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| Line 19: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0842600|
| |
| − | Description = Similar to AAA-metalloprotease FtsH|
| |
| − | Version = NM_001051309.1 GI:115440988 GeneID:4327502|
| |
| − | Length = 5416 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0842600, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:37938310..37943725|
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| − | CDS = 37938596..37939060,37939135..37939362,37939901..37940668,37940838..37941320,37942471..37942598<br>,37943127..37943195,37943276..37943480,37943593..37943655|
| |
| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:37938310..37943725
| |
| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:37938310..37943725
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgagcctctcctccctctcccgcgccctcgcccggtccgcgcgctcctcccggcagcgccagggttctctgctcggggggcatggcgggctccgtgcttcgtcgccgccgctgccctgcggcgagttgggttttctgcgcagctatgtgacgtcagttatcgggaatcgggcagcggtggcctccggggcagggaagggtggggactggaggttcctgcttgctagccggcagttccggcggctattctccgacaagtcgaagaaaaaccacgggaagcattcggaggaggagaataaaggtaaaggggatgagagtgacaagtccgactcaaagaagcaatccagttcaggtgatcaatggaatttcgaggagagcattaaacaattcaaggacatgattgctcctttattcctttttggcctattattgttatctgcatcagcatcttcatcagagcaggagataagcttccaagaattcaagaataagttgttggaacctggtttagttgaccacattgttgtttcaaacaagtcaattgctaaggtttacgtcaggagttcaccttcaattgatcgaattcaggatagtgatatccatataactacaagtcatcttcctgggatagagtctcctagcagctacaagtattacttcaatattggaagtgttgactcctttgaagagaagttacaagaggcccagaaagcattggagatagatccacactattatgtcccaatcacttacactactgaagcaaaatggtttgaggaagtaatgaagtatgtcccaaccgttctaattattggattaatatatttgcttgggaaaaggatacaaaatggatttactgttgggggtggtcctgggaaaggaggccgtagcattttcagtattggaaaagttcaagtgacaaaattggataaaaactccaaaaataaggtgttctttaaggatgtagctggctgtgatgaagccaaacaagaaattatggaatttgttcatttcctgaaaaatcccaagaaatatgaagaactgggagcaaaaataccaaagggtgctcttcttgttggtcccccaggcacaggaaagactctccttgctaaagctactgcaggagagtctggtgtgcccttcttgtctatttctggttcagacttcatggaaatgtttgttggtgttggaccatccagggtgcggaacttatttcaagaagctcggcagtgttcacctagtattgtattcattgatgaaattgatgcaatcggccgtgctagaggccgtggaggtttttctggtggacatgatgagcgtgaaagcacattgaaccagttacttgtagagatggatgggtttggaactacatctggtgttgttgttcttgctggtaccaataggcctgacatcctggataaggctttgctaagaccaggaagatttgatcgtcagataagtattgataaaccagacataaagggtcgtgatcaaatatttcgcatctaccttaaaaagctgaaactggacaaggaaccatcattttattcacaaagattagctgctttgacacctggatttgctggagctgacattgccaatgtttgtaatgaggcagctttaattgctgcaagaagtgagggcacactcattacaatgcaacattttgaatctgcaattgatagggttatcggaggcttggaaaagaaaaacaaggtgattagcaagttggagcggcgaactgttgcttaccatgaatctggtcatgctgttgctggatggtttttggagcatgccgagccactactgaaggtcacaattgttcctcgtggaacagctgctttaggttttgctcagtatgtgccaaatgacaatcttttgatgactaaagagcagctttttgacatgacctgcatgacactaggtggccgagctgctgaggaggtcttgattggaaagatctcgactggtgcacagaatgatctggagaaagttactaagatgacttatgcccaggttgcagtatatggcttcagcgaaaaggttggccttctttctttccctcaaagggaggatggttttgagatgagcaaaccatatagcagccagacggcatccatcattgacactgaggtgagggaatgggtcgctaaggcctatgaaaaaactgttgagcttataaaacaacataaagatcaagttgcacaaatcgccgagctgctgcttgagaaagaggttctccaccaggatgatcttgtccaggttctaggggaacgcccattcaagacactcgagccaactaattatgatcgattcaaacaaggttttcaagatgaagacagcaataggaatgctgaattgtcaaatgcagatggagcatcatcccttggagaggctgtggcatcataa</cdnaseq>|
| |
