Difference between revisions of "Os04g0595800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0595800| Description = Similar to Secretory carrier membrane protein| Version = NM_001060269.1 GI:115460267 GeneID:4336849| Length = 3609 b...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0595800|
 
GeneName = Os04g0595800|

Revision as of 19:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0595800

Description

Similar to Secretory carrier membrane protein

Version

NM_001060269.1 GI:115460267 GeneID:4336849

Length

3609 bp

Definition

Oryza sativa Japonica Group Os04g0595800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30508497..30512105

Sequence Coding Region

30508918..30508950,30509774..30509839,30509994..30510042,30510205..30510272,30510375..30510420
,30510725..30510818,30510901..30510963,30511143..30511265,30511372..30511405
,30511494..30511556,30511661..30511786,30511939..30511995

Expression

GEO Profiles:Os04g0595800

Genome Context

<gbrowseImage1> name=NC_008397:30508497..30512105 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30508497..30512105 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcacgaccccaacccgttcgacgagggcaacgccgacgacaaccccttctccaatgggggaggtggtggtggcggcggcggcagcaggcagcagtacgggttccgccccacggagcccgccggcttcggcgccggcaggggggacgccaccgtcgatgtcccgctcgacaccatgggcgactccaagagcaaggcaagggagctctcatcgtgggaaacagatctgaagcggcgggaggcggatatcaaaaggagggaggaagcgctgaggaatgctggagtgccaatggaggataagaactggccaccattcttcccgatcattcaccatgacattgccaatgagataccggctaatttgcagaaattgcagtatctcgcgttcgcaagctggcttggtatcgtgctttgcctctcatggaacttcatcgctgtcatagtctgttggatcaaggagggagattcgaagctgtttttccttgccactatctatgccttgcttggaattcccctctcgtacttgatatggtataggcctctctaccgtgctatgaggactaacagtgcgttcagttttggatggttctttctctgttacttgatccacattggcttttgcattattgctgccattgccccgccaattgtgtttcatggaaaatcattaacgggcatactggctgccatagacaccttttctgagcatgtgataattgggatcttttactttgtggggttcgcgctgttttgcttggagacactgctgagcattggagttcttcagagagtgtacatgtacttcagagggaacaagtga</cdnaseq>

Protein Sequence

<aaseq>MHHDPNPFDEGNADDNPFSNGGGGGGGGGSRQQYGFRPTEPAGF GAGRGDATVDVPLDTMGDSKSKARELSSWETDLKRREADIKRREEALRNAGVPMEDKN WPPFFPIIHHDIANEIPANLQKLQYLAFASWLGIVLCLSWNFIAVIVCWIKEGDSKLF FLATIYALLGIPLSYLIWYRPLYRAMRTNSAFSFGWFFLCYLIHIGFCIIAAIAPPIV FHGKSLTGILAAIDTFSEHVIIGIFYFVGFALFCLETLLSIGVLQRVYMYFRGNK</aaseq>

