Difference between revisions of "Os04g0416500"

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(Created page with "{{JaponicaGene| GeneName = Os04g0416500| Description = Conserved hypothetical protein| Version = NM_001059300.1 GI:115458329 GeneID:4335810| Length = 2573 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0416500|
 
GeneName = Os04g0416500|

Revision as of 19:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0416500

Description

Conserved hypothetical protein

Version

NM_001059300.1 GI:115458329 GeneID:4335810

Length

2573 bp

Definition

Oryza sativa Japonica Group Os04g0416500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20590964..20593536

Sequence Coding Region

20590966..20591435,20591879..20592122,20592206..20593318

Expression

GEO Profiles:Os04g0416500

Genome Context

<gbrowseImage1> name=NC_008397:20590964..20593536 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20590964..20593536 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccgccgtggacagggtcaggagaggggaggcgaagcagcacgacgcgctgcgtggcgcgcaggtggtcagcctccgcgtgtcgtcgttccgcgacatgccgagggaggaggcggagcggcggctcgccgagctccggtgcctcgtgaagagccgcggcgcgcgggtgctcctcgtcgtcgaggacctcaagtgggcggccgacttctgggccgccgcgcacgccggcgccaggagggtcggcagcggcggcggcggcggctactactgctctgtcgagcacgtcgtcaccgaggtgcgcgccctggcgtcgtgcgacggcggcatctggctcgtcgggttcgggacgtaccagacgtacatgaagtgcagggcggggcatccgtcgctggagagcatgtgggggctccagacgctcgccgtccccgccggcagcctcgcgctgagcctcacctgcgccttcgacgacagcgcgctgggcgcagtcaatcagtccatgaaagcgagccctcacaccaccgatgggaaccgcccggcgccgtcttgcgggccgcttttgggcggcagccacctcctctccagatgctgcggcggcgactgctccgccgcgacgacgacgcacgagcacgacaccaaggcgtcgttgccccgctccttcgtgtcgtcgtcgagcctcccttcttggctccagcattgccgcgaccagcagctgcaggagtcgacacatttcgcggatcttggcaagacatggggatccatctgcggcaagccgtctcagcggatgacgctgcatttctcggcgccggtgtcgccggcgtcctccatctcctcctacgagcacggccacggccaccagcagcagcagcaccagcctcaccactcgtggcttctcgccgacctcgacgccaagcacccatggaagcccaagcgcgaggacgacgacgacgagaaggccaagtcgcacgacgactgctccggcgcctccaatggctcggtggaggtggagtgccgttccaggttcaaggagctcaacgccgagaacctgaagctcctgtgcgccgcgctggagaaggaggtgccgtggcagaaggagatcgtcccggaggtggcgagcgccgtcctccagtgcaggtccgggatcgccaagcggcgggacaggtcgaggtcgacggaggcgaaggaggagacgtggctcttcttcctcggaggcgacgggcacggcaaggagagggtggcgagggagctcgccggcctcgtcttcgggtcacgcaagagcttcctctccgtcaagctcggcgcctcctcctcctcgccgtccgcgtcgggctccaccgaggatcaccaccggagcaagcggccgcggacgacgacgacgtcgtcggcgagcgaggcctacctcgagcggctctacgacgccgtctcggagaacccgcaccgcgtcatcctcatcgaggacgtcgagcagggcgaccatcgctggcaggtgggcgtcaaggaggccatcgacagaggggttctccggagccaggccggcgacgaggtcggcgtgggcgacgccatcatcatcctgagctgcgagagcttcgaggcgaggtctagagctggctcgccgctgatgaacaagaagatgaaggtggagaaagaggaagccaacacaagtgatcatgatcacaaattagaaatcgaatcaggcgccccctcttcttgcttcgatttgaaccttgacatggagagcgatcaagcagcagatgagctcagctccggtgatgtctgtctgctcacggcggtcgaccgggtgctgctcttcagaaggcaggatgaaatgtaa</cdnaseq>

Protein Sequence

<aaseq>AAVDRVRRGEAKQHDALRGAQVVSLRVSSFRDMPREEAERRLAE LRCLVKSRGARVLLVVEDLKWAADFWAAAHAGARRVGSGGGGGYYCSVEHVVTEVRAL ASCDGGIWLVGFGTYQTYMKCRAGHPSLESMWGLQTLAVPAGSLALSLTCAFDDSALG AVNQSMKASPHTTDGNRPAPSCGPLLGGSHLLSRCCGGDCSAATTTHEHDTKASLPRS FVSSSSLPSWLQHCRDQQLQESTHFADLGKTWGSICGKPSQRMTLHFSAPVSPASSIS SYEHGHGHQQQQHQPHHSWLLADLDAKHPWKPKREDDDDEKAKSHDDCSGASNGSVEV ECRSRFKELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEA KEETWLFFLGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRS KRPRTTTTSSASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRS QAGDEVGVGDAIIILSCESFEARSRAGSPLMNKKMKVEKEEANTSDHDHKLEIESGAP SSCFDLNLDMESDQAADELSSGDVCLLTAVDRVLLFRRQDEM</aaseq>

