Difference between revisions of "Os04g0466700"

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(Created page with "{{JaponicaGene| GeneName = Os04g0466700| Description = Armadillo-like helical domain containing protein| Version = NM_001059568.1 GI:115458865 GeneID:4336098| Length = 788...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0466700|
 
GeneName = Os04g0466700|

Revision as of 19:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0466700

Description

Armadillo-like helical domain containing protein

Version

NM_001059568.1 GI:115458865 GeneID:4336098

Length

7887 bp

Definition

Oryza sativa Japonica Group Os04g0466700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23717435..23725321

Sequence Coding Region

23718101..23718235,23718546..23718869,23719402..23719533,23719611..23719759,23719922..23720056
,23720147..23720281,23720383..23720476,23720585..23720704,23721482..23721568
,23721659..23721772,23721906..23722034,23722352..23722656,23723346..23723409
,23723577..23723723,23724022..23724180,23724434..23724603,23724741..23724863
,23724975..23725047,23725151..23725243

Expression

GEO Profiles:Os04g0466700

Genome Context

<gbrowseImage1> name=NC_008397:23717435..23725321 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23717435..23725321 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggccgaagggcggcgccgcggcgtcctcctcctcgtcgaagaagcccaaggcgaagccgaagcagcgcggcggcgtcgacttcaagaagtacaagcacaaggtggggcggaagctgccgccgccgaagaatgccaccgacacggagatcaagtccagagcgatcgtgctgccggagcagagcatggcgtcggagagggctggcatggccgtgaacaagcgcgggctcacgctgcgggagctcttgcagcagacgggccactacaatgccaatgtgcgccgagctgcgctgaatgggataaaggatcttgttgctaagcatccatcagagcttaaacttcacaaggttgcaattgttgagaagctacaggaaagaatatgtgacactgacaaggtggttcgtgaatccttgttcagtatactgcagtctctcgtcttcccatctttgaaagaggacaatgcaatatcgacacgcagtacactgtttctgctgatggccaatattttgaacggaatgacccatctatccatggatatccagttaatgtctttcagatttttggagcttgttgttattaatttcccatcctcctttccaggatacgctgaacaggtcttcaacaactttcttgctgtactgagcaatgacaggattcatctccaggataagagtaaacttaacagtgtccttagtgggctcgggcagtgtctttctcaggttgcttatgcaacagaaaatggtgatgcatcaaatcgactggttcataatctttctggtagggaactttggaaatgtactcttgatgaagataactcaggaagtagagcatttgcgatgtccaatatattaatgaagcttcaaaacctcttccagattctcgttaattctgtagaggtctcagtttcagaactttttgcaaagtcaactattgatgctcagtcaagtgaagcattattatcagctcttcactgtctggatctaatatgtaacatatgtattcaagaggtaaagaaacctcagatgaaatttggaagatccaaaattcaggttggacctgaatggttgaaaagttccgtgttagtatatgcaaagaaattgtggggagtaaaccgttcattccacgaaaagggagatgacagatattatgttttcaatctgaagattgctgaaatatttttgtgcttgagtgcatgtatggacaacaccatatttccagctgatgaattttgccagtttgtatcttctctacttgcaaaggcaaaaacacttcgcaataaggataccatggaaaagcatttgagcccacttataactttcataccagatcttgtatccaatgccccagatgactcaaaaggatatttattagaggcatttacagatgcattctgggattgcaaggtggattgcaagctgattttcccatatttggatgcagtgggaaaaatgctgtttcctgaaaaaacaggaatattatttgtggaaaatgattcaggctctgaataccatggtgtgtgggtaaaagagctacctggaattctactacaatcaattgacaaagccccctcagtaacaaaggttgttttggagctacttctaagaattggacagtacttccccacaatggagtttggaaatctgcgttccttcattaagttatttggtgttaaatcatcatcaggaaccatagagcttggtccattcgttaaccttccacgtgattgccaagaacttgccatttcatgcctttattacttctccaacctgcttcccgacacaatggagctgttggcttcttgttgcttaagtgatgtgctggaacccaccatattgtttagaattattgaggttctacagtcaacatacaaggctgggaatttacatataacagagcaactcagtttcttgtcattgctaatggcacgattcagagttcatcctgggtctttctctacccaggataattcccagaagggctcaaatatgaatacttttaaatcattgaaccgcctaattttaaattctctatctgaaatgggtgatggctccctggttcttgagttaatgtgggataatttatctaaagagattgcacagataccatctttacataacatgaatggattgtttagaattattgtcacacttgatgcaggaacttgtaagctcatgaacgaagatgctataaaaattatagctggctacttgattgatgctgctatggatttgtctaaaaccattgagcttggctttcaatctgataggacaagactatttcaatactttataaagccttgcataatcatattttgccagaacgagaaggttctttgctgcgcattggagatgcttaaatctttcgcaacaggagatgaccacgtgctttcatctgcatccaagttaaactacccaggagagctttcacatcgaatttgtgttgtcacaactatactcatattcttatgcaatgatggaaaactccataaaaacctttctttgggcaaatgtgttattaaaggtatcctgcaacatacaaggcatctcatggattctaatgttcttgatgtaacatatgaggacaagcagaagttaagatttgcatttgagcaactaaagacgaaagcattgcagttgaactgctgggacagaagtgagctggaagggttttcaagcaccacgtaa</cdnaseq>