Gene Sequence

<dnaseqindica>3156..3188#2267..2332#2064..2112#1834..1901#1686..1731#1288..1381#1143..1205#841..963#701..734#550..612#320..445#111..167#accactcgccgctttacccgccgttctcctcctcctcctcctccacgcgcggcggcgaggcggagccaagccctaggaaggagcggcgcgtcaccggcggcggcggcggcatgcatcacgaccccaacccgttcgacgagggcaacgccgacgacaaccccttctccgtgagccgacactcctctcctcgcacgcttcgtttttttttggggtgattttttgtctggttactgtgtgttcgtggatcgtggagtggtggtagatctgggatttttttcgcgtgctgtttttctgatgaggtgtggctgtggcgctgcagaatgggggaggtggtggtggcggcggcggcagcaggcagcagtacgggttccgccccacggagcccgccggcttcggcgccggcaggggggacgccaccgtcgatgtcccgctcgacaccatgggcgtaagatgctttacgtgatagtgctccctcttttttcccccctcctttctcctgttgttctcgtacgcgaatctgagggttttgggggcgtgtacgctgcacaggactccaagagcaaggcaagggagctctcatcgtgggaaacagatctgaagcggcgggaggcggtgggtttttgctctccattccacttgtaaacttttgaaatgctggttgattcggtagtgtatcattgtggttttgttgtggctgcaggatatcaaaaggagggaggaagcgctgaggaatggtatgctcttgtttgactgatggtggactcagtgataattcaattgccagttgtgttaagaggagtgcgctcattttcgcattattttttttcctttttgatgcagctggagtgccaatggaggataagaactggccaccattcttcccgatcattcaccatgacattgccaatgagataccggctaatttgcagaaattgcagtatctcgcgttcgcaagctggcttggtaggtgtagattggacattgttattgcaatttgctacatcaattgtttggtagtactacattgtttgcttatctagctgagtctctggattaatcaattgtggtggtagctacggtgcgcttcaaaggcagctttgatttttctcagtatgtcctgtctgtgttattttaatctacaggtatcgtgctttgcctctcatggaacttcatcgctgtcatagtctgttggatcaaggagggaggtgggttgcatgggtttctataaatgccaaagtgtttttgtacattggctcatgcttaatggttgttgtcttatgcttgtagattcgaagctgtttttccttgccactatctatgccttgcttggaattcccctctcgtacttgatatggtataggcctctctaccgtgctatgaggtatatttttctgctttaccactctttctgttaatgtgtctttcaaagagtattatttttgttagcgcatcttgctacaggtgttatattttagttagcgcatttcagttatcttgcttatttccatcagtgcattttacagagaatgcatctcttttgcacaaaagtttatgcagacctgcactgctcctttgtggagctagtataaaacatttcagtggacctgaactatggtttgtgctgtatagttctggaaccatggctttattattgtatctgacactttcttttacttgttaaacaggactaacagtgcgttcagttttggatggttctttctctgttacttggtaagttatagctgaaaactgtttttttatgttttcttgacattacaactactgcttatcaaatggatcatatcatcttcttttcattgatatttggcacagatccacattggcttttgcattattgctgccattgccccgccaattgtgtttcatggaaaatcattaacgtaagttatatcaagtgtttgcttattaatatgcagttatttggtatttaaatattgactgatgaattatgaaattctagagctcattcttggtagtattttttgcatgttcttgtttctgagatattaatattacatgtttatttctcttttgcttatcaggggcatactggctgccatagacaccttttctgagcatgtgataattggggtgagttgaattgcctcattccatttcaaatcctcctgataaataagcaagctggatagcttttctgcaatatgttgtgtgtccagcactttgaattaaccttaaggtgccaactagtaggaaattaagtactgatgtttttcttttcttgcagatcttttactttgtggggttcgcgctgttttgcttggagacactgctgagcattggagttcttcaggtctggaacaaaatcgtgttctcataaactgatatcccctctgtcaaatgagctatcaattctatccataactcttcgagggatctgtcgccttctctgtccttatatatatgtgttttagcactagttagcttagcacaagagaagcctacgttattttagggtaaatcagggtgcacacatgaaatgaatgtaaggcagatattaacttatgaatgctctatgcatgtattaaatgcaccacatatttcttaacctctggtctgcttaaagcattaaacttgttacttctctttccatattatagatatctgcatagtagtaactaataaagtagtaatttgttgtcaggatactgaatgcatgaggaagtggtccgtattccttctgtagattattatgcattgagattagagccacagtttcaaaaaaatggaaactattgtagtaattcgctatgtaaactaaaagttaagtacttctgctttcacattgctctgcaccctttcttagtttaatttcagagctagtaaacctcgtgaatacaattcatagttcactaaaataaatgtcaaggggaagtaattttcctaatttcttggtactacaattccattgtactgcccaattttcattacctattagttagtgtccaagtttatactcaatgttaattgaagattgcttttttttttggttcctgcaagtcatcgaatacccagcttgtccatggttatgatcattacttgatttgtttgttttttaaagggtacaaaatgtgtacatttaatattttttattacttctctatcggtggatgcagagagtgtacatgtacttcagagggaacaagtgaagctattcatcatgatggaaagtttccggtgatcaccagtagcacacctcttcatgcatcgcttctgtgcatacaaatcagtacaccctgagaatgtctcttcatgtcagtttattgtgaaaccttttcaagcttgttatggggtaggttgttagcatcgttatcatagctttgtgtctggaacgaggtgttttgattcttggcaaactgtagtccgtatgtgattgggtagatcgccggtttgcctgttggttaccgttaaatgagctaaggctattctcgctcgggaaaatagacacaaaattgcattcagacctggatcatatatatgcacccttgcggattgttggcttgatgctgtgcttcccgatttttactatccatctaactcaaagcagattcatctggcacaattcgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0595800, RefSeq:Os04g0595800