Difference between revisions of "Cox1"
(Created page with "{{Mitochondrion| GeneName = cox1| Description = cytochrome c oxidase subunit1| Version = GeneID:6450122| Length = 1576 bp| Definition = Oryza sativa Japonica Group ''cox1'', M...") |
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AA = <aaseq>MTNLVRWLFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVAITSSSGKNKRCAESPWAVEQNPTTLEWLVQSPPAFHTFGELPAIKETKS</aaseq>| | AA = <aaseq>MTNLVRWLFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVAITSSSGKNKRCAESPWAVEQNPTTLEWLVQSPPAFHTFGELPAIKETKS</aaseq>| | ||
DNA = <dnaseqindica>1..1576#atgacaaatctggtccgatggctcttctccactaaccacaaggatatcggtactctatatttcatcttcggtgccattgcaggagtgatgggcacatgcttctccgtactgattcgtatggaattagcccgacccggcgatcaaattcttggtgggaatcatcaactttataatgttttaataacggctcacgcttttttaatgatcttttttatggttatgccggcgatgataggtggatttggtaattggtttgttccgattctgataggtgcacctgacatggcatttccacgattaaataatatatcattctggttgttgccaccaagtctcttgctcctattaagctcagccttagtagaagtgggcagcggcactgggtggacggtctatccgcccttaagtggtattaccagccattctggaggagcagttgatttagcaatttttagtcttcatctatcaggtgtttcatcaattttaggttctatcaattttataacaactatcttcaacatgcgtggacctggaatgactatgcatagattaccactttttgtgtggtccgttctagtgacagcattcctacttttattatcacttccggtactggcaggggcaattacaatgttattaaccgatcgaaactttaatacaaccttttttgatcctgcaggagggggagacccaatattataccagcatctcttttggttcttcggtcatccagaggtgtatattctcattctgcctggattcggtattattagtcatatcgtatcgaccttttcaagaaaaccggtcttcgggtatctaggcatggtttatgccatgataagtataggtgttcttggatttctagtttgggctcatcatatgtttactgtgggcttagacgttgatacgcgtgcctacttcaccgcagctaccatgatcatagctgtgcccactggaataaaaatctttagttggattgctaccatgtggggaggttcgatacaatacaaaacacccatgttatttgctgtagggttcatctttttgttcaccataggagggctcactggaattgttctagcaaactctgggctagacattgctctacatgatacttattatgtggttcgcacatttccattatgtactttctatgggagccgtttttgctttatttgctggattttactattgggtgggtaaaatctttggtcggacatatcctgaaactttaggccaaatccatttttggattacttttttcggggttaatctgaccttctttcccatgcatttcttagggctttcgggcatgccacgtcgcattccagattatccagatgcttacgccggatggaatgctctgagcagtttcggttcttatatatccgtagttgggattcgtcgtttcttcgtagttgtcgcaatcacttcaagcagtggaaagaacaaaagatgtgcggaaagtccttgggctgttgaacagaatccaaccacactagaatggttggtacaaagccctccagcctttcatacttttggagaacttccagctatcaaagagacaaaaagctag</dnaseqindica>| | DNA = <dnaseqindica>1..1576#atgacaaatctggtccgatggctcttctccactaaccacaaggatatcggtactctatatttcatcttcggtgccattgcaggagtgatgggcacatgcttctccgtactgattcgtatggaattagcccgacccggcgatcaaattcttggtgggaatcatcaactttataatgttttaataacggctcacgcttttttaatgatcttttttatggttatgccggcgatgataggtggatttggtaattggtttgttccgattctgataggtgcacctgacatggcatttccacgattaaataatatatcattctggttgttgccaccaagtctcttgctcctattaagctcagccttagtagaagtgggcagcggcactgggtggacggtctatccgcccttaagtggtattaccagccattctggaggagcagttgatttagcaatttttagtcttcatctatcaggtgtttcatcaattttaggttctatcaattttataacaactatcttcaacatgcgtggacctggaatgactatgcatagattaccactttttgtgtggtccgttctagtgacagcattcctacttttattatcacttccggtactggcaggggcaattacaatgttattaaccgatcgaaactttaatacaaccttttttgatcctgcaggagggggagacccaatattataccagcatctcttttggttcttcggtcatccagaggtgtatattctcattctgcctggattcggtattattagtcatatcgtatcgaccttttcaagaaaaccggtcttcgggtatctaggcatggtttatgccatgataagtataggtgttcttggatttctagtttgggctcatcatatgtttactgtgggcttagacgttgatacgcgtgcctacttcaccgcagctaccatgatcatagctgtgcccactggaataaaaatctttagttggattgctaccatgtggggaggttcgatacaatacaaaacacccatgttatttgctgtagggttcatctttttgttcaccataggagggctcactggaattgttctagcaaactctgggctagacattgctctacatgatacttattatgtggttcgcacatttccattatgtactttctatgggagccgtttttgctttatttgctggattttactattgggtgggtaaaatctttggtcggacatatcctgaaactttaggccaaatccatttttggattacttttttcggggttaatctgaccttctttcccatgcatttcttagggctttcgggcatgccacgtcgcattccagattatccagatgcttacgccggatggaatgctctgagcagtttcggttcttatatatccgtagttgggattcgtcgtttcttcgtagttgtcgcaatcacttcaagcagtggaaagaacaaaagatgtgcggaaagtccttgggctgttgaacagaatccaaccacactagaatggttggtacaaagccctccagcctttcatacttttggagaacttccagctatcaaagagacaaaaagctag</dnaseqindica>| | ||
| + | Link = [http://www.ncbi.nlm.nih.gov/gene?term=6450122 NCBI Gene:cox1] | ||
}} | }} | ||
[[Category:Genes]] | [[Category:Genes]] | ||
Revision as of 14:17, 27 October 2012
| Gene Name |
cox1 |
|---|---|
| Description |
cytochrome c oxidase subunit1 |
| Version |
GeneID:6450122 |
| Length |
1576 bp |
| Definition |
Oryza sativa Japonica Group cox1, Mitochondrion gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Mitochondrion:338572..340147 |
| Sequence Coding Region |
338572..340147 |
| Genome Context |
<gbrowseImage1> name=NC_011033:338572..340147 source=Rice_Japonica_Mitochondrion preset=GeneLocation </gbrowseImage1> |
| Gene Structure (RNA Editing) |
<gbrowseImage2> name=NC_011033:338572..340147 source=Rice_Japonica_Mitochondrion preset=GeneLocation </gbrowseImage2> |
| Protein Sequence |
<aaseq>MTNLVRWLFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVAITSSSGKNKRCAESPWAVEQNPTTLEWLVQSPPAFHTFGELPAIKETKS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1576#atgacaaatctggtccgatggctcttctccactaaccacaaggatatcggtactctatatttcatcttcggtgccattgcaggagtgatgggcacatgcttctccgtactgattcgtatggaattagcccgacccggcgatcaaattcttggtgggaatcatcaactttataatgttttaataacggctcacgcttttttaatgatcttttttatggttatgccggcgatgataggtggatttggtaattggtttgttccgattctgataggtgcacctgacatggcatttccacgattaaataatatatcattctggttgttgccaccaagtctcttgctcctattaagctcagccttagtagaagtgggcagcggcactgggtggacggtctatccgcccttaagtggtattaccagccattctggaggagcagttgatttagcaatttttagtcttcatctatcaggtgtttcatcaattttaggttctatcaattttataacaactatcttcaacatgcgtggacctggaatgactatgcatagattaccactttttgtgtggtccgttctagtgacagcattcctacttttattatcacttccggtactggcaggggcaattacaatgttattaaccgatcgaaactttaatacaaccttttttgatcctgcaggagggggagacccaatattataccagcatctcttttggttcttcggtcatccagaggtgtatattctcattctgcctggattcggtattattagtcatatcgtatcgaccttttcaagaaaaccggtcttcgggtatctaggcatggtttatgccatgataagtataggtgttcttggatttctagtttgggctcatcatatgtttactgtgggcttagacgttgatacgcgtgcctacttcaccgcagctaccatgatcatagctgtgcccactggaataaaaatctttagttggattgctaccatgtggggaggttcgatacaatacaaaacacccatgttatttgctgtagggttcatctttttgttcaccataggagggctcactggaattgttctagcaaactctgggctagacattgctctacatgatacttattatgtggttcgcacatttccattatgtactttctatgggagccgtttttgctttatttgctggattttactattgggtgggtaaaatctttggtcggacatatcctgaaactttaggccaaatccatttttggattacttttttcggggttaatctgaccttctttcccatgcatttcttagggctttcgggcatgccacgtcgcattccagattatccagatgcttacgccggatggaatgctctgagcagtttcggttcttatatatccgtagttgggattcgtcgtttcttcgtagttgtcgcaatcacttcaagcagtggaaagaacaaaagatgtgcggaaagtccttgggctgttgaacagaatccaaccacactagaatggttggtacaaagccctccagcctttcatacttttggagaacttccagctatcaaagagacaaaaagctag</dnaseqindica> |
| External Link(s) |
