Difference between revisions of "Os04g0561900"

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(Created page with "{{JaponicaGene| GeneName = Os04g0561900| Description = Peptidase S9A, prolyl oligopeptidase family protein| Version = NM_001060090.1 GI:115459909 GeneID:4336660| Length = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0561900|
 
GeneName = Os04g0561900|

Revision as of 19:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0561900

Description

Peptidase S9A, prolyl oligopeptidase family protein

Version

NM_001060090.1 GI:115459909 GeneID:4336660

Length

3268 bp

Definition

Oryza sativa Japonica Group Os04g0561900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28525522..28528789

Sequence Coding Region

28525789..28526016,28526124..28526202,28526287..28526661,28526761..28527109,28527227..28527327
,28527409..28527680,28528334..28528444,28528557..28528706

Expression

GEO Profiles:Os04g0561900

Genome Context

<gbrowseImage1> name=NC_008397:28525522..28528789 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28525522..28528789 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcacggcgaagcatgggagccctggccgctgtctgcgtctgcatgttcgtcttcgtctcctccgcacgggcagaagatccgtatagatttttcgattgggaggttactactgggaacatcaatcctctcggcgtccagcagcagggtattctgatcaatgggcaatttccggggccggagattgactgccagacgaatgataacttgatcgtcaacgtgcacaaccgtttgtcggagccgtttcttctgtcatggaacgggcttcagcacaggaagaactcgtggcaggacggcgtgtccggcacgaactgcccgatcccgccgggccagaacttcacctaccaaatgcaggccaaggaccagatcggcagcttcttctacttcccgtcgctcgccttccacaaggccgccggcggctttggcgccatccgcatccgcagccgcccgctgatccccgtccccttcgatccgccggccggcgagtacaccatgctgatcggcgactggtacaagaccagccacaaggctctgcaagccatgctggacagtggaaagcagctgccttcccctgatggcatcctgattaacggcaaaggtccaaatggcgcaagcttcaccgttgagcaagggaagacgtacagattgcgcgtctccaacgtcggcctgcagagcacgctcaatttgaggatccaagaccacaacatgacgctggtcgaggtggagggcacgcacacggtgcagaacacctacagctccctctacgtccacgccggccagtcgctgtccgtgctgttcacggccaaccgcccgcccggcgtctaccaaatcaccgtctccacccgcttcgccaagcgtgcactcaactcgtccgccgtcctgcgctacgccggctcgagcgccaccatctcctcaccgccgccaccggctggcctcgccgacgacatcgacttctcgctcgaccaggctcgctccatcaggacgaacctgacggcgagcgggccacggccgaacccgcagggctcgtaccactacggctcgatcaacgtgacacgcacaatccggctcgccaactcggcggggcgcgtcgccggcaagcagcggtacgccgtgaacggcgtgtcgttcgtggaggccgacacgccgctcaagctggccgactactacaggatcagcgacgtgttccggctcggcggcatcccggacgcgccgcccgcgggcgccgcggcggctccgcggagcgaggcggccgtgatggactccgactaccggtcattcctcgagatcgtgttcgagaacagcgaggacagcgtccagatctggcacctcgacggctacagcttgttcgtagttgggatggacaggggagtgtggagcgagcagagcaggaagagctacaacctcgtcgacgcagtctcccggtgcacggttcaggtgtacccgagggcgtggacggcggtgttggtggcgctggacaatgtggggatgtggaacctcaggtcggaggactgggcgcgcaggtatcagggccagcagttctacctccgcgtgtacacgccgtcgcactcgttccgcgacgagctccccatcccgagcaacgcgctccgctgcggccgcgccaccaacgcgagcggcagaagccgaaccctgtcgcggtactag</cdnaseq>

Protein Sequence

<aaseq>MSSRRSMGALAAVCVCMFVFVSSARAEDPYRFFDWEVTTGNINP LGVQQQGILINGQFPGPEIDCQTNDNLIVNVHNRLSEPFLLSWNGLQHRKNSWQDGVS GTNCPIPPGQNFTYQMQAKDQIGSFFYFPSLAFHKAAGGFGAIRIRSRPLIPVPFDPP AGEYTMLIGDWYKTSHKALQAMLDSGKQLPSPDGILINGKGPNGASFTVEQGKTYRLR VSNVGLQSTLNLRIQDHNMTLVEVEGTHTVQNTYSSLYVHAGQSLSVLFTANRPPGVY QITVSTRFAKRALNSSAVLRYAGSSATISSPPPPAGLADDIDFSLDQARSIRTNLTAS GPRPNPQGSYHYGSINVTRTIRLANSAGRVAGKQRYAVNGVSFVEADTPLKLADYYRI SDVFRLGGIPDAPPAGAAAAPRSEAAVMDSDYRSFLEIVFENSEDSVQIWHLDGYSLF VVGMDRGVWSEQSRKSYNLVDAVSRCTVQVYPRAWTAVLVALDNVGMWNLRSEDWARR YQGQQFYLRVYTPSHSFRDELPIPSNALRCGRATNASGRSRTLSRY</aaseq>

Gene Sequence

<dnaseqindica>2774..3001#2588..2666#2129..2503#1681..2029#1463..1563#1110..1381#346..456#84..233#acagcaggcgccgcgcgcgctatcgatctccgccgcctgaccgccgtaccaccgtctcccggcagctagcgtcgaccggcgtcatgtcgtcacggcgaagcatgggagccctggccgctgtctgcgtctgcatgttcgtcttcgtctcctccgcacgggcagaagatccgtatagatttttcgattgggaggttactactgggaacatcaatcctctcggcgtccagcagcaggtgtagattttgatggatctgttctgctgttcatctttggtcagggttgatgtgtacgctgtttctctaattcttttagtacttgtttgtgtgtgtttttttcttcatgtagggtattctgatcaatgggcaatttccggggccggagattgactgccagacgaatgataacttgatcgtcaacgtgcacaaccgtttgtcggagccgtttcttctgtcatggcaagttcactttacacagaaacgctctcaagcgttgcacccagtcaatctgcgttcttgctcattttcatcattagtttgtacaaattatgtgcactattctgtagatgaacttatctttggtttgattgaatatactgctaaacatcaactaggctagatttgtcatggggaacccaaaacgtggaagtttgttttggaacgcattttgcgtgcagattaggttgattacatgattagctagcttttgtagtcgcgtccgtgcatctaatacaccacaaacttagagagagagtttagttattgccttaggctgtgtttagttccttccaaagttggaagtttgggttaaaattggtacgatgtgactgaaaaattgtgtgtgtatgacaggttgatgtgatggaaaaagttggaagtttggatccaaaatttgaatctacacacagccttgttggcatacgtttccactttgtttccgtttttgttatgtatgctagttttagatcacctccgacgtttattttcggtcctgaaatacaatcttagatcacgcatatgtgcattatttcaaacatgccatccctcacaattacatcgattctttaccgtaactacaaaaatcaaaaatgcaaagtcacaaacaattgcaggaacgggcttcagcacaggaagaactcgtggcaggacggcgtgtccggcacgaactgcccgatcccgccgggccagaacttcacctaccaaatgcaggccaaggaccagatcggcagcttcttctacttcccgtcgctcgccttccacaaggccgccggcggctttggcgccatccgcatccgcagccgcccgctgatccccgtccccttcgatccgccggccggcgagtacaccatgctgatcggcgactggtacaagaccagccacaaggcatggcattgcagttacactaatttcatcaacagtagatggatccttgtactaagtgattgttttgctgttgctgcttaggctctgcaagccatgctggacagtggaaagcagctgccttcccctgatggcatcctgattaacggcaaaggtccaaatggcgcaagcttcaccgttgagcaaggtgaggccttttgcctttacgtagaacacaactattttcgagtgaccttgaccaatctgatcataccgtgagattttcaagcacgggtaatgtgtacttttttttttctttttgcagggaagacgtacagattgcgcgtctccaacgtcggcctgcagagcacgctcaatttgaggatccaagaccacaacatgacgctggtcgaggtggagggcacgcacacggtgcagaacacctacagctccctctacgtccacgccggccagtcgctgtccgtgctgttcacggccaaccgcccgcccggcgtctaccaaatcaccgtctccacccgcttcgccaagcgtgcactcaactcgtccgccgtcctgcgctacgccggctcgagcgccaccatctcctcaccgccgccaccggctggcctcgccgacgacatcgacttctcgctcgaccaggctcgctccatcaggttcgccgcatcgcctcatcctgaccgtccgtttctcgcgatggacggcagatgctggtactgaccggtgggtttcttttgatgttttcccaatcccaggacgaacctgacggcgagcgggccacggccgaacccgcagggctcgtaccactacggctcgatcaacgtgacacgcacaatccggctcgccaactcggcggggcgcgtcgccggcaagcagcggtacgccgtgaacggcgtgtcgttcgtggaggccgacacgccgctcaagctggccgactactacaggatcagcgacgtgttccggctcggcggcatcccggacgcgccgcccgcgggcgccgcggcggctccgcggagcgaggcggccgtgatggactccgactaccggtcattcctcgagatcgtgttcgagaacagcgaggacagcgtccagatctggcacctcgacggctacagcttgttcgtagttgggtacggcccacgttacatgcctcctgactaatgcagcccgcaccatctggtctcatctgttcgctgattttggcattgtcgcaggatggacaggggagtgtggagcgagcagagcaggaagagctacaacctcgtcgacgcagtctcccggtgcacggttcaggtaacacacgcagccacgtttcactcgacgcgggcgccgagcagtgcggatatacacgaaaacgaattgcggactggctaaattgctcgcttgatggcgctgtgcaggtgtacccgagggcgtggacggcggtgttggtggcgctggacaatgtggggatgtggaacctcaggtcggaggactgggcgcgcaggtatcagggccagcagttctacctccgcgtgtacacgccgtcgcactcgttccgcgacgagctccccatcccgagcaacgcgctccgctgcggccgcgccaccaacgcgagcggcagaagccgaaccctgtcgcggtactagttgacaaaccggctggtgcttgtcaacgaccctaacacaacaccaggagttactcggccatgacaagtttggccaggtatatataccgtatacgcaaatgcatcaaagttttactcggccatatcacaagtttggctggttgggtttatttagcgtgagttcagtttgtaaggcgtaaatgaactccatataaacaaggggtgggaccaaagtgtagcctatatgccttttcttactcgccaatgcacattgccaggtttaatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0561900, RefSeq:Os04g0561900