| − | AA = <aaseq>MSLSSLSRALARSARSSRQRQGSLLGGHGGLRASSPPLPCGELG FLRSYVTSVIGNRAAVASGAGKGGDWRFLLASRQFRRLFSDKSKKNHGKHSEEENKGK GDESDKSDSKKQSSSGDQWNFEESIKQFKDMIAPLFLFGLLLLSASASSSEQEISFQE FKNKLLEPGLVDHIVVSNKSIAKVYVRSSPSIDRIQDSDIHITTSHLPGIESPSSYKY YFNIGSVDSFEEKLQEAQKALEIDPHYYVPITYTTEAKWFEEVMKYVPTVLIIGLIYL LGKRIQNGFTVGGGPGKGGRSIFSIGKVQVTKLDKNSKNKVFFKDVAGCDEAKQEIME FVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEM FVGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVE MDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLK LDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGG LEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPND NLLMTKEQLFDMTCMTLGGRAAEEVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKV GLLSFPQREDGFEMSKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAEL LLEKEVLHQDDLVQVLGERPFKTLEPTNYDRFKQGFQDEDSNRNAELSNADGASSLGE AVAS</aaseq>|
| |
| − | DNA = <dnaseqindica>4666..5130#4364..4591#3058..3825#2406..2888#1128..1255#531..599#246..450#71..133#gggatcaaaaccctaatacggcccgcccccgcctcgatctccgtccaatgcgctcgccgccgccgccgccatgagcctctcctccctctcccgcgccctcgcccggtccgcgcgctcctcccggcagcgccaggtgagtgcccgagccgcaccccctccccttcccctctccgattggtgtggcttcttcctgcgcgtcctcgccctaatggctcgggcggcgtgtgcggatgtcgttgccgtagggttctctgctcggggggcatggcgggctccgtgcttcgtcgccgccgctgccctgcggcgagttgggttttctgcgcagctatgtgacgtcagttatcgggaatcgggcagcggtggcctccggggcagggaagggtggggactggaggttcctgcttgctagccggcagttccggcggctattctccgacaagtcgaagaaaagtaagctttctggctggttaggtggtttttggggatatctggtgactctgttaatatttaacgttgccttttttattcagaccacgggaagcattcggaggaggagaataaaggtaaaggggatgagagtgacaagtccgactcaaagagtaagtgcttattttaacctgcattcctcgctcttgtgttggatatggtttattaaggtgttgagctttgcaaaatattttgaaagagagtagacttttacataccagtggcgacttaaccttccgagtgctgccctaaaatcatgctatatcataacttgtgatttctagttttagtatactgataatagaaaacaatgttaagaagatgatatgcagagcttttgtaagtggcaatacatgttaaacagagtggggctagttgatgttttattttattgcacaaatacccctaacagtatgtaagtatcatgtatagctgaaaatgctaatatttgagttttagtgcctcataaactgcccgctcacctttaagggagaggtactagcatgagtattgtggaatacgacaacatgagcctttagcccaaagcaagttggttgcgtacaatttgtaaagtttgatgcatccgtatatagcattatactgcaaaccacatacttaatgtggtcatttctggtgtgcagagcaatccagttcaggtgatcaatggaatttcgaggagagcattaaacaattcaaggacatgattgctcctttattcctttttggcctattattgttatctgcatcagcatcttcatcagagcaggaggtctgttcctactgaaaaaccgactgttaaacatgagcaacagtagtggcttgtgtgtttcattgtcattttacctgttcacacttgtggatagaagatagctgttatcaaaatccccatttactttactgaaggtcctcgcctttggtcagccttataaatttcagaaaagaatcattccaattctgtgtggtatataaattttgtcagtgttcattttgctgcagtccaattagagaggtgatatgaggttatatataaggttactttttttatcttgaaaaaaatatttggtggtttcgctggcctagcaaagtggtaaggaaaaaaaaattatgctttcacatgtagtccttagtttatgttttatttgtacataacacaattgatgataattaattagctgcccccctccattcctaaataattttcactatactattcatatcctaagtttgacttctcatattttatcaagaaacttgtaaatatttaaaagtatactccctccatccctagatgtaagggattctagctatgaatctggacacgtgcatgtccagatccatatatttatagccagaattccttaaatttagagacagagggagtactatattatgaaattatattacatgctaaatatgatcatactgttttcattcatcaaaacatgatatatatatatatttttaaaaaagttgtggtcaaagttgtaacagcaccggttaatggtgacaagcaaatgtaaacagagggagtatgactgaagttatggttgactgaaaagatttaaatcacatagttgtactgatggagatggtatgcttttgctcgagagcattaatgtgattatttggtgcagcatgtgaccctagctacagtacttcattactgatggcatatcatatcctatcctaagagtttgatatagggcattttagcatgagcttcgtatgttgttagtgccatgttggtatgaaatgcaatatggttggtattctacatcctattaatcatctaatcctgtataactatatcatatatccacacttcagttccctaccagtttctttttctgtgcgacacatacattcatttcctagtccattataacttgtgatacccacttaattgtaattcttttcagataagcttccaagaattcaagaataagttgttggaacctggtttagttgaccacattgttgtttcaaacaagtcaattgctaaggtttacgtcaggagttcaccttcaattgatcgaattcaggatagtgatatccatataactacaagtcatcttcctgggatagagtctcctagcagctacaagtattacttcaatattggaagtgttgactcctttgaagagaagttacaagaggcccagaaagcattggagatagatccacactattatgtcccaatcacttacactactgaagcaaaatggtttgaggaagtaatgaagtatgtcccaaccgttctaattattggattaatatatttgcttgggaaaaggatacaaaatggatttactgttgggggtggtcctgggaaaggaggccgtagcattttcagtattggaaaagttcaagtgacaaaattggataaaaactccaaaaataaggttagtttttatttgctatttccatctcttgctattttgaacaaaacatgaaattcatatccttttttgtaaatgtttgttctgtagctttattcaccattgacaaagaacatacaataacatattcatataattctactgaagtaaccttgtttcttgtgtgctacaggtgttctttaaggatgtagctggctgtgatgaagccaaacaagaaattatggaatttgttcatttcctgaaaaatcccaagaaatatgaagaactgggagcaaaaataccaaagggtgctcttcttgttggtcccccaggcacaggaaagactctccttgctaaagctactgcaggagagtctggtgtgcccttcttgtctatttctggttcagacttcatggaaatgtttgttggtgttggaccatccagggtgcggaacttatttcaagaagctcggcagtgttcacctagtattgtattcattgatgaaattgatgcaatcggccgtgctagaggccgtggaggtttttctggtggacatgatgagcgtgaaagcacattgaaccagttacttgtagagatggatgggtttggaactacatctggtgttgttgttcttgctggtaccaataggcctgacatcctggataaggctttgctaagaccaggaagatttgatcgtcagataagtattgataaaccagacataaagggtcgtgatcaaatatttcgcatctaccttaaaaagctgaaactggacaaggaaccatcattttattcacaaagattagctgctttgacacctggatttgctggagctgacattgccaatgtttgtaatgaggcagctttaattgctgcaagaagtgagggcacactcattacaatgcaacattttgaatctgcaattgatagggttatcggaggcttggaaaagaaaaacaaggtattttttacggtgccaattttcatttgcctctactagttgatttatcaaattttacataagaattttgcaacctggctgccaaactatccagtatccacaatgctgctaggctacgagtacataaataaacaaaattgttgcaaatactttgttgttgggctgccatactttttgttttatcaattcaggaggtagcaaattttattatatatatgttaaacaatatcggcttggtcaatgttgtcaattctatatgagaactgcttataactgttttttcttaaattgcaaataattgctatattttattcttgatgtgactgaggcgcactttgaaaccttcacatttgctttgagagcctaggttggtttgtacaattttaaaagtgatttcagtgttctctttgttacttgttacagcagaaatcattgcataattaagtgctgttgcattggatgtaaagtattatatggggcatgaacaattggacattcatgtgtagcggttatgtacttatcaatctgtccaccacaggtgattagcaagttggagcggcgaactgttgcttaccatgaatctggtcatgctgttgctggatggtttttggagcatgccgagccactactgaaggtcacaattgttcctcgtggaacagctgctttaggttttgctcagtatgtgccaaatgacaatcttttgatgactaaagagcagctttttgacatgacctgcatgacactaggtggccgagctgctgaggaggtacacaacattttctaacttatcagtagagtttattcttaagcaaatgacttaattatgtgattttttttcaggtcttgattggaaagatctcgactggtgcacagaatgatctggagaaagttactaagatgacttatgcccaggttgcagtatatggcttcagcgaaaaggttggccttctttctttccctcaaagggaggatggttttgagatgagcaaaccatatagcagccagacggcatccatcattgacactgaggtgagggaatgggtcgctaaggcctatgaaaaaactgttgagcttataaaacaacataaagatcaagttgcacaaatcgccgagctgctgcttgagaaagaggttctccaccaggatgatcttgtccaggttctaggggaacgcccattcaagacactcgagccaactaattatgatcgattcaaacaaggttttcaagatgaagacagcaataggaatgctgaattgtcaaatgcagatggagcatcatcccttggagaggctgtggcatcataacttggacagaattgtaggtgtatatcgcatgtttgctgaacagattattaatatttctgaggcatgagaagctgtataaaggtgttcatatgccaagttatggctattttgctagattgcgatttccacttcgcgcaggcgttcaatctgttgaatctgccgataactagtggttcagttcatgaattttcagaaatttacttgacgatttgatctctgttcctgtaaggctgtaacctagcactagggcatgagaagttgtataaaggtgttcgtggtttttctg</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051309.1 RefSeq:Os01g0842600]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
This gene encodes FtsH protease 3 (OsFtsH3), homologue of AtFtsH3/10.
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
