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| Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| |
| − | GeneName = Os05g0458400|
| |
| − | Description = Similar to AAA-metalloprotease FtsH|
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| − | Version = NM_001062280.1 GI:115464290 GeneID:4339002|
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| − | Length = 5798 bp|
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| − | Definition = Oryza sativa Japonica Group Os05g0458400, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| | | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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| − | AP = Chromosome 5:22564129..22569926|
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| − | CDS = 22564340..22564406,22564498..22564728,22564835..22564909,22565567..22565700,22566145..22566630<br>,22566810..22567577,22568323..22568550,22569250..22569729|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008398:22564129..22569926
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008398:22564129..22569926
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgagcctcgcctcgctcgcccgcgcgctctcccgccgctccgcgccctcctcctcccgcgcgcgccagggtttctccctcggtgggctaggtgggaccaccaggtcgccgccgccgccgtcgtcgccgctcccatcgctccatggcggggagggcggtgggctgggattgggattcgtccgcgggtacctgacggcggcgctggggaggcccgccgcggtgaaggctgggacagactggaggtccatcctcgcgaacccgcagttccggaggctcttctctgacgggtccaagaagaattacgagaactactaccccaagggcaagaaggaggcgccgaagggggatgggagtaacaagtctgattcgaagcaagattcaagtacagacgatcaatggaatttccaggagactgcctcaaagcaattgcaaaattttctggcacctctactgtttcttggactgatgctctcgtccttgtcgtcgagctcatcagaccaaaaggagataagcttccaggaattcaagaataagctactagaacctggtttagttgaccgcattgttgtttcaaataaatcagtggcaaaggtctatgtcaggagttcaccacagtcgaacagccaaggtcagaacactgatgccatcattaccaccaatgatgttccgagcaagcatactcccagcagatacaagtattacttcaatattggaagtgttgattcctttgaagaaaagttagaggaagcccaggaagctttgggagtagatccacatgattttgttccagtaacttatgttgctgaagtgaattggttccaagaagtaatgagatttgccccaacagtctttcttgttgggctaatatatttgatgagcaaaagaatgcagagtggttttaatattggaggtggacctggcaagggtggccgtggtatttttaatattggaaaagctcaggtgacgaagatggacaaaaattccaaaaacaaggtgttttttaaggatgtagctggttgtgatgaagctaagcaagaaataatggagtttgtgcatttccttaagaatcccaagaagtatgaagagttaggagctaagataccaaaaggtgccttgcttgtgggtcctcctggaacaggcaagactctgcttgccaaagctacagcaggagagtctggtgtgcccttcctgtctatttctggatcagatttcatggaaatgtttgttggggttggaccatccagggtacggaacttattccaagaagctcggcaatgtgctcccagtattatatttattgatgagatcgatgcgattggtcgtgcaagaggccgtggagggttttctggttcaaatgatgagcgtgaaagtactttgaaccagctgcttgtagagatggatgggtttggtacaacttctggtgttgttgttcttgctggtacaaataggcctgatattttagataaagccttgctaaggcctggaagatttgatcgccaaataacaatagacaagccagatataaagggccgtgatcaaatattccgcatatatcttaaaaaacttaaacttgacaatgagccatcattttattcgcaaaggctagcggctttgacacctggatttgcaggagctgacattgccaatgtttgtaatgaagctgctttaattgctgcgagaagtgaggaaactcagattaccatgcaacattttgaatctgcaattgatagaattattggtggtttggagaagaaaaacaaggtcatcagcaaactggagcgccgcactgttgcttaccatgaatctggtcatgctgttgctggatggtttttagagcatgcagagcctcttctgaaagttacaattgttccccgtggaacagctgctttaggatttgcacagtatgttccaaatgaaaatcttttgatgacaaaagaacagctttttgatatgacatgcatgacattaggtggccgagctgcagaggaggttttgattggaaggatctccactggtgctcagaatgacctggagaaagttaccaaaatgacctatgcgcaggttgctgtatacggtttcagcgaaaaggttgggcttctgtccttccctcagagggacgatggctttgaaatgaccaaaccttacagcaaccaaacagcatccatcatcgacgatgaggtgagggaatgggttggcaaggcgtacaaaaaaacagtggaactgataactgagcacaaggagcaagtcgccaaaatcgctgaaatgctgcttgagaaggaggtcctccaccaggacgatttggttagggtattaggagaacggcctttcaaggcatccgagccaactaactacgacctcttcaagcaagggttccaggatgaagaagacagcaagaaccaagaggcggccaaaacccctcagcctgatgatgacggaacaccctcgcttggcgaggttgtacccacgtaa</cdnaseq>|
| |
| − | AA = <aaseq>MSLASLARALSRRSAPSSSRARQGFSLGGLGGTTRSPPPPSSPL PSLHGGEGGGLGLGFVRGYLTAALGRPAAVKAGTDWRSILANPQFRRLFSDGSKKNYE NYYPKGKKEAPKGDGSNKSDSKQDSSTDDQWNFQETASKQLQNFLAPLLFLGLMLSSL SSSSSDQKEISFQEFKNKLLEPGLVDRIVVSNKSVAKVYVRSSPQSNSQGQNTDAIIT TNDVPSKHTPSRYKYYFNIGSVDSFEEKLEEAQEALGVDPHDFVPVTYVAEVNWFQEV MRFAPTVFLVGLIYLMSKRMQSGFNIGGGPGKGGRGIFNIGKAQVTKMDKNSKNKVFF KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSG SNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDI KGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQI TMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVP RGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVLIGRISTGAQNDLEKVTK MTYAQVAVYGFSEKVGLLSFPQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVE LITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGERPFKASEPTNYDLFKQGFQDEEDSK NQEAAKTPQPDDDGTPSLGEVVPT</aaseq>|
| |
| − | DNA = <dnaseqindica>212..278#370..600#707..781#1439..1572#2017..2502#2682..3449#4195..4422#5122..5601#ggtaaaacgccttctccccctcctcttccgccgccgcggcgatccctctttcacctccacctccacctgctcaggacgcggccacgcagtagtcgcggagaaaagaaaccgaaaagaaaaaaaaaaatctagctacgcatctcggcccggcccccccgccgccgcgcgctcggatcccccgacggctcgccgccacggcgccgccgccgccatgagcctcgcctcgctcgcccgcgcgctctcccgccgctccgcgccctcctcctcccgcgcgcgccaggcaagtctccgccctctccctcttatcttccctgaatcttccgccaccgcgtctgggtggggggctgattgtgtggatggcttttttttagggtttctccctcggtgggctaggtgggaccaccaggtcgccgccgccgccgtcgtcgccgctcccatcgctccatggcggggagggcggtgggctgggattgggattcgtccgcgggtacctgacggcggcgctggggaggcccgccgcggtgaaggctgggacagactggaggtccatcctcgcgaacccgcagttccggaggctcttctctgacgggtccaagaagagtgagtcccatccgcccttttttgatcggttcggatggatggctttaggtgctaaaagtttgtggttgtgtttttgtgtgtgtgtgtgtatttttatgatttttagattacgagaactactaccccaagggcaagaaggaggcgccgaagggggatgggagtaacaagtctgattcgaagcgtaagttgccgtcttttttttctcggttgcatcatttgtttgtgtggagaatggtgatcatgttgtgaaattaatagaatgcactgcacagcttttaatacaatagcatgtaactggtgtactgattgtcattgaaccaacgaggtgaataatcaggacatgttatttttcttgcgctgcaagtgcttggtcgactgatgccaaatggaaaaatagcttgtgtagtgcaaccaatgatggcttgtgagcctatggtgtacaaccacttacttgtcagtgttcttaaaaaacgaatgcaaactagatccttgttcagttttaaaaaaatgcagggatacactgtaatttagtataaaaactcagaacctcagtggttatctaacttaagaggctgaaccgctgaaccaaataaacacagtagcacagaaagttccagattttggtctttgctagatcgttagttctctggaaattaaaacgtgccgctgacctagcactttcatcttaataatttctttgggagattagtacgggttttgatggagattggagcctagattttagtggctggaatgccaagagtccttttgagggcaacaaaataataaactcttagtgcatcattgcgtgtgggctaatgtctggtttgatatgcagaagattcaagtacagacgatcaatggaatttccaggagactgcctcaaagcaattgcaaaattttctggcacctctactgtttcttggactgatgctctcgtccttgtcgtcgagctcatcagaccaaaaggaggtaatttttcactcccttctgagttctgacagattatattcacttgttctgctatgcacatgaatctcttcctatatactagaaaaaagtggatggaagaaaactatgttgcgattataaggactataaaagttgtacttaccccaatcaaattactgcaatcagctattgagcattctgtaataaatagttcaatacaagcagtactagatccagatggcagcaatacattcttctcaccgtgaagttttatcttaaactgacaaatggtagagaaaatacctgccgctcctctttagatggtttcaccttatgcctgcaccagtcaacatatagcagacaactgattttgtggttgcatatttattctttttaaatctatggtgaacaattattctcgatcttaaatggaatctcaagatattttgcttcaaatttctgcagataagcttccaggaattcaagaataagctactagaacctggtttagttgaccgcattgttgtttcaaataaatcagtggcaaaggtctatgtcaggagttcaccacagtcgaacagccaaggtcagaacactgatgccatcattaccaccaatgatgttccgagcaagcatactcccagcagatacaagtattacttcaatattggaagtgttgattcctttgaagaaaagttagaggaagcccaggaagctttgggagtagatccacatgattttgttccagtaacttatgttgctgaagtgaattggttccaagaagtaatgagatttgccccaacagtctttcttgttgggctaatatatttgatgagcaaaagaatgcagagtggttttaatattggaggtggacctggcaagggtggccgtggtatttttaatattggaaaagctcaggtgacgaagatggacaaaaattccaaaaacaaggttagttcattctcttcttctgttctactttgaaacgactgtcaaatatgaaatatatacatgcacattgattctcaagctctgctagttccacctattcaataatgcagtagctactgcttaaacgttgttaagttacaataaaaactgtataatgacaagcttttctgttggtccaggtgttttttaaggatgtagctggttgtgatgaagctaagcaagaaataatggagtttgtgcatttccttaagaatcccaagaagtatgaagagttaggagctaagataccaaaaggtgccttgcttgtgggtcctcctggaacaggcaagactctgcttgccaaagctacagcaggagagtctggtgtgcccttcctgtctatttctggatcagatttcatggaaatgtttgttggggttggaccatccagggtacggaacttattccaagaagctcggcaatgtgctcccagtattatatttattgatgagatcgatgcgattggtcgtgcaagaggccgtggagggttttctggttcaaatgatgagcgtgaaagtactttgaaccagctgcttgtagagatggatgggtttggtacaacttctggtgttgttgttcttgctggtacaaataggcctgatattttagataaagccttgctaaggcctggaagatttgatcgccaaataacaatagacaagccagatataaagggccgtgatcaaatattccgcatatatcttaaaaaacttaaacttgacaatgagccatcattttattcgcaaaggctagcggctttgacacctggatttgcaggagctgacattgccaatgtttgtaatgaagctgctttaattgctgcgagaagtgaggaaactcagattaccatgcaacattttgaatctgcaattgatagaattattggtggtttggagaagaaaaacaaggtaatgtgaatatgtgattatgtgccagtttgaagataatctactccaaactgttaaagcaataaatgcaacctgcaaagctgattagtgcctgatttacacattactccagcattgtgtagttctgtatagtgctctcatgtgaaccggttatgctctattttgatacacattttttgctggtttaatgactatggaagttttgtttttttaaaaaaacaaaaacaaaagaacggtacataatgactagtgcattcattaagttcctgttctaggtggaccttaattaagttaagtgatttgtgaatgtggcatgatagttcgtgtagatcactagatggttgatcatgcatgaatgtttaggtgagagtgctgtaaacaaggtaaactatataaaataagtagtggatctacatgcaaatataaaaaactctaggtcttactcagaaatggatggtcacttaagtgtacgcaaaataatgatttctgaaatttgtggctttgcacacacaatatctgcagtatgtttcccttttggaatgcccaagccataactgttttttcacctttaacttgttccatagtaaatatataaaatatctactttcagtaagggagtaatgcacagatcaatgcttagtaacttagtaactttcttttatatgaaatgacttgttctcaacatgtgatagtcatgtttccccatttatttttcttacctcttagcctgttaatcaaattgcaggtcatcagcaaactggagcgccgcactgttgcttaccatgaatctggtcatgctgttgctggatggtttttagagcatgcagagcctcttctgaaagttacaattgttccccgtggaacagctgctttaggatttgcacagtatgttccaaatgaaaatcttttgatgacaaaagaacagctttttgatatgacatgcatgacattaggtggccgagctgcagaggaggtacacactaattcttttacagtcttatgactgatttatgttaatagctaccttttgtggatatatctttcaaattcctactgctgagtgctgacacaccatttcttttcagtcttcttatgacagcatgcgtgttatgtttttatgactagaacgaatacaaggtttttctgcatttgacagctgtaaaaaaattaaaaaaaaatggttaactaggttacagtttacacattcaattatgatgacttggtgaatacgagtaatattatcacaatttggtagtcaaactcttgttggtttggttacatcaagacttctaaccatttatgactctaaccagaaaggcaaattgatgtttgtgtgtcttcatattacactgttggttagcatgaattctttgatgtttaacatggtactttctttttttgcttggaccatatgcttatgtacggcgagactcgacatggattgccgtcatgccatttgattactttaacatcggtcctctctcattattttcagcttcttccatacattttacttattgtcatataacataatgaaataacaataagccaatccaagtgctgggttgtggtatttgttcattccatatttccatgattacgctgtcaaatcgttcacaatgttggcagtggaatgatacctaatgtagatgttttgattgccttgttacaggttttgattggaaggatctccactggtgctcagaatgacctggagaaagttaccaaaatgacctatgcgcaggttgctgtatacggtttcagcgaaaaggttgggcttctgtccttccctcagagggacgatggctttgaaatgaccaaaccttacagcaaccaaacagcatccatcatcgacgatgaggtgagggaatgggttggcaaggcgtacaaaaaaacagtggaactgataactgagcacaaggagcaagtcgccaaaatcgctgaaatgctgcttgagaaggaggtcctccaccaggacgatttggttagggtattaggagaacggcctttcaaggcatccgagccaactaactacgacctcttcaagcaagggttccaggatgaagaagacagcaagaaccaagaggcggccaaaacccctcagcctgatgatgacggaacaccctcgcttggcgaggttgtacccacgtaatcctgcagcaaatttacagctgtaaattgcactcctattcgatagattcttgtttgttgttgcagcataagaaaatttgtataaattaacgccctcgcctaatctctgatgtgggaacccagttggcttttcgccggccatagtgtttccctgttttaaatgaatacgaagagctagtcgaggatcatgatttgagc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062280.1 RefSeq:Os05g0458400]|
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| − | }}
| |
| | [[Category:Genes]] | | [[Category:Genes]] |
| | [[Category:Japonica mRNA]] | | [[Category:Japonica mRNA]] |
Latest revision as of 07:39, 12 June 2015
This gene encodes ATP-dependent zinc metalloprotease FTSH 8, mitochondrial, homologue of AtFtsH3/10. It is a predicted gene base on homology comparison.
Annotated Information
Function
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Expression
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Structured Information
