Difference between revisions of "Os04g0564600"

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(Created page with "{{JaponicaGene| GeneName = Os04g0564600| Description = Similar to HMG1 protein| Version = NM_001060105.1 GI:115459939 GeneID:4336676| Length = 2929 bp| Definition = Oryza...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0564600|
 
GeneName = Os04g0564600|

Revision as of 19:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0564600

Description

Similar to HMG1 protein

Version

NM_001060105.1 GI:115459939 GeneID:4336676

Length

2929 bp

Definition

Oryza sativa Japonica Group Os04g0564600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28691705..28694633

Sequence Coding Region

28691817..28691842,28692007..28692087,28692213..28692270,28692370..28692414,28693880..28693948
,28694048..28694158,28694265..28694273

Expression

GEO Profiles:Os04g0564600

Genome Context

<gbrowseImage1> name=NC_008397:28691705..28694633 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28691705..28694633 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaaggccgacgccgacgccgagttcaaggccgccggcaagcgcaagaaggccggaggcgccggcaagcccaagcgcggcctcaccccgttcttcgccttcctggctgagttcaggccgcagtacatggagaagcacccaaacaccaagggcgtcgcagcggtgaccaaggctgccggggagaagtggcgcgctatgtcggacgaggagaaagcgcaatatgggggcaagaagccagatggcgagagcaagcccgcggccgctagcaagaagaaggagagcactagctctaagaaggctaaaactgatggtgcggaacaggagggagaaggttctgacaagtcgaagtctgatgttgaggatgatgagaatgatggcagtggcgaggacgagtag</cdnaseq>

Protein Sequence

<aaseq>MGKADADAEFKAAGKRKKAGGAGKPKRGLTPFFAFLAEFRPQYM EKHPNTKGVAAVTKAAGEKWRAMSDEEKAQYGGKKPDGESKPAAASKKKESTSSKKAK TDGAEQEGEGSDKSKSDVEDDENDGSGEDE</aaseq>

Gene Sequence

<dnaseqindica>113..138#303..383#509..566#666..710#2176..2244#2344..2454#2561..2569#aaccaaccaagacacaccacccaattcccctctcctcttcgctctcatctccgcttccagccagccactgcaaccctaaccctccgcaaagccctaccccccttccgccaccatgggcaaggccgacgccgacgccgagtaagtcacccgcaaccttgctctctccctcctcttgtggtttgggtcggtggaagcgagggccgatttgcctccgtttttttttttttttttttttttttttttttggtttctgctgctgctgctgttgtttctgatgcgcgtggctccctccgccgttgcaggttcaaggccgccggcaagcgcaagaaggccggaggcgccggcaagcccaagcgcggcctcaccccgttcttcgccttcctgtgagccttccctccctccgtctgcttgcgcctttcgtgcctccagatctacgtttttccccctttctgaattttgtggattttttttgaattttttttttggtcgctggtggtgtgtgtggcagggctgagttcaggccgcagtacatggagaagcacccaaacaccaagggcgtcgcagcggtgagtactctacctactctccgtctaccagatttgcttctagggtttcgtttctgtggctcatatgttgctcttgcttgctgattgtggtggatttaggtgaccaaggctgccggggagaagtggcgcgctatgtcggacgaggttagcagatgctggcagttgttgtactagcacgctttattatgcttctgtgcggggattcccgcaactgatatttgcacgtccaataagctgattacacttgtcgcatatcatgtgaaaaagcatattatatgcagttttctgagcttttagcagttattattagttatgacctgacgctttataaccacaaattatgccattcttcttcagtacacgtgctgtacagtggctttattgtctgttgcaacatgtatcgatccttagcatgcctgtgcagcaaagctatctagagtgctagctagactcatccatggtccatggatcacatcaagctcttacaggtaatgggtggagattctatacagctgtgaggttctttgagccatgtttttgggagaatgcactataggaaataaaatcacttgacaaaaaaaaaaatccagtgaaggtggcatgtcctttcaagtcgcaaatataactcccatgggatagaagttcaataacacaacttgtagttgttggtgagctctaagtcacagggaacgtggatcgtgggtgagttccttgtcccgggaattttgtcccggaacgaggaacgggaacgaagcggaacttcgttctgaaaacagaggggtcgtcgttccagcgatggaggaacgagaagggtggtaggatacgttgaacaaaaaaaaaatgagaagtggaactgagctacatatgcaaatataggatgatgatgtgagaggaactagcttgtagatctgaaaaacctttgtcaagaaaggaagaatgaatccatggctccttcatttaattgcttgtattttctctagttatctagttatttataagcgaaattggatctatagcatccaaagttaacatttttggttttatagcaatggaagtttatggttcattttaatagcttccaaaactctctggtactgttcatagcactattgtcagttttctcctgtttctgttactttgaccgttgtgggggaactgaccccccaaccccaccctcacttggttactgtaaacttcacatcgtgtgcccggtgtggggagtactcatgctaagttgggatttctgggtcaacagcaggcaaggggacgggaaacggagaaaggcggtggaagtgctacaaacagtaacgggtggagattttagtggtattaaagtaatcagtgaattttcggtgctataaaaccaaaaagggtaactttggatgatgtagagccaatttgcctattttatattacagggcatgtgtcattgcttagttggactgcagatatttcagttaatttttaggaatggtgtcattacttaactgggctacattattgggttgacggctcccttcacgggatctggcctcaaccattgtctgcttatttaagggaaatatcaatatatggcatttaacagaataattaatatatccttgtttaggagaaagcgcaatatgggggcaagaagccagatggcgagagcaagcccgcggccgctagcaagaagaaggtattattgcctttgtgaattatgtgatactgaccttgtactcttgcattttatattcatttttgtgctgataaatgtgttctcttacattttcattaggagagcactagctctaagaaggctaaaactgatggtgcggaacaggagggagaaggttctgacaagtcgaagtctgatgttgaggatgatgagaatgatggcagtggcgaggtatatagaacattatatagtacatggcggtgtttagcactgaaatggaaatgaattatgcctgtgctttattgtcactaacctcatcccaatttcttccttgcaggacgagtagtagtaaatagcttagagagctgcagctatgcaaatcggtgttcactgcttagggctttagctttgctatgttactgttatccttgttatgtcctgttgtaaggaaaacgtgcgaatgaaggtactcctgggccgtggcatgctggaggtgtctctgtttaactagtagcgaagaaaatgctgaatactgttgactgcttttcttttgcgaacctccgcagcatgtgtaaactattttgcttattcactgatctgatgactagtccgcgattggctttctgttaatcgcgtctgctgtattcatattctgttgtgtactcagttcgtgccgttattggtgcatctttggtttatctttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0564600, RefSeq:Os04g0564600