Difference between revisions of "Os04g0562800"

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(Created page with "{{JaponicaGene| GeneName = Os04g0562800| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001060095.1 GI:115459919 GeneID:4336666| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0562800|
 
GeneName = Os04g0562800|

Revision as of 19:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0562800

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001060095.1 GI:115459919 GeneID:4336666

Length

3678 bp

Definition

Oryza sativa Japonica Group Os04g0562800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28569105..28572782

Sequence Coding Region

28569105..28570269,28570354..28570517,28571235..28571297,28571495..28571718,28572077..28572782

Expression

GEO Profiles:Os04g0562800

Genome Context

<gbrowseImage1> name=NC_008397:28569105..28572782 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28569105..28572782 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcaaggggtccaagctggaggaccaggaggccgtcgcgctgtgccgcggccgcgccgagctgctggccgccgccgtgcgccaccggtacgcgctcgccgacgcgcacggggcgctcgcggactcgctccactcgatggccgcgccgctgcaccgcctcctcctcctccagctccaggcctcctcgccgcagctcacgctgcctacggcacgcaagggcggtcgtccgcggaccgccgccgccgccgccacgttgtcgcttcctcacggccgttcggcgcacctcgacgacctcgggtcgccgtccggatccgagacggcctcgccggccgactcgcccctccgcgcattccccgagcagcagctcccctacccgcattacgcgtacgggtacgggacggggcccgcgttcgcgtacccgccgcctccggcgagctccctgcagttctactacgcgcgcagccgccctccgccgccgtcggtcggcgtcgcgcagcgcgcgccggtgtcgacggagcgcgtgtactacggctcgttcgacccgaccagcggttacccgcagtattacgccaacggcggcgtgccggccacagccgcgccgcagcggatggcggctcccgcgcctcctcgttcgccgccaagggagagctcctgggccttcttgaacgtgttcgcgaactacgagccgtacgacaactattactacgactccacagccgcagcggcctctgccgcggcgtacacgccgagcaggagctcgcgggaggtgcgggaggaggagggcatcccggagctggaggaggacgaggacgactgcgtgttcaaggaggtggccagcggcgggtactcggctgggagcggcggacaccgcagccggcgcagctcgattggtagcctgagcagcgtcgccgagcaggagaacgccgtcattgacaatgacgtcgtagctagcaccagtgagatataccggaggccactggcacaccggaatgtcgccatgcgcgcgctagcacaggcagcgcagagggtcgccggcaacggcggcaatgtggatgttgccggggagatcaaggcccagcttgttcgggcagcagaagcaacaagggagctcgcgccattgctggaggtcgggaagccgagctaccaagaacacagccatgcttcatcacggctgatgtcgtcaatccctgtgcctaacttggggtgcaaaggcgtggacttggtggacattagaggaggaggggtaatggtggactcgaagagcctatccttgacactggagaagctctatttctgggagaggaagctgtatggtgaggtcaagttttatgcaattatgacctgctgtagactggtccagaagaagtttggtcctggatgccggcaggccgaggagaaaatgcgtttacttcttgccaagaactctaaacgactcaaattattggaccaaaggggtgctgaggctcataagatcgatgcaacaagaaatttgctgaggaaattgtcaacaaagattaaaatagctgtccgtgttattgccaaggtttcaacaaagataaacaaagtgagggacgaggaattagggccacaagttaatgccttgatccaagggtttatcaaaatgtggcagtataagctacactcttaccacacacagtttcaagtgatctcggaagccaaaaacttggtttctgtcgtgtcacgtgaaaatggacctgatctggcaatggagcttgaactagagttgattaaatggatcatcaatttttcgtcttgggtgaacgctcataggaactttgtaagggcattgaatggatggctagcactctgtcttaactacgagactggggagacaacttatggggaacccccttattcacctggaagaataggcgctccattggtttttattatctgcaacagatggtctcaagctatggatcagatttctgagaaggatgtggttaacgccatgaaagctcttgtgtctagtgtacagcacttgtgggagcagcaaaatcaagaagagggtgaagaacgaatcctagcaatccgagaaagggaaagatggatgaagatgttggaaaagaagacgctagaggttaaaagggaagctgatgaattaaacaagaagctggccctagtactgaggcggcagagtttgcatcagcgtccaacaatgcaaacatacgaagcccattgtgttgaagcaagcagcgtacatataaatttgaggttagttcttcaagctctggagaattttgctgccaactccctgcaagccttccaagagatactgaggcaatctgacagctga</cdnaseq>