Protein Sequence

<aaseq>MGRPKGGAAASSSSSKKPKAKPKQRGGVDFKKYKHKVGRKLPPP KNATDTEIKSRAIVLPEQSMASERAGMAVNKRGLTLRELLQQTGHYNANVRRAALNGI KDLVAKHPSELKLHKVAIVEKLQERICDTDKVVRESLFSILQSLVFPSLKEDNAISTR STLFLLMANILNGMTHLSMDIQLMSFRFLELVVINFPSSFPGYAEQVFNNFLAVLSND RIHLQDKSKLNSVLSGLGQCLSQVAYATENGDASNRLVHNLSGRELWKCTLDEDNSGS RAFAMSNILMKLQNLFQILVNSVEVSVSELFAKSTIDAQSSEALLSALHCLDLICNIC IQEVKKPQMKFGRSKIQVGPEWLKSSVLVYAKKLWGVNRSFHEKGDDRYYVFNLKIAE IFLCLSACMDNTIFPADEFCQFVSSLLAKAKTLRNKDTMEKHLSPLITFIPDLVSNAP DDSKGYLLEAFTDAFWDCKVDCKLIFPYLDAVGKMLFPEKTGILFVENDSGSEYHGVW VKELPGILLQSIDKAPSVTKVVLELLLRIGQYFPTMEFGNLRSFIKLFGVKSSSGTIE LGPFVNLPRDCQELAISCLYYFSNLLPDTMELLASCCLSDVLEPTILFRIIEVLQSTY KAGNLHITEQLSFLSLLMARFRVHPGSFSTQDNSQKGSNMNTFKSLNRLILNSLSEMG DGSLVLELMWDNLSKEIAQIPSLHNMNGLFRIIVTLDAGTCKLMNEDAIKIIAGYLID AAMDLSKTIELGFQSDRTRLFQYFIKPCIIIFCQNEKVLCCALEMLKSFATGDDHVLS SASKLNYPGELSHRICVVTTILIFLCNDGKLHKNLSLGKCVIKGILQHTRHLMDSNVL DVTYEDKQKLRFAFEQLKTKALQLNCWDRSELEGFSSTT</aaseq>

