Difference between revisions of "Os04g0564000"

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(Created page with "{{JaponicaGene| GeneName = Os04g0564000| Description = Carbohydrate-binding family V/XII domain containing protein| Version = NM_001060101.2 GI:297603179 GeneID:4336672| L...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0564000|
 
GeneName = Os04g0564000|

Revision as of 19:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0564000

Description

Carbohydrate-binding family V/XII domain containing protein

Version

NM_001060101.2 GI:297603179 GeneID:4336672

Length

2304 bp

Definition

Oryza sativa Japonica Group Os04g0564000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28672028..28674331

Sequence Coding Region

28672028..28672276,28672388..28672611,28673463..28673662,28673839..28674115,28674262..28674331

Expression

GEO Profiles:Os04g0564000

Genome Context

<gbrowseImage1> name=NC_008397:28672028..28674331 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28672028..28674331 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgccgccgccgccgtctccaccctctccgcgctcgccgtcttcgcgagcaccctcgaccacggcgccgtgaggagcgtgcacgggtacaaggtctacgggaggggagggaggcggaggtgggagaggtgggtggagagggagttcgtcctcaccccggcgtcgtgccgcgaggtcccggcccccgtcgcgccgccacggatactgccggcggagtggcgcggccggccggcgtaccgcgaggggcaggtggtggcggcgggagcctggcgctgcattctggccttcgattccgccgccgcgccgccgcgcacgccgccgcccgtgctctcccccttcctgaatccgaggttgatgtgtgtgccttccctgtacaacgacctggaaaaggtgtttcggtttcagaatgtagagaagatccccaagctcatgcagtgtgattcggaggagaaactgagcagttgggatgcacgggataaaagttctgatgaggttcatgcatcagagtctgattctgatgatgatctccaatctggtgaagaagaaaagccaacagttcagaagcagcggagagctaacaagaagcatatagccagcattactctagttgacatagctcagtacttccatctcccaatcagagaagcatcaaggactctgaagatcggagtcagcatactgaagaggaaatgccggcaatataacataccccgctggcctcaccggaagatcaagtcccttgattccctcattcaagatcttgagtatgtgattgatgatggtgatgatcatgatgacacgggagatgatgtgcagcaggagaagcacaagcagacggcagaggagaagcaggaggcgatcatggcgctcacaaggcggaagcagatgctggagaccgagaaagagaccatccagcagattcctgccatggacctgaaggtagaaaccaagcagttcagggaagatgttttcaagaggagatacagagcaaaaaaagatttagccaacgattag</cdnaseq>

Protein Sequence

<aaseq>MDAAAAAVSTLSALAVFASTLDHGAVRSVHGYKVYGRGGRRRWE RWVEREFVLTPASCREVPAPVAPPRILPAEWRGRPAYREGQVVAAGAWRCILAFDSAA APPRTPPPVLSPFLNPRLMCVPSLYNDLEKVFRFQNVEKIPKLMQCDSEEKLSSWDAR DKSSDEVHASESDSDDDLQSGEEEKPTVQKQRRANKKHIASITLVDIAQYFHLPIREA SRTLKIGVSILKRKCRQYNIPRWPHRKIKSLDSLIQDLEYVIDDGDDHDDTGDDVQQE KHKQTAEEKQEAIMALTRRKQMLETEKETIQQIPAMDLKVETKQFREDVFKRRYRAKK DLAND</aaseq>

Gene Sequence

<dnaseqindica>2056..2304#1721..1944#670..869#217..493#1..70#atggacgccgccgccgccgccgtctccaccctctccgcgctcgccgtcttcgcgagcaccctcgaccacggtggctcgccatggctctcttttcttcttgattagttgatttcctcatcggcttcttcttcttcttcttcttcttcttcttcttcttcttcttcccggccgtcgcgtgacgtagaacgggttctttcttgcgtcgatgcattgcaggcgccgtgaggagcgtgcacgggtacaaggtctacgggaggggagggaggcggaggtgggagaggtgggtggagagggagttcgtcctcaccccggcgtcgtgccgcgaggtcccggcccccgtcgcgccgccacggatactgccggcggagtggcgcggccggccggcgtaccgcgaggggcaggtggtggcggcgggagcctggcgctgcattctggccttcgattccgccgccgcgccgccgcgcacgccgccgcccgtgctctcccccttcctgtacggtgatcgcatcgcatataaacaacgaaccgattccgacgcacggtcgttgcacgattttgattgcctccacaactgcttcagtttgcaatctactcctatcatcctatcactgagatcaagtgttgaaagcttcggttttgttttctcttcttctgtttttgacttttcaggaatccgaggttgatgtgtgtgccttccctgtacaacgacctggaaaaggtgtttcggtttcagaatgtagagaagatccccaagctcatgcagtgtgattcggaggagaaactgagcagttgggatgcacgggataaaagttctgatgaggttcatgcatcagagtctgattctgatgatgatctccaatctggtgaaggtgattgatcccctccactggaatctgttggtaactgtaaatttggttagcaatgcattctctctgtttctcagtgggggttgctactgatcagctggtacaacatcttattctactttgattctccctagtaaagaaaattggtggtggaaaaatagagaaatgcttcagattttcattctagtttgtagcagccaaactttatggtcgaggaaaggggcaggtagagtgaaactggcatatccttaagacggtttggcattgctgtttggttgcaggaatgttgattagattcccaggaatcatggagtaatcctaactaatttccatgtttggtaaaaccacctggaaatgtaaatcaggaaaataggattcggtgtaaacaagatccaagtaatgcgtggcattaggattcctttttaaacatgtgtctaccctggattacccactggacggaatcttgttgaactttgttgacacgtgcgctcccaataatgccgcattcgttactacctgattcccatggttaagggcaaatgtctaagggaaattatttcccacccctctttaaatcttaaccattcattcttcctcatccatttaatcctaacccttcattcatttcccaatcccaattccacccctcatttcccattatccaaacacaccctaagattaccatccatctcaatttcctgtaaccaaacatccaaaattgtattgctcatttcaaaattttaaaaagtatatatacctttcagaggtttgagatttcatattgtttggattgtttcgtgcttcctttctatttacttgaaaggttacaattaatctctatgggataaatgcagaagaaaagccaacagttcagaagcagcggagagctaacaagaagcatatagccagcattactctagttgacatagctcagtacttccatctcccaatcagagaagcatcaaggactctgaagatcggagtcagcatactgaagaggaaatgccggcaatataacataccccgctggcctcaccggaagatcaagtcccttgattccctcattcaagatcttgaggtaaatctggcagcaccctccatgtataattcagttcttcacctacgaaattgtttttactactagacattgatgcagttctgacaccaacacatcacatatttcctacagtatgtgattgatgatggtgatgatcatgatgacacgggagatgatgtgcagcaggagaagcacaagcagacggcagaggagaagcaggaggcgatcatggcgctcacaaggcggaagcagatgctggagaccgagaaagagaccatccagcagattcctgccatggacctgaaggtagaaaccaagcagttcagggaagatgttttcaagaggagatacagagcaaaaaaagatttagccaacgattag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0564000, RefSeq:Os04g0564000