Difference between revisions of "Os04g0555800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0555800| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001060055.1 GI:115459839 GeneID:4336623| Length = 247...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0555800|
 
GeneName = Os04g0555800|

Revision as of 19:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0555800

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001060055.1 GI:115459839 GeneID:4336623

Length

2470 bp

Definition

Oryza sativa Japonica Group Os04g0555800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28219172..28221641

Sequence Coding Region

28219303..28219526,28220150..28220243,28220418..28220509,28220626..28220764,28221326..28221610

Expression

GEO Profiles:Os04g0555800

Genome Context

<gbrowseImage1> name=NC_008397:28219172..28221641 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28219172..28221641 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacaagcggcagcgggaagcgcggaagcgcttccgcgaggcgaacccgggcctcttccccgccaacccgacccctcccgccgacggcaccaagaagaagaagaacaacaagaagagcatgttcaagaagacgagtaaggcgggtgggggaggcgcggggaggtcgaagcacccgctccgggtccccgggatgcggcccggggagcggtgcttcatctgcaaggccgcggaccacgtcgccaaggtctgccccgagaagtccctctgggagaagaacaagatttgcttgctctgcaggcaacgaggtcatagcctgaagaattgccctgacaaaaatgatgaaaatttgaagaaattctgttataattgtggtgaatctgggcactcactttccaagtgccccaaacccattgaaaatgggggtacaaagttcgcaagctgttttgtctgcaaacagcagggacatttgagcaagaattgtcctgaaaacaaacacggcatttatccaaagggaggttgctgtaagatatgtggtgaagttacacacctggccaagcattgtccaaacagagggaggcaagacttgatatcttctggggatgatgctttcaatacggaggagcatcacctggaagacaatgctgttctccggggtggagatgaccttgatgacgattttattgaagaagaagaaacaagacacaccaaggcaaagaaggctaaacaatctagttcaaaatctaccacagagacaggcgatggtgacaagaataccaacactaaggcaaaagtaaaacaagctccgaaagttgtaaaattctttggttaa</cdnaseq>

Protein Sequence

<aaseq>MANKRQREARKRFREANPGLFPANPTPPADGTKKKKNNKKSMFK KTSKAGGGGAGRSKHPLRVPGMRPGERCFICKAADHVAKVCPEKSLWEKNKICLLCRQ RGHSLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSK NCPENKHGIYPKGGCCKICGEVTHLAKHCPNRGRQDLISSGDDAFNTEEHHLEDNAVL RGGDDLDDDFIEEEETRHTKAKKAKQSSSKSTTETGDGDKNTNTKAKVKQAPKVVKFF G</aaseq>

Gene Sequence

<dnaseqindica>2116..2339#1399..1492#1133..1224#878..1016#32..316#gacggcgagagagcgtccgtagcccaaggcgatggcgaacaagcggcagcgggaagcgcggaagcgcttccgcgaggcgaacccgggcctcttccccgccaacccgacccctcccgccgacggcaccaagaagaagaagaacaacaagaagagcatgttcaagaagacgagtaaggcgggtgggggaggcgcggggaggtcgaagcacccgctccgggtccccgggatgcggcccggggagcggtgcttcatctgcaaggccgcggaccacgtcgccaaggtctgccccgagaagtccctctgggagaagaacaaggtatctgcctaccaccattcgtctcaaaatccctgccttttgcaagctcttggggataatttttgctcggcccaatgtcttttgctatagaagccatggacctaagaacgtcaattaaggtgaccttaggtttagatcagcatttgtactttctgactttctgttattattgggggttaaaaccaacgaaatcagtatgggttttctgtttattgttctgtttatgccttgttctgtttaatgttgcggggtgttatttacgttatgcaatacctagcagtgggcactgggcagtgcgtgtattggttgttctgtatttttttgttttatcacacgttgtatctatctctaggtgaatggcaaaacggtgacttctggaggccatcctgataagtgttttactgcttccattccaacctttaatcagtggattctggctgtcacagttatatattttcagtcagtagtattttttttttcagtacttagttgcctcaaagtctgaccagttcatttgtggttttcaagctaaaatttaatatttatattttcttctttcagatttgcttgctctgcaggcaacgaggtcatagcctgaagaattgccctgacaaaaatgatgaaaatttgaagaaattctgttataattgtggtgaatctgggcactcactttccaagtgccccaaacccattgaaaatggtaaataatacatcctttcatctcatacagttgccagtttccatactcgatacctgcaaatagttaccctcagccatatgatttcctcgcacatttagcatgatttttgcatacagggggtacaaagttcgcaagctgttttgtctgcaaacagcagggacatttgagcaagaattgtcctgaaaacaaacacggcatttatccaaaggtattatcagatactctgttgtcccttatcaccacaagatcttggactgagataacattctgcatttaggggctcaaaatgtccactttgaaggatgttctgcttgcattatctttcctttatttagttgcatgtctccattacgtgtggattctaactctatacatttgttagggaggttgctgtaagatatgtggtgaagttacacacctggccaagcattgtccaaacagagggaggcaagacttgatatcttctggggatgatggtaaacacaaacctcaactgtaacattttgtgggaactgtcttaacattcctccacggtatcatgtgtattgtacttttgctgattcattttaaaaaatttggaactttcactaacttcttgtagctgatctttgtatccacttgttattaatactgtttacatttagtaaataaccattgaagtgttttcatggatgtatagaccatacgcttgttttgacaatacattggagaaagaagaacagattatgtttaccttttctatccatgtgagaattaaggattaatacttagatgtaagcatttggctaaccttatgaggagaaaatgactagcctgccaggcgtgcctcttttgttttgttaaagaaacataacatgatgctatactgtaacatagaatctgtgccgatgggtaattgggtgaatacgcctttagtagtagcagtctggctaaggcgccaagcagatgccatcatgctaatgtgtgagataagttatgatttcttatatgtttgagatggtctataattttgtccgatggtgctatcaaacatctggtaacttttttccgtacagttattagtagccgctcatttatttggtcttctgcttatttctagctttcaatacggaggagcatcacctggaagacaatgctgttctccggggtggagatgaccttgatgacgattttattgaagaagaagaaacaagacacaccaaggcaaagaaggctaaacaatctagttcaaaatctaccacagagacaggcgatggtgacaagaataccaacactaaggcaaaagtaaaacaagctccgaaagttgtaaaattctttggttaaactatgtaacctttgtagcttaccagtaatgatacagaagaagatccttccgaacattttgtctattgggggatcacggttttgtaacgtacaacgggaatttaatatgatctactgttcaatgttttgag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0555800, RefSeq:Os04g0555800