Difference between revisions of "Os12g0105300"
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<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. | <ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. | ||
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref> | Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref> | ||
| − | <ref name="ref3">The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.Ohyanagi H, et al. Nucleic Acids Res, 2006 Jan 1. PMID | + | <ref name="ref3">The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.Ohyanagi H, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381971，</ref> |
| − | <ref name="ref4">The map-based sequence of the rice genome.International Rice Genome Sequencing Project. Nature, 2005 Aug 11. PMID | + | <ref name="ref4">The map-based sequence of the rice genome.International Rice Genome Sequencing Project. Nature, 2005 Aug 11. PMID 16100779，</ref> |
Revision as of 10:16, 12 May 2014
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)
Contents
Annotated Information
Function
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)
Gene type
protein coding
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza
Evolution
This gene is conserved in Arabidopsis (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis [1][2].
Knowledge Extension
PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to AP008218.
On Jun 7, 2010 this sequence version replaced gi:115489835.
The IRGSP pseudomolecules (Build 4.0).
The orientation of the sequence is the short arm to the long arm of
the chromosome.
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14
The position of gaps in this pseudomolecule with unknown size is
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.
This sequence entry was annotated by the Rice Annotation Project.
http://rapdb.lab.nig.ac.jp/
References
Structured Information
| Gene Name |
Os12g0105300 |
|---|---|
| Description |
{{{Description}}} |
| Version |
{{{Version}}} |
| Length |
8411 bp |
| Definition |
Oryza sativa Japonica Group Os12g0105300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:259563..260472 |
| Sequence Coding Region |
40138313..40138869,40138972..40139293,40140765..40141055 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:40138313..40141055 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:40138313..40141055 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
{{{CDNA}}} |
| Protein Sequence |
{{{AA}}} |
| Gene Sequence |
{{{DNA}}} |
| External Link(s) |
- ↑ 1.0 1.1 The Rice Annotation Project Database (RAP-DB): 2008 update. Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,
- ↑ 2.0 2.1 Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,
- ↑ The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.Ohyanagi H, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381971，
- ↑ The map-based sequence of the rice genome.International Rice Genome Sequencing Project. Nature, 2005 Aug 11. PMID 16100779，
