttagtagcagcaaagccagtacacttattgcacgaatgcatcttattctgttcatatatactatattccctttctttctttcccacatgtgagttgcttaccagttgtcgatataactactagtttgagtttctaagattttttcttttgtcaaattaatattggtgtaagccactcatgactgactaatattagatgtaagaaacctgaaagccacgtgtctgtgtttttatgaaaaatctacctaagaaattatactgcttaaatcaaaatgagcaagacttgactcactggtgcgagtacattttgtaatcttcaacaaactcaagatagaaacataacaaaagcatctacgggtcttatgataaactttaaatgctttactagttaagaaactaatttataaattagtgctgaaaaccgaaaaagaaatgccgactctatcaccagaagggtatattacaagtttggaaggctgattattgactatctatataaatcgtgttgattacttgatttttttttcacctgcgtgattgacaagtgctcatttcgatagcatggcagcagcgtttggttctggcgctttattctccattgtgagtggaatggggtctccaaatccagttgctaatgcaattacaactggtgtagcttttgcagtatttcaaggtggttttttcatggtaagaatttcaatgtttctctttctaatgaaagccatttttatacaacttgaattatctcaagattttagtactggatgtgagtaccaatttcattagtacttgacattagacatgtgcattgcaactagttgatatttttgtttgatgtcctgtcagtggattaggatttagggcccattggtactatcctttttagcgataaatttgatatcagttgtaattctttttgcctacaaatctattttgtagattggtcagaaattttcgcagccaccgagtgaagatatatactattcccgtgggagaaatatgttgaaacaattagggcttcagaactatgagaagaatttcaagaagggtcttcttactgatcaaacattgcccctactcaatgacaggtatatatattttttattcaatttatttcctacagtagatgaaaaaacataagtatttaaaaaaaatattgatatgccaaaaaattgtccttaccaataataaaattctatatgccaaaaagttgtccttaccaataataaaattctatgtttatattgatccagtgcacttagagatgtgaagatcccccctggtcccagacttctcatccttgatcacattcaaaggtttggaacagctgtacaaatttctggtatgtagcatttagtttcattgatctgatataattttcgtcacacgacttttgcagagaccctgagttaacgaaatcaacttaaatcgattgccacagcctgttggcaccagcttttcctcaagttgcataaaatcgtgttcttggaagtacaatctagctatttcaaggatgagctctttaggcagaagtgtgattggaaaagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0405100, RefSeq:Os04g0405100