Gene Sequence

<dnaseqindica>7087..7221#6453..6776#5789..5920#5563..5711#5266..5400#5041..5175#4846..4939#4618..4737#3754..3840#3550..3663#3288..3416#2666..2970#1913..1976#1599..1745#1142..1300#719..888#459..581#275..347#79..171#accacgccgccgccgccgccgccgtctcgtcagcaagcgctgcccggagagagagagaaagagagacgcgcccgcgccatggggaggccgaagggcggcgccgcggcgtcctcctcctcgtcgaagaagcccaaggcgaagccgaagcagcgcggcggcgtcgacttcaaggtgagttccccccctcccctcccccaactgaagcgacgcccgctccgacgagctcactggtgttcgggtgtgtgtgtgttttttttctcttcgtggctcgcagaagtacaagcacaaggtggggcggaagctgccgccgccgaagaatgccaccgacacggagatcaagtccagaggtgagctgcgggcgcctcttttttttttttttccctcggtggcctgaggttttcgcagcagggcgcgtaatttagggtttcggattgtgatgtgcgcgtgtgtggttgcagcgatcgtgctgccggagcagagcatggcgtcggagagggctggcatggccgtgaacaagcgcgggctcacgctgcgggagctcttgcagcagacgggccactacaatgccaatgtgcgccgaggtgagccaccgataggcagtctctgcgcggactgccacccagatggccagataaacagttgattcgatcgatcgattcggcctgtgcttgatgagactagctaacttgggctgcattgttatgttattttgttgaagctgcgctgaatgggataaaggatcttgttgctaagcatccatcagagcttaaacttcacaaggttgcaattgttgagaagctacaggaaagaatatgtgacactgacaaggtggttcgtgaatccttgttcagtatactgcagtctctcgtcttcccatctttgaaagaggtatttccccacttcttgccagttatttctgaattcgtgagagatctcacgaggttgctatgattcacaagctattggtaacttgatcactgtttttcttcccccaattgtctattttagtttcatcatgctgaccatacgggctcttctagctactaatggatttccatatcttattccttctatcatttccattttctagttctatgctattggctgcatatgtgagacaattggtatctatttatggcaggacaatgcaatatcgacacgcagtacactgtttctgctgatggccaatattttgaacggaatgacccatctatccatggatatccagttaatgtctttcagatttttggagcttgttgttattaatttcccatcctcctttccaggatacgctgaacaggtgaatgggtttctttcatgtattggtgttttgaaagttgaaaaggttcttgtgttaggaggcaatgtattggtggctacttgcccctgacatgtgcccttcttccttttatctctatttacagaagatgggaggtgttaaattaacataaaatatttcatagtctatctttcatcaactaattatatgtaccaaggcatatgctattgaaacttcttctaattcctgctaggatttatgtgagatttagcacattcatacctagtaataatctcagtttcattatttcttctgataggtcttcaacaactttcttgctgtactgagcaatgacaggattcatctccaggataagagtaaacttaacagtgtccttagtgggctcgggcagtgtctttctcaggttgcttatgcaacagaaaatggtgatgcatcaaatcgactggtttgtacagttgaatcatcattttatattattttactcttaaaattagttggagctatagcaactaacttagtgaaacagaaaatttgcatgttcagcaatgtatctgtatcaaacaccttctttgtcatattggaatgatcagaatattttctaatcgtctacaggttcataatctttctggtagggaactttggaaatgtactcttgatgaagataactcaggaagtagtaagtcttctacatgtttcccatgttttattggtccctaatttgatattcaatttatgttgctacgcctccttaaattcaaattcatttgtaagataaccagagaaagctctgcagtaaacatatcagaccactcaacttaatctatattcatttacaatttagccttgtttaccatgcatttctagcttgctagctttttcatgaaacaacacactaaacaacaaatttactatctccaatgaactgttgatttatttatttattttattttattattatttattattattttattattattttttttttgggggggggtcacagttgcactttccttttggttatgtggactggaaaatgtttaatcagaatagttaattgattgttaatggaaatttgtttggtttagtttagaatacagtggaagaacaatactatatggaaatgacactgttgtattataaaatatcttttacgcttttttaagttttatgcacatcctacatgaatactccctccgtccaaaaatataaaggattttgggtagatgtgacgcatcctagtaatatgaatttggactgactcccttatattttgggacggaaggagtacttgttatttcttttcttgtgccattaagttaagacaggcttgatattatgtcttataaacctgatgcactgcaggagcatttgcgatgtccaatatattaatgaagcttcaaaacctcttccagattctcgttaattctgtagaggtctcagtttcagaactttttgcaaagtcaactattgatgctcagtcaagtgaagcattattatcagctcttcactgtctggatctaatatgtaacatatgtattcaagaggtaaagaaacctcagatgaaatttggaagatccaaaattcaggttggacctgaatggttgaaaagttccgtgttagtatatgcaaagaaattgtggggagtaaaccgttcattccacgaaaaggtttcaatttcttccccttttcatttctacctccatactactggtatgataatatttaaaacgtttcgtgaccaattaatagataaaatatgctactaatatgatcaaccaatagataaagcatgccatttttgtgttctctactcatagtgatatctgactctctgtggtatcaaaacttttggaaccctggctggagattaatttcagattttgttctattccagactgttaattgtgttcttcagaaagcctggttatagcatatcttttgctgacaatctcagtgatttcttatggaactcttttcatggcagggagatgacagatattatgttttcaatctgaagattgctgaaatatttttgtgcttgagtgcatgtatggacaacaccatatttccagctgatgaattttgccagtttgtatcttctctacttgcaaaggttgtctgtggctgccagtttcaaggactgatttctatcactggctagttgaaagttctttagtccgcttgtgcatgttgttctatagctatcgtcttatagacagctattaattattcatttattttgtcaggcaaaaacacttcgcaataaggataccatggaaaagcatttgagcccacttataactttcataccagatcttgtatccaatgccccagatgactcaaaaggatatttattagaggtatgactaattttccttttactgatctctagaaagtatttgggttactttttaacgttacgaaaaatgagagactatattcaactgcaggcatttacagatgcattctgggattgcaaggtggattgcaagctgattttcccatatttggatgcagtgggaaaaatgctgtttcctgtaggttccttctatgggatacatactaaacttcctttgctacataacttcttctctctttttttcttttttttttttttgtgggtgacgtgttcaggttattaagaaataggacttgatgaagagcatgcctagtgaaaattgcctacttggtgctaacacacaaatatcttttagggagaaatgcatctccacatgtacatgcattacatgcactattataactgtaagtgcttgaagatttgggtgatggtatgaagatctgtaggttgatttgaattttcagtgttcgaatctggattctggaaccacatttgatggtgatgttagttcatgtacctgcatgaacattggtgggttgtcaaattagttattagttaaaaaaaaagatggtgaatagtccttgtaccaatttatatcacatgaaattccaaaataaatctttaaaccgctgtatagagaaacataaaagagaacctttgtctaatgatgaatatagatataatcaaacaaggcaaaacttgctgtccccaaacaccatccatgctgagatttgaaaatttacaggttgttaagtcacttggtagatcgtatgttcaacttgttcctggaggactttgcattcctccttattagatgctcaaagcctcaaactaaataattttgcatatttcatcatgctgagaattacctccctacagctactagcgccaaaaatgtgctagtggataacggcttacatatgctttctattaatattcatttgcctgtggttaggaaaaaacaggaatattatttgtggaaaatgattcaggctctgaataccatggtgtgtgggtaaaagagctacctggaattctactacaatcaattgacaaagccccctcagtaacaaaggtctgctataggtttatttatccagtatagagttggaatactcagattgggcattaatgaaaccttttcaataaatagtgtactttatgatcatatgaattatcataggttgttttggagctacttctaagaattggacagtacttccccacaatggagtttggaaatctgcgttccttcattaagttatttggtgttaaatgtaagtataaaattactggttgaagatcttttttatcctctatgatttatcgctttatgtgtaattccatttttcttggactaatgacattttgctaatagcatcatcaggaaccatagagcttggtccattcgttaaccttccacgtgattgccaagaacttgccatttcatgcctttattacttctccaacctgcttcccgacacaatggagctgttggcttcttgttgcttaagtatgcatttttgcttctctgttctgcgtttagtgtcgttatattctttcctttaaggattacaggtggtacataatttatggaatgcaggtgatgtgctggaacccaccatattgtttagaattattgaggttctacagtcaacatacaaggctgggaatttacatataacagagcaactcagtttcttgtcattgctaatggcacgattcagagttcatcctggtgagtacttttttttttggaaggcaaacttttcttagtttaagtggcttactttaggtgaaaatttcatactatgtgttttgctctttaagttttatcctctaatggttattttatctgacatttttttctaacagctttccttttgttttgttaaactagggtctttctctacccaggataattcccagaagggctcaaatatgaatacttttaaatcattgaaccgcctaattttaaattctctatctgaaatgggtgatggctccctggttcttgagttaatgtgggataatttatctaaagagattgtgaggattcaaaccatgctatgtttttatgttttcacccaaaatccattgaactcatatatgtttgttttgtgcaggcacagataccatctttacataacatgaatggattgtttagaattattgtcacacttgatgcaggaacttgtaagctcatgaacgaagatgctataaaaattatagctggctacttgattgatgctgctatggtgtgtactcttctgaattctaaagctctggactctggtatttgcagtcagtaatttggtaaatttgtacgctaattcaggagaacgtagtcgaaaatggcagattagtcgaaaatggcagattggcgtattttgatgttagaaaacctattgcctatagatctgatataatcggatctaacattattttatgcatattctttgaaaactatgagagttcactaacagagcatatttacgtggtagcatagggagagtatcgtgagtaataagctcttcacatcacctggtgaagcgcagagtgtcagattgaatgcattacggcataaacgtttttttcagttacactagcttatggatggtaattatgagtttgacacctgcaaagcttttggcaaacaggtgcattaattcattgtcatataaattagaagcgcatctccttgattagttcataagcattgctttatcgctgtacttttttgggttttgatgagaattgatttcacccaattttattgtgtacatgcaggatttgtctaaaaccattgagcttggctttcaatctgataggacaagactatttcaatactttataaagccttgcataatcatattttgccagaacgagaaggttctttgctgcgcattggagatgcttaaatctttcgcaacaggagatgaccacgtgctttcatctgcatccaagttaaactacccaggagagctttcacatcgaatttgtgttgtcacaactatactcatattcttatgcaatgatggaaaactccataaaaacctttctttgggcaaatgtgttattaaaggtatcctgcaacatacaaggcatctcatggtaagtggtgataacataaatgcctttgtttggtagccatattaactgatgagatttcagtttcctacattttagtcatttttcatattaatcttaaattcagggaggtcagaatatcaagggcaaaattgaacatttgtgcatgtgaatcgtatgtagactagtttgttgaatttgttcctactatgagagaatatttgtcctgtgctgtacctagatcactatcactagcttgctctattatgcctaaatgtcgttgttgtgaaactggccttcctaatgagtttgctctattcaatacttgctgcaggattctaatgttcttgatgtaacatatgaggacaagcagaagttaagatttgcatttgagcaactaaagacgaaagcattgcagttgaactgctgggacagaagtgagctggaagggttttcaagcaccacgtaaatagtaccaaatactaatggtatgtgggctccttcgtcattgtttgctaattatgttgatttattgtttttttttaaaaaaacgaatgaacttacttccatcccatatgataggtactgccgtaatgtgaaaccttactctgcacgggatgaaaattttgacgaactgaaggtgaagatggagagtggacatggtgactggtgaggggcagaaggatatgtgccatccgacctgcgtcagactccagtatacacctctgctgttcagctgttaccaacactttacgaaggtctgtactttacccaaagattaatttcacacttcgattctatcttaatcctatgtttcccaaacggtctacgatttgccataaacacacgagtttctcaggagcactaggtagatttgtcatgtttgacaacaacgtgcctgacagtaatatcttgctattgcaggtggccggaaaatgcattgttcacatgttgggaacgaggtggtccactggtccatgtatcattgtggtacagcgcttggttttgatgcaacagaattgcagtttagactgctcaatagaccataggttatttcaccgaaaggtttacatttcaacctacatgtccatgtaagaatcccgatgtaaatgtagaaattttgttttggaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0466700, RefSeq:Os04g0466700