Difference between revisions of "Os04g0524600"

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(Created page with "{{JaponicaGene| GeneName = Os04g0524600| Description = Oligopeptide transporter OPT superfamily protein| Version = NM_001059886.1 GI:115459501 GeneID:4336442| Length = 452...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0524600|
 
GeneName = Os04g0524600|

Revision as of 19:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0524600

Description

Oligopeptide transporter OPT superfamily protein

Version

NM_001059886.1 GI:115459501 GeneID:4336442

Length

4523 bp

Definition

Oryza sativa Japonica Group Os04g0524600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26646281..26650803

Sequence Coding Region

26646405..26646421,26646845..26646867,26648206..26648369,26648446..26648543,26648654..26648785
,26649137..26649329,26649430..26650533

Expression

GEO Profiles:Os04g0524600

Genome Context

<gbrowseImage1> name=NC_008397:26646281..26650803 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26646281..26650803 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgcacgcgaacgcctacggcatcgccttcagcggtgggtttggcacatacttgtttggtatgagtgaaacaattgctaagcaagcaacagaggctaataatgctcagaatgtcaagaaccctcacatcgggtggatgattggattcctcttcctcgtcagttttattgggctacttgctcttgtgcctctgagaaaaattatgattgtcgactacaaactgacctatccaagtggcacggcaacagcttatcttatcaatggcttccacaccccagagggtgcaaagcttgctaagaagcaagtaaaggaactggggaaattctttttgttcagcttcgtttggggcttctttcagtggttctatactgccggagatggttgtggattccagagcttccctacattaggccttcaagcctataaaaacaggttttactttgatttctcccctacctatgttggagtagggatgatttgcccccacattgtgaacgtatctgttctattgggaggcatcctctcatggggaatcatgtggcccctgataagaaacaagaaagggagttggtatgctgcctctctctcagaaactagtcttcatggactgcaaggctacagggtgttcatatccattgccttgattcttggagacggcctgtacaacttcgtgaaggtgctcatccgcacaaccgctggcttcgtcgtgatgatgaagaagaacagcacgcttccggtctccaacaatggcagcccgatggtggccactgaagccatctccttcgacgacgagcgccgcaccgagctcttcctcaaggaccagatccccaagacggtcgcgttcggggggtacgtcgccgtcgccgccgtatcgatcggcacgctcccgcagatcttcccgcagctcaagtggtactacatcctggtcgcctacgtcttcgcgcccgtgctggccttctgcaacgcctacggcgccgggctgacggactggtcgctcgcgtccacgtacggcaagctcgccatcttcatcttcggcgcgtgggccggcgcgtcgaacggcggcgtgctggtcgggctcgccgcctgcggggtgatgatgagcatcgtgtcgacggcgtccgacctgatgcaggacttcaagacggggtacctgacgctggcgtcgccgaggtccatgttcgtcagccaggtgatcggcacggcgatggggtgcgtcatcgcgccgtgcgtcttctggctcttctacaaggccttcgccgacatcggcgtgagcggcaccgagtacccggcgccgtacgccatcgtgtaccggaacatggccatcctcggcgtcgacggcttctcctcgctgcccaagcactgcctcacgctgtgctacatcttcttcgccgcggcgatcgccatcaacctggcaagggacctggcgccaagcaaggtggcgaggttcatcccgctgcccatggcgatggcgatcccgttctacatcggctcctacttcgccatcgacatgttcatcggcaccgtcatcctcttcgtgtgggagatggtgaacaaggccaaggcggaagcgttcgcgccggcggtcgcctccggcttgatctgcggcgacggcatctggacattgccgcagtccatccttgccctcgccaaggtgaagccgccgatctgcatgaagtttctgtcgcgatcggtgaatgcgcaagtggatggtttcctgggtaactag</cdnaseq>