Gene Sequence

<dnaseqindica>3..472#916..1159#1243..2355#gcgccgccgtggacagggtcaggagaggggaggcgaagcagcacgacgcgctgcgtggcgcgcaggtggtcagcctccgcgtgtcgtcgttccgcgacatgccgagggaggaggcggagcggcggctcgccgagctccggtgcctcgtgaagagccgcggcgcgcgggtgctcctcgtcgtcgaggacctcaagtgggcggccgacttctgggccgccgcgcacgccggcgccaggagggtcggcagcggcggcggcggcggctactactgctctgtcgagcacgtcgtcaccgaggtgcgcgccctggcgtcgtgcgacggcggcatctggctcgtcgggttcgggacgtaccagacgtacatgaagtgcagggcggggcatccgtcgctggagagcatgtgggggctccagacgctcgccgtccccgccggcagcctcgcgctgagcctcacctgcgccttcgacgacaggtaaaaaatcatccgatcgatctaaaaaaagtttgttaagttctcgcggcgcagcgtgtcacgtcaggtgaacgaatcatgcacccgcgccggccttgcagaaacgaaatgcctctggtctctgtgatctgaccccttcgttactgagcaatcagtaagcatcagtagttcagtaccatgcgggtgaaagcttttgcatcttttgcgtgctttctgggcaaaagctttaggtcaatctatagctcctcatcagcttcacattctctttttctaatatcgcattatttgaacattcacgagagcatgatatatcgacaatacaatttcagaggtacagcggctgacaaagatgatcagtttagctgatcttgtggagacatgtcgatcggtgaggtgacagtgtgtgcaggaatctaatttccgttttgttattctttctgcagcgcgctgggcgcagtcaatcagtccatgaaagcgagccctcacaccaccgatgggaaccgcccggcgccgtcttgcgggccgcttttgggcggcagccacctcctctccagatgctgcggcggcgactgctccgccgcgacgacgacgcacgagcacgacaccaaggcgtcgttgccccgctccttcgtgtcgtcgtcgagcctcccttcttggctccagcattgccgcgaccagcagctgcaggtgccactcgatcgaatgctaatctttttatcttaattaatcggtcaatcattgctgattttttttttgtcttctcgtgataggagtcgacacatttcgcggatcttggcaagacatggggatccatctgcggcaagccgtctcagcggatgacgctgcatttctcggcgccggtgtcgccggcgtcctccatctcctcctacgagcacggccacggccaccagcagcagcagcaccagcctcaccactcgtggcttctcgccgacctcgacgccaagcacccatggaagcccaagcgcgaggacgacgacgacgagaaggccaagtcgcacgacgactgctccggcgcctccaatggctcggtggaggtggagtgccgttccaggttcaaggagctcaacgccgagaacctgaagctcctgtgcgccgcgctggagaaggaggtgccgtggcagaaggagatcgtcccggaggtggcgagcgccgtcctccagtgcaggtccgggatcgccaagcggcgggacaggtcgaggtcgacggaggcgaaggaggagacgtggctcttcttcctcggaggcgacgggcacggcaaggagagggtggcgagggagctcgccggcctcgtcttcgggtcacgcaagagcttcctctccgtcaagctcggcgcctcctcctcctcgccgtccgcgtcgggctccaccgaggatcaccaccggagcaagcggccgcggacgacgacgacgtcgtcggcgagcgaggcctacctcgagcggctctacgacgccgtctcggagaacccgcaccgcgtcatcctcatcgaggacgtcgagcagggcgaccatcgctggcaggtgggcgtcaaggaggccatcgacagaggggttctccggagccaggccggcgacgaggtcggcgtgggcgacgccatcatcatcctgagctgcgagagcttcgaggcgaggtctagagctggctcgccgctgatgaacaagaagatgaaggtggagaaagaggaagccaacacaagtgatcatgatcacaaattagaaatcgaatcaggcgccccctcttcttgcttcgatttgaaccttgacatggagagcgatcaagcagcagatgagctcagctccggtgatgtctgtctgctcacggcggtcgaccgggtgctgctcttcagaaggcaggatgaaatgtaacactagtgtacatgaaggatccatgtttatcagctagggtagctagctcattgctcgtctaattagattttcctttcatttgttttgatggttttttttgtttctagtattaactttggctttagaggatcatggcattggtgcggttggacaatggcatattatgagcttcgttaagatggagctctgttatatatttgtggtggtggtgatcaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0416500, RefSeq:Os04g0416500