Difference between revisions of "Os12g0105300"

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</references>
  
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== Structured Information ==
 
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{{JaponicaGene|
 
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GeneName = Os12g0105300|
 
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GeneID:9268278|
 
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Length = 8411  bp|
 
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Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
 
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AP = Chromosome 12:259563..260472|
 
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CDS = 40138313..40138869,40138972..40139293,40140765..40141055|
 
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GCID = <gbrowseImage1>
 
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name=NC_008394:40138313..40141055
 
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source=RiceChromosome01
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008394:40138313..40141055
 
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source=RiceChromosome01
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq></cdnaseq>|
 
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AA = <aaseq></aaseq>|
 
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DNA=
 
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<dnaseqindica>
 
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GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC
 
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TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG
 
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CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC
 
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CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC
 
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TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA
 
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TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT
 
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GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC
 
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AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA
 
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TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG
 
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CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA
 
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ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA
 
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ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG
 
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AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA
 
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CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA
 
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AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG
 
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CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT
 
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CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC
 
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AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC
 
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TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC
 
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ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt
 
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acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg
 
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ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac
 
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aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg
 
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ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa
 
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gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga
 
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gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac
 
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aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat
 
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tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct
 
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tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt
 
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tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg
 
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ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc
 
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cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt
 
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cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc
 
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ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat
 
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ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta
 
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gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag
 
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ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag
 
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gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg
 
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agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc
 
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taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg
 
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gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac
 
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gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta
 
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aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct
 
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gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc
 
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tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg
 
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aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag
 
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tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca
 
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atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc
 
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ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca
 
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atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat
 
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tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt
 
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taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct
 
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gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt
 
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agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc
 
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gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg
 
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cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa
 
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gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA
 
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ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC
 
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TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA
 
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CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC
 
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CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC
 
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TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC
 
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CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA
 
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ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG
 
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CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT
 
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CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC
 
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AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA
 
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TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC
 
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ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC
 
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AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA
 
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TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA
 
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AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG
 
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CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG
 
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TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA
 
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AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA
 
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GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA
 
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ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT
 
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CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG
 
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ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA
 
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CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA
 
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TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT
 
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CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT
 
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CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA
 
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GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA
 
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CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT
 
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TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC
 
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ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT
 
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AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC
 
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ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta
 
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gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt
 
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attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat
 
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attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga
 
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actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc
 
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taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat
 
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tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct
 
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tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt
 
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attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta
 
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attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt
 
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cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa
 
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tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat
 
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aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA
 
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CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG
 
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GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT
 
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GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA
 
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TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT
 
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TCTTTGTATT T</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|
 
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}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Revision as of 04:30, 12 June 2015

Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)

Annotated Information

Function

Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)

Evolution

This gene is conserved in Arabidopsis (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis [1][2].

Knowledge Extension

References

  1. ↑ The Rice Annotation Project Database (RAP-DB): 2008 update. Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,
  2. ↑ Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,