Difference between revisions of "Os04g0588700"
(Created page with "{{JaponicaGene|
GeneName = Os04g0588700|
Description = ABC transporter, transmembrane region domain containing protein|
Version = NM_001060231.1 GI:115460191 GeneID:4336810...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0588700| | GeneName = Os04g0588700| | ||
Revision as of 19:58, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0588700 |
|---|---|
| Description |
ABC transporter, transmembrane region domain containing protein |
| Version |
NM_001060231.1 GI:115460191 GeneID:4336810 |
| Length |
7181 bp |
| Definition |
Oryza sativa Japonica Group Os04g0588700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:30153450..30160630 |
| Sequence Coding Region |
30153507..30153582,30154939..30156686,30156973..30157059,30157352..30158017,30158180..30158344 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:30153450..30160630 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:30153450..30160630 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ggacaatctctagtcgaaacagtagctgaagccaacggcttcaacatggtgtacaaagaaactgcaaatcaatcagggatccaattcacctgcggcacacaagaaccatttccagatgcttcaaaagaagaaaatgtgaaaaacaggaggaaatcttcttatggagaggcaactatttcacaacatttcactttctcttggatgaatggtcttcttgctaaaggtgccaataagcctttgaatgaggatgacataccagatgttggtgaggaggaaagtgcccaacacatctccagaatattcagtaatatcattgtgaaagggaattttcctctgacagtttcatcgatttgtaaagcagccttccttctcatttggaagaaggcggcactcaatgcaacctttggagtcctaagtgtagtcgcctcctttgtgggggcatacttaatcaaggacttcgtgggctatctaagtggagataatggatttgaaagaggctactctcttgttcttgtatttgtaggtgcgaaggctattgaaactcttgcttacagacaatggttctttggaagtctacaggtttatttgcgcctaagaacatctctgatatctcaggtataccaaaaggtcctttatttatcaagccagtcaaggcagaaacatacctcaggggagataattaactatgtgagtgttgacatcgagaggattgttaatgttgcatggtatgtgaacatggtcttcatgatgcctatacagattacactagcaacttatattctttggaaaaatcttggtctgggttctttagctggaatagcaacaacagccataataatgctttgcaatattccttttacaagaatccagaaaagattgcacgcaggaattatgaaagcaaaagatgacagaatggacatgacatctgaagttataagaagcatgaagatcttaaaacttcaagcttgggatatccaataccttaggaaattggaatatttgaggaaaggagaacatttgtggttgtgggaatttctaagactaaaagcactactagcatttatgttctggggagcacccgctgtcatatcaatcatgacatttgcttcatgcattctgatgggaatccctctaacagctggaagagtgttgtccacactagcaactgtgaatatactgaaggagcctatctttagtctaccagaattgcttactgcctttgcacaggggaagatctcagctgacagaatagtgtcatatctccaagaagaagaaataagatctgatgcaattgaggaagtagcaatagacgaaaatgaattttctgcagagattgatcagggagcattcagttggaaaactgatgcaaaaatcccaacacttcaagatatacatgtaaagatacacaaagggatgaaagtggcagtatgtggagctgttgggagtggaaaatctagcctgttgtcatgtgtacttggagagatgccaaaagtgcaaggaacggttaaggtctttggaaccaaagcatatgttccacagtcgtcatggatactttctgggactattagagaaaacattctctttgggagcccatttgaaactgataggtatgagcggacaattgaagcatgtgccttggttaaagacatcggagttttctcggatggtgatatgacagatataggagaacggggaacgactatgagtgggggacaaaagcaacggattcaaatagcaagagcagtttacaaggatgctgatgtctacctgtttgatgatcctttcagtgctgtagaccctcaaactgggaggcatctatacaagaaatgcctgatgggggtcctaagggataaaactgtgttatacgtcacgcaccaagttgaatttctagttgatgcagaccttattatggtgatgcaaaatggaaggatagcacaagcagggaaatttcaagaactccaacagaacatggcttttggagttatctttggggctcacttttgtgccgtcgaacaagtttgtaacgcaaaaggcacaagcatatatttgtcaaagcatcatgcagaatcagaaaaggtaccaagcatcaatgagtccgatgcagaaaaggaaatcagcagcaaatggcaaaacacaaatatgataaattgcagacaagaagtatttagagataacactgaagaagggaaattgctgcagggtgaagaaagagagaatggatacattagcaagcaagtgtattggtcatacctcacagctgctcgaggtggtcttttcattcctatgataattgcagcacaatgcttctttcagatatttgaagtgggaagcaactattggatggcatcagcttgccatccacgaactggaagcaaatcaaaaatggaatccacccagttcatggtatatgtatttatatcagttggcagcgccttgtgtatcttgattcgagcagttcttgtagctgtaaccggcctcctcacatcagaaaaattgttcaagagcatgatgcattgcatctttcatgctcctatgtctttctttgactcgacacctacagggcgaatcttaaacagggcttcgattgatcaaagtgtgctagatttggagacagcgtcaacattaagtgagagcacattttcagtgatgcagtttctaggaacaatactaatcatatcatatgtttcctggccagttctcattatttttattccatcaatattgatttgcatcaggtatcagagatattacagtctaacagcaacagaattagctcgcctatcaggaattcaaaaggctccaattcttcatcattttggggaaactttctatggagctgcaataattcgagcatttcgccaagaagaccggttctacagatcaaatctgagtctacttgacaatcattcaagaccatggtttcacttgatggctgcagtagaatggctctctttcagaatgaatttgttatgcaactttgtctttgggttctcgttggttttgcttgtgcgtcttccacaaggttttgttaatccaagcattggtgggctggtagtgatgtatgcatggaatttgaatacacaattatcagaagccacccggaatataagtcgtgcagaagcaaacatgatatcagttgaaagaatattacagtacacaaagcttccaagtgaagccccaaccataaccgagggtagcaagccaccaatggcatggccagagtttggcatgataagcataagcaacttagaggtcagatatgcagaacatctcccttcagtattaaaaaacataacttgtgtgattccagctgagaaaacagtaggtattgttggacgcacaggtagtgggaagtcaaccttagtacaagtactttttcggattgttgagccaagagaagggaccatcaagattgacagcatcgacatctgcaaaattggacttcatgatctgagatcgagaatatgtattctcccacaggatccggtgatgttcgatggtacaatcagaggaaatcttgatcccatgaacgagtacccagatagtaggatatgggaggtagtagacaagtgtcagcttggcaatgtggtgcgctcgactgagaaaaagctggatgaaatagtaattgaaaatggggacaactggagcatgggacagcgacaactattttgtttaggcagaattctcctgaggaagagcaagatactagtccttgatgaggcaactgcttcagttgactctgctacagaccggattattcaagagataattcgtcaagaattcaaagattgcacagtgcttgcaattgcccataggatgaacactgttattgatagtgaccttattcttgttcttggtgaaggtagtattttagaatacgacacccccaccaaactgctccagagagaggactctacattctctaagctaaccaaagagtactcacaacaatcgcagcacttcaagtcttcaacggcaatgcacaggatgggtagctactaa</cdnaseq> |
| Protein Sequence |
<aaseq>GQSLVETVAEANGFNMVYKETANQSGIQFTCGTQEPFPDASKEE NVKNRRKSSYGEATISQHFTFSWMNGLLAKGANKPLNEDDIPDVGEEESAQHISRIFS NIIVKGNFPLTVSSICKAAFLLIWKKAALNATFGVLSVVASFVGAYLIKDFVGYLSGD NGFERGYSLVLVFVGAKAIETLAYRQWFFGSLQVYLRLRTSLISQVYQKVLYLSSQSR QKHTSGEIINYVSVDIERIVNVAWYVNMVFMMPIQITLATYILWKNLGLGSLAGIATT AIIMLCNIPFTRIQKRLHAGIMKAKDDRMDMTSEVIRSMKILKLQAWDIQYLRKLEYL RKGEHLWLWEFLRLKALLAFMFWGAPAVISIMTFASCILMGIPLTAGRVLSTLATVNI LKEPIFSLPELLTAFAQGKISADRIVSYLQEEEIRSDAIEEVAIDENEFSAEIDQGAF