Protein Sequence

<aaseq>MGCKGSKLEDQEAVALCRGRAELLAAAVRHRYALADAHGALADS LHSMAAPLHRLLLLQLQASSPQLTLPTARKGGRPRTAAAAATLSLPHGRSAHLDDLGS PSGSETASPADSPLRAFPEQQLPYPHYAYGYGTGPAFAYPPPPASSLQFYYARSRPPP PSVGVAQRAPVSTERVYYGSFDPTSGYPQYYANGGVPATAAPQRMAAPAPPRSPPRES SWAFLNVFANYEPYDNYYYDSTAAAASAAAYTPSRSSREVREEEGIPELEEDEDDCVF KEVASGGYSAGSGGHRSRRSSIGSLSSVAEQENAVIDNDVVASTSEIYRRPLAHRNVA MRALAQAAQRVAGNGGNVDVAGEIKAQLVRAAEATRELAPLLEVGKPSYQEHSHASSR LMSSIPVPNLGCKGVDLVDIRGGGVMVDSKSLSLTLEKLYFWERKLYGEVKFYAIMTC CRLVQKKFGPGCRQAEEKMRLLLAKNSKRLKLLDQRGAEAHKIDATRNLLRKLSTKIK IAVRVIAKVSTKINKVRDEELGPQVNALIQGFIKMWQYKLHSYHTQFQVISEAKNLVS VVSRENGPDLAMELELELIKWIINFSSWVNAHRNFVRALNGWLALCLNYETGETTYGE PPYSPGRIGAPLVFIICNRWSQAMDQISEKDVVNAMKALVSSVQHLWEQQNQEEGEER ILAIRERERWMKMLEKKTLEVKREADELNKKLALVLRRQSLHQRPTMQTYEAHCVEAS SVHINLRLVLQALENFAANSLQAFQEILRQSDS</aaseq>