Protein Sequence

<aaseq>MASHANAYGIAFSGGFGTYLFGMSETIAKQATEANNAQNVKNPH IGWMIGFLFLVSFIGLLALVPLRKIMIVDYKLTYPSGTATAYLINGFHTPEGAKLAKK QVKELGKFFLFSFVWGFFQWFYTAGDGCGFQSFPTLGLQAYKNRFYFDFSPTYVGVGM ICPHIVNVSVLLGGILSWGIMWPLIRNKKGSWYAASLSETSLHGLQGYRVFISIALIL GDGLYNFVKVLIRTTAGFVVMMKKNSTLPVSNNGSPMVATEAISFDDERRTELFLKDQ IPKTVAFGGYVAVAAVSIGTLPQIFPQLKWYYILVAYVFAPVLAFCNAYGAGLTDWSL ASTYGKLAIFIFGAWAGASNGGVLVGLAACGVMMSIVSTASDLMQDFKTGYLTLASPR SMFVSQVIGTAMGCVIAPCVFWLFYKAFADIGVSGTEYPAPYAIVYRNMAILGVDGFS SLPKHCLTLCYIFFAAAIAINLARDLAPSKVARFIPLPMAMAIPFYIGSYFAIDMFIG TVILFVWEMVNKAKAEAFAPAVASGLICGDGIWTLPQSILALAKVKPPICMKFLSRSV NAQVDGFLGN</aaseq>