SWKTDAKIPTLQDIHVKIHKGMKVAVCGAVGSGKSSLLSCVLGEMPKVQGTVKVFGTK AYVPQSSWILSGTIRENILFGSPFETDRYERTIEACALVKDIGVFSDGDMTDIGERGT TMSGGQKQRIQIARAVYKDADVYLFDDPFSAVDPQTGRHLYKKCLMGVLRDKTVLYVT HQVEFLVDADLIMVMQNGRIAQAGKFQELQQNMAFGVIFGAHFCAVEQVCNAKGTSIY LSKHHAESEKVPSINESDAEKEISSKWQNTNMINCRQEVFRDNTEEGKLLQGEERENG YISKQVYWSYLTAARGGLFIPMIIAAQCFFQIFEVGSNYWMASACHPRTGSKSKMEST QFMVYVFISVGSALCILIRAVLVAVTGLLTSEKLFKSMMHCIFHAPMSFFDSTPTGRI LNRASIDQSVLDLETASTLSESTFSVMQFLGTILIISYVSWPVLIIFIPSILICIRYQ RYYSLTATELARLSGIQKAPILHHFGETFYGAAIIRAFRQEDRFYRSNLSLLDNHSRP WFHLMAAVEWLSFRMNLLCNFVFGFSLVLLVRLPQGFVNPSIGGLVVMYAWNLNTQLS EATRNISRAEANMISVERILQYTKLPSEAPTITEGSKPPMAWPEFGMISISNLEVRYA EHLPSVLKNITCVIPAEKTVGIVGRTGSGKSTLVQVLFRIVEPREGTIKIDSIDICKI GLHDLRSRICILPQDPVMFDGTIRGNLDPMNEYPDSRIWEVVDKCQLGNVVRSTEKKL DEIVIENGDNWSMGQRQLFCLGRILLRKSKILVLDEATASVDSATDRIIQEIIRQEFK DCTVLAIAHRMNTVIDSDLILVLGEGSILEYDTPTKLLQREDSTFSKLTKEYSQQSQH FKSSTAMHRMGSY</aaseq> |
| Gene Sequence |
<dnaseqindica>58..133#1490..3237#3524..3610#3903..4568#4731..4895#4992..5286#5418..5632#5747..6052#6334..6397#6526..6765#6853..6992#agtcccccgtgctaagttgtaagctgatttacactaatgttactgttcagcagctaaggacaatctctagtcgaaacagtagctgaagccaacggcttcaacatggtgtacaaagaaactgcaaatcaatcaggtaagattcatgctaatttttgtcatgctcatgtgaatggaatcttgctttatcgtgtgctttctactgaaatagaagtttttcaaataattattcctagtcatttataaatactttggaaggaattcctaccttccggagcagatcacaaccatttcactatgtccccacaaagatacggtagaaccagcaagttgaatagatagtattttttgggacacaatagaatcaataatactgcataagattaacctacacgtaggaattataaaggcgctccttgatggagcatttcaatacaacattatcacaagaagaaaatgatatatagaacacaatacctgggagcagcttgatccgtctgacctgccattttgccaagctacctgagaacaaaggtgcatacatactatcacactttaatgcgaactgaaagtatgtatttgcaatacaggcattaggaatttagataagagtatttgcagaaacctgatgtttatacatacaatctcatagattctcttaactcctaaggtagatgttctaggactccttacacttcgctgcggtgtcccacatatggcgtcctccttgattagattaaaactgtactgtatgtctgcatcagaatcatagaatgttcttacgatgttagtagttctgtataaccagcatcctctgttcagttgaggtaattccccttcaccttccatcaaaatgaccgtaggtgtacaccttgaaaaatcccagatagccagacaggtgaacagtatgttacagaaattaagagcatgaagaaggcaatgggggtctagataggtcatgttttgtggctgtgtgcatttcttgcagaggtcgggagtgggctcaattagaatgtatcatcttgttgtatttgactgagttttaataaagcttccattattgagaaatgggcaacatggaaaaataacatatttcaggcttaaacttgcgatgtgcaacaacagaaaagaagaccacagctttgacgcagtttattaagtttcatataatagaatacttgagttctgaggtttttgggcctggtttcccctcaaaaactgggccaagtctcttcttctttaatgaaaacaggctctccctgtcctcttctaaggcttttcctcaaaaaaagaatacttgagttctttatgactaagcaactaaatagtgtagttcacaagttttacttggcatacgtaccataaaatgaaattaaaggtatggtttttgcaaaatggcacacttgtgtcaattatcatttgaaccagaagaaatatcagatttttttaattctccttttgtacaaatacacgtttgttcattgcaaaacagggatccaattcacctgcggcacacaagaaccatttccagatgcttcaaaagaagaaaatgtgaaaaacaggaggaaatcttcttatggagaggcaactatttcacaacatttcactttctcttggatgaatggtcttcttgctaaaggtgccaataagcctttgaatgaggatgacataccagatgttggtgaggaggaaagtgcccaacacatctccagaatattcagtaatatcattgtgaaagggaattttcctctgacagtttcatcgatttgtaaagcagccttccttctcatttggaagaaggcggcactcaatgcaacctttggagtcctaagtgtagtcgcctcctttgtgggggcatacttaatcaaggacttcgtgggctatctaagtggagataatggatttgaaagaggctactctcttgttcttgtatttgtaggtgcgaaggctattgaaactcttgcttacagacaatggttctttggaagtctacaggtttatttgcgcctaagaacatctctgatatctcaggtataccaaaaggtcctttatttatcaagccagtcaaggcagaaacatacctcaggggagataattaactatgtgagtgttgacatcgagaggattgttaatgttgcatggtatgtgaacatggtcttcatgatgcctatacagattacactagcaacttatattctttggaaaaatcttggtctgggttctttagctggaatagcaacaacagccataataatgctttgcaatattccttttacaagaatccagaaaagattgcacgcaggaattatgaaagcaaaagatgacagaatggacatgacatctgaagttataagaagcatgaagatcttaaaacttcaagcttgggatatccaataccttaggaaattggaatatttgaggaaaggagaacatttgtggttgtgggaatttctaagactaaaagcactactagcatttatgttctggggagcacccgctgtcatatcaatcatgacatttgcttcatgcattctgatgggaatccctctaacagctggaagagtgttgtccacactagcaactgtgaatatactgaaggagcctatctttagtctaccagaattgcttactgcctttgcacaggggaagatctcagctgacagaatagtgtcatatctccaagaagaagaaataagatctgatgcaattgaggaagtagcaatagacgaaaatgaattttctgcagagattgatcagggagcattcagttggaaaactgatgcaaaaatcccaacacttcaagatatacatgtaaagatacacaaagggatgaaagtggcagtatgtggagctgttgggagtggaaaatctagcctgttgtcatgtgtacttggagagatgccaaaagtgcaaggaacggttaaggtctttggaaccaaagcatatgttccacagtcgtcatggatactttctgggactattagagaaaacattctctttgggagcccatttgaaactgataggtatgagcggacaattgaagcatgtgccttggttaaagacatcggagttttctcggatggtgatatgacagatataggagaacggggaacgactatgagtgggggacaaaagcaacggattcaaatagcaagagcagtttacaaggatgctgatgtctacctgtttgatgatcctttcagtgctgtagaccctcaaactgggaggcatctatacaaggtccttttccccttaagagccaacaaaagaaaataacaccagggtcacaaaaatataatgctttgatggtttcaaattttccatagttaaaagaagtcatcatgttctctaggacaaacaatgggcatcgtatatttgagatcttgtgattattcaataatcttgtccatattattattgatatttatttctctcgctaaaataaattgctcatatctatatttttactggcaaggagaagccctgttacataaccattaacattggctctatacattttttgcagaaatgcctgatgggggtcctaagggataaaactgtgttatacgtcacgcaccaagttgaatttctagttgatgcagaccttattatggtaagcccctgaaaaaaaaactaaagacatgattgtactgaacattaggataaataatgatgactgctaaaaacatgctgtgcatatgggaatccttttagagaatttacagccctttgcaggcttgaggtgtagaggtatctcctagtgttagttttgtataactttcagtagctacacctatcagttctcatgatccacactaggagatactactacctctcaataactcataaggatcccagaaaagaaactagtatgtttaacttgactggttgaagcaatattgcaggtgatgcaaaatggaaggatagcacaagcagggaaatttcaagaactccaacagaacatggcttttggagttatctttggggctcacttttgtgccgtcgaacaagtttgtaacgcaaaaggcacaagcatatatttgtcaaagcatcatgcagaatcagaaaaggtaccaagcatcaatgagtccgatgcagaaaaggaaatcagcagcaaatggcaaaacacaaatatgataaattgcagacaagaagtatttagagataacactgaagaagggaaattgctgcagggtgaagaaagagagaatggatacattagcaagcaagtgtattggtcatacctcacagctgctcgaggtggtcttttcattcctatgataattgcagcacaatgcttctttcagatatttgaagtgggaagcaactattggatggcatcagcttgccatccacgaactggaagcaaatcaaaaatggaatccacccagttcatggtatatgtatttatatcagttggcagcgccttgtgtatcttgattcgagcagttcttgtagctgtaaccggcctcctcacatcagaaaaattgttcaagagcatgatgcattgcatctttcatgctcctatgtctttctttgactcgacacctacagggcgaatcttaaacagggtcagtccattctcctgtctcagaagtgtaaactatgtaaaataaatcctaaagaaattctatgtaaaataagtaaacatatactgcattacacaggaaagtgtaatgtgtatgtcgctttacctgagttgctaatacatgatttttgcattgttcatgtaggcttcgattgatcaaagtgtgctagatttggagacagcgtcaacattaagtgagagcacattttcagtgatgcagtttctaggaacaatactaatcatatcatatgtttcctggccagttctcattatttttattccatcaatattgatttgcatcaggtatcaggtaagagttaactgtaacttagtcagattcaaaatagtatcagtacacacaatatgcctattgagaatgaatcatatctcccataatatcctgcagagatattacagtctaacagcaacagaattagctcgcctatcaggaattcaaaaggctccaattcttcatcattttggggaaactttctatggagctgcaataattcgagcatttcgccaagaagaccggttctacagatcaaatctgagtctacttgacaatcattcaagaccatggtttcacttgatggctgcagtagaatggctctctttcagaatgaatttgttatgcaactttgtctttgggttctcgttggttttgcttgtgcgtcttccacaaggttttgttaatccaagtaagttttgacttgttcggacccatgaatttaattgaacgtaaactcatgctgttctaccgtcattcaaacttgaaggataaatatcttttttctggtataagggttgatgttctcttgctgcaaaacaggcattggtgggctggtagtgatgtatgcatggaatttgaatacacaattatcagaagccacccggaatataagtcgtgcagaagcaaacatgatatcagttgaaagaatattacagtacacaaagcttccaagtgaagccccaaccataaccgagggtagcaagccaccaatggcatggccagagtttggcatgataagcataagcaacttagaggtatggttctaaatgattagaaagaagatcataataattttatttcatactaagtatcagaggtgtacaccctttagttggcccagtaatgatattgcacatttaatcatacaggtcagatatgcagaacatctcccttcagtattaaaaaacataacttgtgtgattccagctgagaaaacagtaggtattgttggacgcacaggtagtgggaagtcaaccttagtacaagtactttttcggattgttgagccaagagaagggaccatcaagattgacagcatcgacatctgcaaaattggacttcatgatctgagatcgagaatatgtattctcccacaggatccggtgatgttcgatggtacaatcagaggaaatcttgatcccatgaacgagtacccagatagtaggatatgggaggtaagtgcagaaaacttacatgttacatcctaactagaatatatgacaaagcttttctatttgtatagacaatggttccataaatagcacaaatcatataaagcaaaaaaaatgggtaagcgtgaatagacgacaacaatatgaagtgaagatggtacagattgcgacccctatccaccagtaaatgaataagacctcaaaagcaagcatacaaactagaagtaattttagggtagatcaacagtagttttcattctgaagtaatgaactacccatgtcaggtagtagacaagtgtcagcttggcaatgtggtgcgctcgactgagaaaaagctggatgaaataggtactgctcagcattaaacttttgaaggaagacaaaaaaactgcaatgagtcctttaggaaaagaacatgttaatatgtagtttttctgaaatacttatgctactatgaatttatatttcattcgcagtaattgaaaatggggacaactggagcatgggacagcgacaactattttgtttaggcagaattctcctgaggaagagcaagatactagtccttgatgaggcaactgcttcagttgactctgctacagaccggattattcaagagataattcgtcaagaattcaaagattgcacagtgcttgcaattgcccataggatgaacactgttattgatagtgaccttattcttgttcttggtgaaggtaggtataccactacaatactaaaacaacctcagaatatcatgttgcacagctacgtcactctttaaatctgatatctctatgcaggtagtattttagaatacgacacccccaccaaactgctccagagagaggactctacattctctaagctaaccaaagagtactcacaacaatcgcagcacttcaagtcttcaacggcaatgcacaggatgggtagctactaattttcctgaagacatactacattctacatggctatattccccacgacacacctgaagtatccgcgccacagcaactcagcaaggggcagggaattgcttcgtagtccaagtaaaattttctaaatgttgcatgtaaaacctatgaatagcaaaacagcgtaaatgattaatttacagaaaaatggcact</dnaseqindica> |
| External Link(s) |
