Difference between revisions of "Os04g0494800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0494800| Description = Protein of unknown function DUF642 family protein| Version = NM_001059724.1 GI:115459177 GeneID:4336268| Length = 18...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0494800|
 
GeneName = Os04g0494800|

Revision as of 19:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0494800

Description

Protein of unknown function DUF642 family protein

Version

NM_001059724.1 GI:115459177 GeneID:4336268

Length

1871 bp

Definition

Oryza sativa Japonica Group Os04g0494800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25139249..25141119

Sequence Coding Region

25139633..25139735,25139900..25140397,25140519..25141057

Expression

GEO Profiles:Os04g0494800

Genome Context

<gbrowseImage1> name=NC_008397:25139249..25141119 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25139249..25141119 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgcgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagaaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccacagccaccgccggttccttctgtaa</cdnaseq>

Protein Sequence

<aaseq>MRRKTEMIQTTPCVALLLLVGVAFAARSASAITDGLLPNGNFEE APDKSQMNGTRVTGRYAIPQWEISGFVEYIGSGQKQGDMLLPVPEGAYAVRLGNEASI QQRLTLTRGMHYSITFSAARTCAQSELLNITITPESGEIPIQTVYTSSGWDSYSWAFK AKHSVVLFIVHNPGVSDDEACGPLIDSFAIKTLNPPQRTKGNMLKNGGFEEGPYIFPN TSWGVLVPPMDEDDYSPLSPWTILSTTKSVKYIDAAHYAVPGGARAVELVSGMETAML QEVSTVPGRSYRLEFSVGDAGDGCSGSLTVQAYASRGSVKVTYQSQGTGGYKRGLLEF TATEKRTRVVFVSMAYTTKSDGTLCGPVIDDASLVSVHSHRRFLL</aaseq>

Gene Sequence

<dnaseqindica>385..487#652..1149#1271..1809#gcccatgcaaaagaaacagaatggcaagccaaaccaccatgtgaccccaggcaaacgcagacaacgccttccccggtcgccgcctcgccaagggaccccatttccacggcacctcagaaccgaggagagatgccctgccaacctcctcgatcgtggcggtccgcggatccggcgctcgtttcgctcggtttcctgcagaaaacacgctgtccatctggagttctggacatctggtctgaactctgaacaccgatccgttctctataattaagtgacagcatatcacaatctcctgtacagttctaaacctgtttgctgtccaatcccattgccaccttgcttacaaccaagtaataacaggagcagtacttgctcagagaggtgatgagaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggtaagagccttccatagtacatttgccagcttaagatcgtacatgcgatttagacggttaatcagttgcacgataaatttgtgacgctcatttctgcttagatagtactgaaaatgacgaaagatcgctgatatgtcattctgcttgctgcgtgtatttttcaggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaattaattaattgagccgggtgctaacctctccacaaagctgctatcagtgtgcatctctacaaaattgaatacaaggatgtgctcacagtcatgaaacaatcgaacaaaatgaaccaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgcgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagaaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccacagccaccgccggttccttctgtaatattattactatcgtcaaagtcactagaatttaaaatgacttaaagttgtcccatatgaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0494800, RefSeq:Os04g0494800