Gene Sequence

<dnaseqindica>125..141#565..587#1926..2089#2166..2263#2374..2505#2857..3049#3150..4253#gtactagtgtatttcacgataaatacaacggcggcccaccaccacctcgctccgtagtgtccgcacagcgaacgcctctcgcgcgcgtgcttactggtgactggtccaagcagcaacgcaagcaatggcgtcgcacgcgaacgcctccggcggcggcggcgacgaggagatggtggaggcgagcacgctccgccaccggcacggcgccggcaaggatgccaacggcgtcggaactgagcggcagctggcggcggcggcggcggaaggggaggaggaggggccgtcgtcggtggagcgcgcgttcgtggacagggcggtgccgtcgtggcgggagcagctgacggtgcgcgcgttcgtggtgagcttcttcctctccatcatgttcagcatcatcgtgatgaagctgaacctcaccaccgggatcatcccgtcgctcaacgtctccgccggcctcctcggcttcttcttcgtccgcctgtggacggcggccatcgagcgggtggggctcctccggcagccgttcacgcgccaggagaacacggtcatccagacctgcgtcgtcgccgcctacggcatcgccttcagcggtaagaccgtaagatcttcaaagtcaacgtagctactacttccatttctgggggtcacctcgagactccagtaggctacatcactctgattgcatcaataataaacacgcttttcatcttggctagcgctcttttctgattaatatttagattttatcttagtttttgttagcacgtcttttaaattgctgaattgtgcatgcattttgtgccaaaactttttatatagaaattactttaaaatacaaataattttatttttaagtttataataattaaaactcaattaatcatataggagtatttggtacttgggctcgaaaactgaattaaaagtagagttgggggatgcgaaaaaagagaatatatataccaccattgttttccgttggaactatagtactccactttgttcttgcagttcttgcatgagaacttatatacaaagattttcactgggattttttgacgaaaatcagtaagaaaaaactcacacataacaattttaaaaagtttgtacgaactcacctagaaaaaatagcaagttttggagtagttcgaagataccgctacactttataattttctaatcacgtgttcgtcagcgtgatcagcagtcagcgttgtccagccaaattgcagtactccgtatgtccaaatccaggattacctcaagctgaaacacacaataatatttgagtagacgaatgctgatgtgacactgttgacttaacataaacaatggatcgctccttccatatcttatccggttttggtgttttcataatataattatttcaagtctactcctcacccagtcagtttatttttatgggttgttggttatcggccacatttcatcatcatttctaaataaaagttgtcacactatctaagttaaagtgatcaaattatttaccacaccaacttaagaaaatcttgtcatacttttttgagttattgatgtgtatgatctacaatttgtttgaaaataagttctgaaaataaattcactttacttccttacttattactcctatcagtcaacaaataaatcaattatattcttttagtattcctttcctagttcctatccacccaccaaaactactttggtattaatcattagtagtgcagtctttttttcccgtccatactaatccaataactaagttatttttgggtccgagatttttttttttagataatgaattgggtccgagatactgctagatcattttcatgtgccattcttcactgctttactttccctttctaagtatggagacgtaatgagcatgttactgtacggagtactgactcgtcccaaatgatcaggtgggtttggcacatacttgtttggtatgagtgaaacaattgctaagcaagcaacagaggctaataatgctcagaatgtcaagaaccctcacatcgggtggatgattggattcctcttcctcgtcagttttattgggctacttgctcttgtgcctctgagaaaagtaaagtcttctacctgtttcggacttacagattcgcaagaattgctgtttactaatcaactgatttttttttcagattatgattgtcgactacaaactgacctatccaagtggcacggcaacagcttatcttatcaatggcttccacaccccagagggtgcaaagcttgctaagtaaaccatctgactgttctactttttgctactgctatatttccttagtgccgtaaattagcatgacatgagtggaacagagttactgacaacatagttttatgcttcaggaagcaagtaaaggaactggggaaattctttttgttcagcttcgtttggggcttctttcagtggttctatactgccggagatggttgtggattccagagcttccctacattaggccttcaagcctataaaaacaggcaagaagattgattttcgatgcctatatcttgggtttgaatgatgacacatttgagtgttagatgtctaatattagaaaatagcttagtgtttgttgggggagtgacttcgccaaatttcacccatagggattcctccttctatagacaagaaggctccgtaggatcctccgaactggagtccgcaggtgcctgcggaggggctccgaaaggacccccgagggtccctcccctctcgatccgtgcttgatccttgtttgattctgttccaacactgttctgaatgtatttggttagaacactgaacagcttaccttgctgaacttcacaatttcacattccatctttcaggttttactttgatttctcccctacctatgttggagtagggatgatttgcccccacattgtgaacgtatctgttctattgggaggcatcctctcatggggaatcatgtggcccctgataagaaacaagaaagggagttggtatgctgcctctctctcagaaactagtcttcatggactgcaaggctacagggtaagtaaacattcaaaaaaaaaaaatcctcccttttgctgctatacagctatagttgatagttaccaagcagctaatgtggtgttcctgactactgcaggtgttcatatccattgccttgattcttggagacggcctgtacaacttcgtgaaggtgctcatccgcacaaccgctggcttcgtcgtgatgatgaagaagaacagcacgcttccggtctccaacaatggcagcccgatggtggccactgaagccatctccttcgacgacgagcgccgcaccgagctcttcctcaaggaccagatccccaagacggtcgcgttcggggggtacgtcgccgtcgccgccgtatcgatcggcacgctcccgcagatcttcccgcagctcaagtggtactacatcctggtcgcctacgtcttcgcgcccgtgctggccttctgcaacgcctacggcgccgggctgacggactggtcgctcgcgtccacgtacggcaagctcgccatcttcatcttcggcgcgtgggccggcgcgtcgaacggcggcgtgctggtcgggctcgccgcctgcggggtgatgatgagcatcgtgtcgacggcgtccgacctgatgcaggacttcaagacggggtacctgacgctggcgtcgccgaggtccatgttcgtcagccaggtgatcggcacggcgatggggtgcgtcatcgcgccgtgcgtcttctggctcttctacaaggccttcgccgacatcggcgtgagcggcaccgagtacccggcgccgtacgccatcgtgtaccggaacatggccatcctcggcgtcgacggcttctcctcgctgcccaagcactgcctcacgctgtgctacatcttcttcgccgcggcgatcgccatcaacctggcaagggacctggcgccaagcaaggtggcgaggttcatcccgctgcccatggcgatggcgatcccgttctacatcggctcctacttcgccatcgacatgttcatcggcaccgtcatcctcttcgtgtgggagatggtgaacaaggccaaggcggaagcgttcgcgccggcggtcgcctccggcttgatctgcggcgacggcatctggacattgccgcagtccatccttgccctcgccaaggtgaagccgccgatctgcatgaagtttctgtcgcgatcggtgaatgcgcaagtggatggtttcctgggtaactagatgtgatcagcctgaaatcatcgccaatgtgaacaaccactctgtatcatctgtgtcatcatcctgcaatctcggtttcaaaaaaaaaaaatcatcctgcaatcaggatatcgtatgttctgttagggattgtactataatctgtctctgaacacctgtatatgttagtggagtgtgacaatcatccttgaatccttgattccaaatttccagtgttgtaattgtatatatattcctgcaatcatcagtaagtggcgttctactgtctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0524600, RefSeq:Os04g0524600