Gene Sequence

<dnaseqindica>1..1165#1250..1413#2131..2193#2391..2614#2973..3678#atggggtgcaaggggtccaagctggaggaccaggaggccgtcgcgctgtgccgcggccgcgccgagctgctggccgccgccgtgcgccaccggtacgcgctcgccgacgcgcacggggcgctcgcggactcgctccactcgatggccgcgccgctgcaccgcctcctcctcctccagctccaggcctcctcgccgcagctcacgctgcctacggcacgcaagggcggtcgtccgcggaccgccgccgccgccgccacgttgtcgcttcctcacggccgttcggcgcacctcgacgacctcgggtcgccgtccggatccgagacggcctcgccggccgactcgcccctccgcgcattccccgagcagcagctcccctacccgcattacgcgtacgggtacgggacggggcccgcgttcgcgtacccgccgcctccggcgagctccctgcagttctactacgcgcgcagccgccctccgccgccgtcggtcggcgtcgcgcagcgcgcgccggtgtcgacggagcgcgtgtactacggctcgttcgacccgaccagcggttacccgcagtattacgccaacggcggcgtgccggccacagccgcgccgcagcggatggcggctcccgcgcctcctcgttcgccgccaagggagagctcctgggccttcttgaacgtgttcgcgaactacgagccgtacgacaactattactacgactccacagccgcagcggcctctgccgcggcgtacacgccgagcaggagctcgcgggaggtgcgggaggaggagggcatcccggagctggaggaggacgaggacgactgcgtgttcaaggaggtggccagcggcgggtactcggctgggagcggcggacaccgcagccggcgcagctcgattggtagcctgagcagcgtcgccgagcaggagaacgccgtcattgacaatgacgtcgtagctagcaccagtgagatataccggaggccactggcacaccggaatgtcgccatgcgcgcgctagcacaggcagcgcagagggtcgccggcaacggcggcaatgtggatgttgccggggagatcaaggcccagcttgttcgggcagcagaagcaacaagggagctcgcgccattgctggaggtcgggaagccgagctaccaagaacacagccatggtaagctaccaccttttctattcttttctgtgctgcattatgtgctgcattatgtgacttgcattgttaattctttggggttagcttcatcacggctgatgtcgtcaatccctgtgcctaacttggggtgcaaaggcgtggacttggtggacattagaggaggaggggtaatggtggactcgaagagcctatccttgacactggagaagctctatttctgggagaggaagctgtatggtgaggtcaaggtatgctcatctttgggacatgatttggtgattgatgataatgtgcaccgaaattaggtgaaaccataatgctcgtacatatgcattctgttttggtgtcaaacatatagaggtaatgcagaacaagttacgactctgttgctcacagtagtgtcactaggtcctctggtttgtatcttaaagttagttctacgctagctctggaactttgatagtgttttatgtatagtccaaatgcccttctgcttgaacaaaagtaacagtatctgaatatagcattggcatcctactaaagaattttgacccccaatttcttgagatgtcacgcaatacattacctaactttcaggtatctaaaaggttgcaaatgctgaaaaaaatgtgatatccatctgttgctagtcatagtgttacttgatttgttttgctggtggaggagctttgttagcattttcttattaattgatcttggcatgaaagggtccactagattgtacctggtattatgggaattgactttgcaggctaacggccagatcttaagcactcctgtgactaatagctaaaaatataattactctgttgagctccaacaccgtctcataggtagcttgtggaacccagaaaaacacatgaatatggttctgaggtacctgtcggttttgtttcagtgatggggatttggcatacttttttcttttctgttttgtgtcacagttttatgcaattatgacctgctgtagactggtccagaagaagtttggtcctggatgccggcaggtccatttaagcgctatgtctaagcttttcagaccaaaattcagtgtaactggatagttttgttccctgggatgctaggtttatagttgttgtagagctgcttcatgtgaaccagcgttggccatgtccatggatgtgttcaacccaatatcctctttgcatagtattcttactgctctattatatttctctcgcaggccgaggagaaaatgcgtttacttcttgccaagaactctaaacgactcaaattattggaccaaaggggtgctgaggctcataagatcgatgcaacaagaaatttgctgaggaaattgtcaacaaagattaaaatagctgtccgtgttattgccaaggtttcaacaaagataaacaaagtgagggacgaggaattagggccacaagttaatgccttgatccaagggtatgtcccccttttaactcaaggatagttgctcctacatttttgttaggttatcttttttgttgttaatctgaatgttcaaatctgatagtttcagtaaaatttcaagtgttactttgatgttatgcattgcgaactgaataaattcaatgaactgggggaaggtcatgaattaatatctataattgttgaatgagttagattctttcatattgcacattgaattgtgaataggtggtattaaaaggttgaagtacctggctgcctcttagctgacttccctcaataactttcatctatgtctcatttagttccagccctttctaacaaagtgataacacttgataacactttccaggtttatcaaaatgtggcagtataagctacactcttaccacacacagtttcaagtgatctcggaagccaaaaacttggtttctgtcgtgtcacgtgaaaatggacctgatctggcaatggagcttgaactagagttgattaaatggatcatcaatttttcgtcttgggtgaacgctcataggaactttgtaagggcattgaatggatggctagcactctgtcttaactacgagactggggagacaacttatggggaacccccttattcacctggaagaataggcgctccattggtttttattatctgcaacagatggtctcaagctatggatcagatttctgagaaggatgtggttaacgccatgaaagctcttgtgtctagtgtacagcacttgtgggagcagcaaaatcaagaagagggtgaagaacgaatcctagcaatccgagaaagggaaagatggatgaagatgttggaaaagaagacgctagaggttaaaagggaagctgatgaattaaacaagaagctggccctagtactgaggcggcagagtttgcatcagcgtccaacaatgcaaacatacgaagcccattgtgttgaagcaagcagcgtacatataaatttgaggttagttcttcaagctctggagaattttgctgccaactccctgcaagccttccaagagatactgaggcaatctgacagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0562800, RefSeq:Os04g0562800